Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 3.8e-304 1047.3 532 100.0
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 5.8e-284 980.3 551 91.8
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 1.7e-259 899.0 543 85.8
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 4.3e-255 884.4 543 84.9
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 6.9e-253 877.1 543 84.7
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 2.6e-252 875.2 543 84.5
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 3.1e-229 798.5 544 75.6
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 4.1e-229 798.1 544 75.2
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.2e-228 796.6 543 75.3
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 4.8e-222 774.6 461 85.9
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 1.8e-216 756.1 548 71.5
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 1.1e-215 753.4 549 71.4
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 4.1e-213 745.0 551 70.2
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 1.9e-210 736.1 554 71.1
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 1.8e-208 729.6 534 71.3
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 5.7e-207 724.5 553 70.5
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 2.0e-204 716.1 557 69.1
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 5.9e-204 714.5 544 70.4
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 6.5e-203 711.1 685 59.4
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 1.5e-202 709.9 542 69.0
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 1.5e-202 709.9 555 68.1
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 1.9e-202 709.5 551 69.3
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.2e-202 708.4 684 59.4
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 7.2e-202 707.6 549 69.2
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 4.7e-201 704.9 557 68.0
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 4.0e-200 701.8 557 68.0
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 6.8e-200 701.0 557 67.7
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 6.8e-200 701.0 550 66.2
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 8.8e-200 700.7 536 69.8
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 2.6e-199 699.1 554 67.7
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 5.7e-199 698.0 558 67.7
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 9.8e-199 697.2 555 67.6
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.7e-198 696.4 555 67.6
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 1.7e-198 696.4 555 67.6
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 2.8e-198 695.7 562 67.3
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 2.8e-198 695.7 555 67.9
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 4.8e-198 694.9 559 66.7
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 3.1e-197 692.2 554 67.9
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 3.1e-197 692.2 554 67.3
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 7.0e-197 691.0 546 68.1
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.6e-196 689.9 515 70.1
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 4.5e-196 688.3 554 67.5
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 2.9e-195 685.6 557 67.0
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 2.9e-195 685.6 535 69.3
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 8.6e-195 684.1 554 66.8
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 1.5e-194 683.3 634 62.8
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 1.5e-194 683.3 556 66.2
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 3.6e-193 678.7 602 62.1
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 5.7e-191 671.4 547 65.8
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 2.7e-188 662.5 552 65.6
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 1.0e-187 660.6 622 59.8
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 1.1e-186 657.1 561 63.5
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 1.5e-186 656.8 539 66.8
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 1.5e-186 656.8 554 65.2
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 4.3e-186 655.2 554 64.8
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 8.0e-185 651.0 557 63.6
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 1.4e-184 650.2 551 65.5
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 1.8e-184 649.8 541 65.1
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 4.0e-184 648.7 546 64.8
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 5.2e-184 648.3 609 61.2
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 3.7e-182 642.1 552 65.0
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 6.4e-182 641.3 552 65.2
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.1e-181 640.6 575 62.1
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 2.4e-181 639.4 549 63.6
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 3.2e-181 639.0 532 66.0
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 7.0e-181 637.9 575 62.3
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 2.7e-180 636.0 552 64.9
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 4.6e-180 635.2 550 64.2
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 1.0e-179 634.0 583 60.7
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 6.6e-179 631.3 559 63.7
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 3.3e-178 629.0 553 64.6
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 9.5e-178 627.5 546 64.3
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 4.7e-177 625.2 552 63.8
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 8.9e-176 620.9 540 64.4
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 8.9e-176 620.9 547 63.3
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 7.5e-175 617.8 534 64.0
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 1.7e-174 616.7 553 62.4
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 6.4e-174 614.8 509 67.6
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 1.6e-172 610.1 557 62.7
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 3.0e-171 605.9 538 63.6
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 7.3e-170 601.3 580 58.6
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 1.4e-168 597.0 564 60.1
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 2.0e-167 593.2 561 62.0
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 4.4e-167 592.0 466 66.1
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 1.9e-165 586.6 563 58.8
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 1.7e-163 580.1 557 59.8
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 8.6e-163 577.8 555 60.2
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 8.9e-160 567.8 553 59.1
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 1.2e-159 567.4 554 58.3
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 2.0e-159 566.6 560 58.0
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 4.4e-159 565.5 569 59.2
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 7.6e-159 564.7 539 58.4
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 2.9e-158 562.8 553 59.3
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 1.1e-157 560.8 533 60.4
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 2.4e-157 559.7 551 58.1
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 4.2e-157 558.9 553 58.4
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 5.4e-157 558.5 547 59.0
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 7.1e-157 558.1 451 66.3
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 9.3e-157 557.8 502 62.5
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 1.2e-156 557.4 538 59.7
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 6.9e-152 541.6 557 57.6
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 6.9e-152 541.6 557 57.6
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 3.4e-151 539.3 557 57.5
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 5.4e-149 531.9 558 57.5
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 1.6e-148 530.4 558 57.3
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 1.3e-137 494.2 424 63.7
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 3.2e-133 479.6 563 52.9
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 2.5e-130 469.9 587 49.7
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 2.8e-129 466.5 410 61.7
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 1.3e-126 457.6 541 51.8
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 1.1e-125 454.5 413 59.3
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 1.1e-125 454.5 559 50.3
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 6.9e-120 435.3 539 49.2
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 2.9e-118 429.9 514 51.0
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 4.3e-114 416.0 491 53.4
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 8.8e-99 365.2 390 53.8
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 3.1e-96 356.7 554 42.2
Os08g0528800 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 4.2e-93 346.3 550 41.6
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 3.4e-74 283.5 305 56.7
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 1.4e-72 278.1 345 47.5
SEGI_00167 Sequoiadendron giganteum HOM05D005604 ORTHO05D006745 5.1e-54 216.5 260 45.0
DCAR_026186 Daucus carota HOM05D005604 ORTHO05D006745 5.4e-48 196.4 465 35.9
ECA247G2712 Erigeron canadensis HOM05D005604 ORTHO05D006745 3.8e-33 147.1 175 53.7
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 6.9e-27 126.3 79 74.7
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.0e-22 112.5 112 59.8
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 1.8e-22 111.7 83 68.7
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 1.4e-19 102.1 84 63.1
SMO117G0236 Selaginella moellendorffii HOM05D005604 ORTHO05D006745 2.4e-19 101.3 227 29.1
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 4.5e-18 97.1 78 66.7
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis HOM05D005604 ORTHO05D006745 7.1e-16 89.7 236 30.1
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis HOM05D005604 ORTHO05D006745 7.1e-16 89.7 225 28.9
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis HOM05D005604 ORTHO05D006745 1.3e-14 85.5 163 35.6
Mapoly0029s0037 Marchantia polymorpha HOM05D005604 ORTHO05D006745 1.9e-13 81.6 219 30.6


User provided reference genes

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