Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008987g0060 Nicotiana tabacum HOM05D025745 ORTHO05D028490 1.5e-119 433.0 234 100.0
Sopen04g005410 Solanum pennellii HOM05D025745 ORTHO05D028490 1.6e-36 157.1 230 50.0
Nitab4.5_0000426g0190 Nicotiana tabacum HOM05D025745 ORTHO05D028490 3.5e-31 139.4 178 49.4
CAN.G1557.4 Capsicum annuum HOM05D025745 ORTHO05D028490 6.1e-28 128.6 183 53.6
CAN.G1602.6 Capsicum annuum HOM05D002337 ORTHO05D002412 1.3e-22 110.9 280 42.1
Solyc05g054850.1 Solanum lycopersicum HOM05D002337 ORTHO05D002412 5.5e-21 105.5 281 39.1
Sopen05g033320 Solanum pennellii HOM05D002337 ORTHO05D002412 2.1e-20 103.6 281 38.8
PGSC0003DMG400023413 Solanum tuberosum HOM05D002337 ORTHO05D002412 4.0e-19 99.4 279 38.0
Dinv31396 Davidia involucrata HOM05D002337 ORTHO05D002412 3.4e-18 96.3 247 35.6
Nitab4.5_0000914g0140 Nicotiana tabacum HOM05D002337 ORTHO05D002412 6.3e-17 92.0 274 38.7
CSS0036050 Camellia sinensis var. sinensis HOM05D002337 ORTHO05D002412 8.3e-17 91.7 229 40.2
Lj1P930T24 Lonicera japonica HOM05D002337 ORTHO05D002412 2.4e-16 90.1 230 36.5
CSS0031665 Camellia sinensis var. sinensis HOM05D002337 ORTHO05D002412 1.2e-15 87.8 232 39.7
Dinv25946 Davidia involucrata HOM05D002337 ORTHO05D002412 1.2e-15 87.8 252 38.1
HanXRQChr07g0200871 Helianthus annuus HOM05D002337 ORTHO05D002412 1.6e-15 87.4 243 33.3
ECA276G0006 Erigeron canadensis HOM05D002337 ORTHO05D002412 2.0e-15 87.0 200 37.0
Peaxi162Scf00015g00254 Petunia axillaris HOM05D002337 ORTHO05D002412 5.9e-15 85.5 199 40.2
DCAR_015241 Daucus carota HOM05D002337 ORTHO05D002412 7.7e-15 85.1 236 33.1
Oeu058315.1 Olea europaea HOM05D002337 ORTHO05D002412 5.0e-14 82.4 220 38.2
Cc02_g08550 Coffea canephora HOM05D002337 ORTHO05D002412 9.5e-13 78.2 253 37.2
Thecc.10G060300 Theobroma cacao HOM05D002337 ORTHO05D002412 9.5e-13 78.2 234 36.8
Actinidia38218 Actinidia chinensis HOM05D002337 ORTHO05D002412 1.0e-11 74.7 220 34.5
TAR633G1343 Trochodendron aralioides HOM05D002337 ORTHO05D002412 1.4e-11 74.3 229 37.6
TAR369G0281 Trochodendron aralioides HOM05D002337 ORTHO05D002412 3.0e-11 73.2 218 36.2
Rhsim05G0185600 Rhododendron simsii HOM05D002337 ORTHO05D002412 4.0e-11 72.8 225 34.7
Potri.008G048300 Populus trichocarpa HOM05D002337 ORTHO05D002412 5.2e-11 72.4 231 38.1
DCAR_027693 Daucus carota HOM05D002337 ORTHO05D002412 8.8e-11 71.6 231 32.9
Sabra08G0034400 Salix brachista HOM05D002337 ORTHO05D002412 1.5e-10 70.9 233 38.2
Lsat_1_v5_gn_2_116281 Lactuca sativa HOM05D002337 ORTHO05D002412 2.0e-10 70.5 191 38.2
A04p30530 Brassica napus HOM05D002337 ORTHO05D002412 3.4e-10 69.7 194 33.0
BraA04t18454Z Brassica rapa HOM05D002337 ORTHO05D002412 3.4e-10 69.7 194 33.0
BcaC02g07410 Brassica carinata HOM05D002337 ORTHO05D002412 4.4e-10 69.3 195 33.8
C04p67270 Brassica napus HOM05D002337 ORTHO05D002412 4.4e-10 69.3 195 33.8
Oeu050644.1 Olea europaea HOM05D002337 ORTHO05D002412 4.4e-10 69.3 194 38.7
Potri.010G212800 Populus trichocarpa HOM05D002337 ORTHO05D002412 7.5e-10 68.6 265 34.7
Sabra10G0164700 Salix brachista HOM05D002337 ORTHO05D002412 7.5e-10 68.6 267 35.2
BcaB06g29080 Brassica carinata HOM05D002337 ORTHO05D002412 1.7e-09 67.4 193 33.7
Duzib114G0327 Durio zibethinus HOM05D002337 ORTHO05D002412 1.7e-09 67.4 234 35.9
Rhsim03G0125800 Rhododendron simsii HOM05D002337 ORTHO05D002412 1.7e-09 67.4 259 34.4
Duzib093G0383 Durio zibethinus HOM05D002337 ORTHO05D002412 2.2e-09 67.0 284 33.8
COL.COLO4_10886 Corchorus olitorius HOM05D002337 ORTHO05D002412 2.8e-09 66.6 278 36.3
Gohir.D10G218300 Gossypium hirsutum HOM05D002337 ORTHO05D002412 2.8e-09 66.6 241 32.8
BolC4t28222H Brassica oleracea HOM05D002337 ORTHO05D002412 3.7e-09 66.2 195 33.3
Gohir.A10G210000 Gossypium hirsutum HOM05D002337 ORTHO05D002412 3.7e-09 66.2 246 33.3
BraA05t19669Z Brassica rapa HOM05D002337 ORTHO05D002412 4.9e-09 65.9 228 30.3
RhsimUnG0167900 Rhododendron simsii HOM05D002337 ORTHO05D002412 4.9e-09 65.9 260 33.5
TWI63G1591 Tripterygium wilfordii HOM05D002337 ORTHO05D002412 4.9e-09 65.9 232 37.1
A05p07030 Brassica napus HOM05D002337 ORTHO05D002412 6.3e-09 65.5 228 30.7
GSVIVG01032616001 Vitis vinifera HOM05D002337 ORTHO05D002412 8.3e-09 65.1 253 37.9
BolC4t22441H Brassica oleracea HOM05D002337 ORTHO05D002412 1.4e-08 64.3 228 28.9
Thhalv10016955m.g Eutrema salsugineum HOM05D002337 ORTHO05D002412 1.4e-08 64.3 222 29.7
BcaC02g12053 Brassica carinata HOM05D002337 ORTHO05D002412 3.1e-08 63.2 229 30.6
C04p08430 Brassica napus HOM05D002337 ORTHO05D002412 3.1e-08 63.2 229 30.6
Haze_20705 Corylus avellana HOM05D002337 ORTHO05D002412 3.1e-08 63.2 266 32.0
Ciclev10031892m.g Citrus clementina HOM05D002337 ORTHO05D002412 4.1e-08 62.8 291 32.6
Nitab4.5_0011080g0010 Nicotiana tabacum HOM05D002337 ORTHO05D002412 4.1e-08 62.8 130 52.3
Sp4g21680 Schrenkiella parvula HOM05D002337 ORTHO05D002412 4.1e-08 62.8 204 32.4
Atru.chr12.580 Acer truncatum HOM05D002337 ORTHO05D002412 5.4e-08 62.4 277 32.5
Manes.07G107400 Manihot esculenta HOM05D002337 ORTHO05D002412 7.0e-08 62.0 237 33.8
Duzib128G1181 Durio zibethinus HOM05D002337 ORTHO05D002412 9.2e-08 61.6 237 35.9
Ciclev10011960m.g Citrus clementina HOM05D002337 ORTHO05D002412 1.2e-07 61.2 235 34.5
Duzib106G0681 Durio zibethinus HOM05D002337 ORTHO05D002412 1.2e-07 61.2 236 33.5
Peaxi162Scf00039g00045 Petunia axillaris HOM05D002337 ORTHO05D002412 1.2e-07 61.2 270 32.6
Thecc.05G047800 Theobroma cacao HOM05D002337 ORTHO05D002412 1.2e-07 61.2 234 35.5
Aqoxy2G01952 Aquilegia oxysepala HOM05D002337 ORTHO05D002412 1.6e-07 60.8 296 33.4
BcaB02g09129 Brassica carinata HOM05D002337 ORTHO05D002412 1.6e-07 60.8 229 30.1
TAR623G1231 Trochodendron aralioides HOM05D002337 ORTHO05D002412 1.6e-07 60.8 228 36.0
Nn2g10536 Nelumbo nucifera HOM05D002337 ORTHO05D002412 2.0e-07 60.5 239 35.1
TWI38G1175 Tripterygium wilfordii HOM05D002337 ORTHO05D002412 2.0e-07 60.5 232 34.1
Actinidia19740 Actinidia chinensis HOM05D002337 ORTHO05D002412 2.7e-07 60.1 194 37.6
ClCG02G013620 Citrullus lanatus HOM05D002337 ORTHO05D002412 2.7e-07 60.1 224 33.5
Hma1.2p1_0207F.1_g087900 Hydrangea macrophylla HOM05D002337 ORTHO05D002412 2.7e-07 60.1 232 35.3
CARHR134220 Cardamine hirsuta HOM05D002337 ORTHO05D002412 5.9e-07 58.9 214 29.0
Lj5g0026996 Lotus japonicus HOM05D002337 ORTHO05D002412 7.8e-07 58.5 226 28.8
Cpa.g.sc1.312 Carica papaya HOM05D002337 ORTHO05D002412 1.0e-06 58.2 223 37.7
Cc06_g03190 Coffea canephora HOM05D002337 ORTHO05D002412 1.0e-06 58.2 234 33.8
AL4G36720 Arabidopsis lyrata HOM05D002337 ORTHO05D002412 1.3e-06 57.8 211 30.8
TAR636G1284 Trochodendron aralioides HOM05D002337 ORTHO05D002412 1.3e-06 57.8 282 32.6
Aa31LG5G20330 Aethionema arabicum HOM05D002337 ORTHO05D002412 2.3e-06 57.0 235 30.2
Manes.10G038400 Manihot esculenta HOM05D002337 ORTHO05D002412 2.3e-06 57.0 193 35.2
Nitab4.5_0000643g0110 Nicotiana tabacum HOM05D002337 ORTHO05D002412 2.3e-06 57.0 231 35.1
AT2G39370 Arabidopsis thaliana HOM05D002337 ORTHO05D002412 3.8e-06 56.2 212 30.7
Solyc09g005880.1 Solanum lycopersicum HOM05D002337 ORTHO05D002412 5.0e-06 55.8 242 33.5
C09p51700 Brassica napus HOM05D002337 ORTHO05D002412 6.6e-06 55.5 110 36.4
Prupe.2G225400 Prunus persica HOM05D002337 ORTHO05D002412 6.6e-06 55.5 268 32.1
QL08p057719 Quercus lobata HOM05D002337 ORTHO05D002412 6.6e-06 55.5 268 32.1
PGR044G1716 Punica granatum HOM05D002337 ORTHO05D002412 8.6e-06 55.1 233 32.2


User provided reference genes

Program Settings