Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.2e-53 211.1 106 100.0
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.6e-47 192.6 106 89.6
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 8.0e-44 180.3 104 82.7
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.0e-43 179.9 103 86.4
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 2.3e-43 178.7 103 87.4
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.2e-43 177.6 104 80.8
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 3.4e-42 174.9 104 78.8
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 9.8e-42 173.3 104 82.7
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 9.8e-42 173.3 104 82.7
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.3e-41 172.9 104 83.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.2e-41 172.2 104 78.8
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 2.8e-41 171.8 104 79.8
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.8e-41 171.8 103 81.6
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 3.7e-41 171.4 104 83.7
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 8.3e-41 170.2 104 77.9
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 8.3e-41 170.2 104 78.8
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 8.3e-41 170.2 104 80.8
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 77.9
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 80.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 1.8e-40 169.1 104 80.8
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 2.4e-40 168.7 104 79.8
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.1e-40 168.3 103 77.7
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.1e-40 167.9 101 81.2
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 7.0e-40 167.2 104 80.8
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.2e-39 166.4 104 79.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.6e-39 166.0 103 80.6
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.6e-39 166.0 98 82.7
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.6e-39 166.0 103 79.6
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.6e-39 166.0 104 76.9
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.0e-39 165.6 101 80.2
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 2.7e-39 165.2 105 73.3
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 3.5e-39 164.9 103 78.6
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 4.5e-39 164.5 105 77.1
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 5.9e-39 164.1 104 80.8
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.0e-38 163.3 99 79.8
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 2.3e-38 162.2 103 77.7
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.3e-38 162.2 101 78.2
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 2.9e-38 161.8 103 78.6
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 2.9e-38 161.8 101 77.2
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 3.8e-38 161.4 89 87.6
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.8e-38 161.4 101 78.2
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 8.6e-38 160.2 104 76.0
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.5e-37 158.7 94 80.9
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.5e-37 158.7 103 77.7
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 2.5e-37 158.7 104 76.0
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 3.3e-37 158.3 96 80.2
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.3e-37 158.3 104 76.9
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 4.3e-37 157.9 104 78.8
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 9.5e-37 156.8 103 76.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 9.5e-37 156.8 103 74.8
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.2e-36 156.4 103 76.7
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.6e-36 156.0 104 74.0
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.6e-36 156.0 104 76.9
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 3.6e-36 154.8 99 76.8
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 4.7e-36 154.5 94 79.8
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 4.7e-36 154.5 103 76.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 8.0e-36 153.7 101 73.3
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.4e-35 152.9 96 79.2
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.8e-35 152.5 103 73.8
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 3.0e-35 151.8 103 73.8
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 5.2e-35 151.0 103 73.8
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 8.9e-35 150.2 104 73.1
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 8.9e-35 150.2 91 80.2
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 3.4e-34 148.3 102 71.6
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 7.5e-34 147.1 91 78.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 9.8e-34 146.7 103 70.9
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.3e-33 146.4 98 70.4
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 2.9e-33 145.2 97 72.2
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.9e-33 145.2 91 76.9
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 4.9e-33 144.4 91 76.9
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 4.9e-33 144.4 91 78.0
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 4.9e-33 144.4 89 79.8
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 6.4e-33 144.1 103 68.9
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.1e-32 143.3 91 75.8
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.1e-32 143.3 103 69.9
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.4e-32 142.9 90 76.7
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 1.8e-32 142.5 82 87.8
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 9.2e-32 140.2 90 74.4
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 9.2e-32 140.2 90 74.4
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.6e-31 139.4 104 65.4
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 2.7e-31 138.7 75 90.7
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 5.9e-31 137.5 96 66.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 5.9e-31 137.5 91 73.6
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 5.9e-31 137.5 91 72.5
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 1.7e-30 136.0 90 72.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.7e-30 136.0 93 68.8
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 2.3e-30 135.6 90 72.2
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 3.0e-30 135.2 91 71.4
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 3.0e-30 135.2 94 73.4
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.5e-29 132.9 91 70.3
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 1.6e-28 129.4 92 66.3
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 5.2e-27 124.4 75 80.0
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 8.9e-27 123.6 75 81.3
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 2.0e-26 122.5 75 78.7
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 3.4e-26 121.7 77 77.9
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.3e-25 119.8 90 71.1
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.7e-25 119.4 75 77.3
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 2.2e-25 119.0 75 77.3
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 4.9e-25 117.9 98 58.2
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.9e-24 115.9 79 69.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 7.8e-23 110.5 74 74.3
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.0e-22 110.2 91 60.4
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 1.3e-22 109.8 74 74.3
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.5e-21 106.3 63 79.4
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 4.7e-20 101.3 77 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 6.2e-20 100.9 102 55.9
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 1.5e-18 96.3 100 51.0
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.5e-18 96.3 73 64.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 6.4e-17 90.9 100 52.0
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 8.3e-17 90.5 63 69.8
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.6e-15 86.3 85 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.1e-15 85.9 80 51.2
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.7e-14 82.8 65 66.2
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 5.1e-14 81.3 90 46.7
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.1e-13 80.1 76 52.6
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 7.3e-13 77.4 52 75.0
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 1.8e-11 72.8 85 50.6
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 9.2e-08 60.5 80 42.5
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 4.6e-07 58.2 39 64.1


User provided reference genes

Program Settings