Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008978g0030 Nicotiana tabacum HOM05D004824 ORTHO05D003903 6.4e-217 758.1 734 100.0
Nitab4.5_0000391g0190 Nicotiana tabacum HOM05D004824 ORTHO05D003903 3.1e-86 323.9 654 76.1
Solyc05g012920.3 Solanum lycopersicum HOM05D004824 ORTHO05D003903 4.2e-83 313.5 662 71.6
Peaxi162Scf00222g00211 Petunia axillaris HOM05D004824 ORTHO05D003903 1.4e-78 298.5 652 60.6
CAN.G964.21 Capsicum annuum HOM05D004824 ORTHO05D003903 5.5e-75 286.6 653 74.6
Sopen05g007720 Solanum pennellii HOM05D004824 ORTHO05D003903 1.1e-67 262.3 654 72.9
PGSC0003DMG400028391 Solanum tuberosum HOM05D004824 ORTHO05D003903 2.4e-62 244.6 654 72.0
CAN.G1642.5 Capsicum annuum HOM05D004824 ORTHO05D003903 2.0e-56 224.9 626 42.0
Actinidia04364 Actinidia chinensis HOM05D004824 ORTHO05D003903 2.5e-51 208.0 479 78.9
SHI24599 Sapria himalayana HOM05D008459 ORTHO05D003903 1.5e-32 145.6 238 41.2
ECA233G4957 Erigeron canadensis HOM05D004824 ORTHO05D003903 5.7e-32 143.7 235 46.4
Hma1.2p1_0098F.1_g048160 Hydrangea macrophylla HOM05D004824 ORTHO05D003903 1.8e-30 138.7 98 67.3
Cc02_g09320 Coffea canephora HOM05D004824 ORTHO05D003903 2.4e-30 138.3 94 69.1
Dinv16084 Davidia involucrata HOM05D004824 ORTHO05D003903 3.5e-29 134.4 96 66.7
SalBow7G1004 Salvia bowleyana HOM05D004824 ORTHO05D003903 1.0e-28 132.9 108 62.0
Thecc.01G121800 Theobroma cacao HOM05D004824 ORTHO05D003903 1.3e-28 132.5 107 59.8
Rhsim04G0218400 Rhododendron simsii HOM05D004020 ORTHO05D004735 1.5e-27 129.0 100 61.0
Sed0004559 Sechium edule HOM05D004824 ORTHO05D003903 2.5e-27 128.3 124 48.4
Duzib147G0012 Durio zibethinus HOM05D004824 ORTHO05D003903 3.3e-27 127.9 106 60.4
HanXRQChr12g0366191 Helianthus annuus HOM05D004824 ORTHO05D003903 4.3e-27 127.5 236 46.2
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 9.5e-27 126.3 98 61.2
HanXRQChr17g0540701 Helianthus annuus HOM05D004824 ORTHO05D003903 2.8e-26 124.8 238 49.2
Sc12g0010940 Simmondsia chinensis HOM05D004824 ORTHO05D003903 3.6e-26 124.4 105 56.2
Cpa.g.sc743.5 Carica papaya HOM05D004824 ORTHO05D003903 6.2e-26 123.6 107 57.0
CSS0029730 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 2.3e-25 121.7 95 62.1
Gohir.A05G388900 Gossypium hirsutum HOM05D004824 ORTHO05D003903 2.3e-25 121.7 107 59.8
vmacro09539 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 2.3e-25 121.7 106 56.6
ECA246G3641 Erigeron canadensis HOM05D005906 ORTHO05D007359 4.0e-25 120.9 222 43.2
Lj1g0019375 Lotus japonicus HOM05D004824 ORTHO05D003903 6.8e-25 120.2 111 55.9
CSS0000296 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 1.2e-24 119.4 88 64.8
Lsat_1_v5_gn_8_33440 Lactuca sativa HOM05D004824 ORTHO05D003903 1.2e-24 119.4 236 44.1
DCAR_030408 Daucus carota HOM05D004824 ORTHO05D003903 2.6e-24 118.2 107 55.1
arahy.Tifrunner.gnm1.ann1.XC7PBP Arachis hypogaea HOM05D004824 ORTHO05D003903 7.5e-24 116.7 110 50.0
MD10G1219600 Malus domestica HOM05D004824 ORTHO05D003903 7.5e-24 116.7 99 62.6
EL10Ac8g19216 Beta vulgaris HOM05D004824 ORTHO05D003903 9.8e-24 116.3 107 53.3
ClCG06G012000 Citrullus lanatus HOM05D004824 ORTHO05D003903 9.8e-24 116.3 120 47.5
Migut.D01549 Erythranthe guttata HOM05D004824 ORTHO05D003903 9.8e-24 116.3 108 57.4
Lj1g0000290 Lotus japonicus HOM05D004824 ORTHO05D003903 9.8e-24 116.3 107 52.3
MSTRG.2666 Avicennia marina HOM05D004824 ORTHO05D003903 1.3e-23 115.9 91 60.4
Gohir.D04G027600 Gossypium hirsutum HOM05D004824 ORTHO05D003903 3.7e-23 114.4 102 59.8
Gorai.012G030300 Gossypium raimondii HOM05D004824 ORTHO05D003903 3.7e-23 114.4 102 59.8
MD05G1241200 Malus domestica HOM05D004824 ORTHO05D003903 3.7e-23 114.4 302 38.7
Aa31LG5G8990 Aethionema arabicum HOM05D004824 ORTHO05D003903 4.9e-23 114.0 107 50.5
Gorai.N017300 Gossypium raimondii HOM05D004824 ORTHO05D003903 4.9e-23 114.0 102 59.8
FAN25G3679 Fragaria x ananassa HOM05D004824 ORTHO05D003903 6.4e-23 113.6 107 53.3
arahy.Tifrunner.gnm1.ann1.SR7DDI Arachis hypogaea HOM05D004824 ORTHO05D003903 8.3e-23 113.2 110 49.1
CsaV3_1G028470 Cucumis sativus L. HOM05D004824 ORTHO05D003903 1.1e-22 112.8 120 45.8
Gohir.D04G027800 Gossypium hirsutum HOM05D004824 ORTHO05D003903 1.1e-22 112.8 102 58.8
FvH4_3g13690 Fragaria vesca HOM05D004824 ORTHO05D003903 1.9e-22 112.1 107 53.3
FAN11G3130 Fragaria x ananassa HOM05D004824 ORTHO05D003903 1.9e-22 112.1 107 53.3
TWI79G0695 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 1.9e-22 112.1 101 55.4
Lsat_1_v5_gn_0_9380 Lactuca sativa HOM05D004824 ORTHO05D003903 2.4e-22 111.7 108 54.6
RcHm_v2.0_Chr5g0022931 Rosa chinensis HOM05D004824 ORTHO05D003903 2.4e-22 111.7 237 45.1
Potri.004G066600 Populus trichocarpa HOM05D004824 ORTHO05D003903 9.2e-22 109.8 119 47.9
HanXRQChr13g0425261 Helianthus annuus HOM05D004824 ORTHO05D003903 1.2e-21 109.4 239 47.3
Hund12341 Selenicereus undatus HOM05D004824 ORTHO05D003903 1.2e-21 109.4 107 52.3
QL05p080937 Quercus lobata HOM05D004824 ORTHO05D003903 1.6e-21 109.0 100 59.0
arahy.Tifrunner.gnm1.ann1.X6IIW5 Arachis hypogaea HOM05D004824 ORTHO05D003903 3.5e-21 107.8 109 49.5
Lj1g0015996 Lotus japonicus HOM05D000005 ORTHO05D000012 3.5e-21 107.8 108 50.0
Rhsim04G0218500 Rhododendron simsii HOM05D004824 ORTHO05D003903 3.5e-21 107.8 76 67.1
Ciclev10011094m.g Citrus clementina HOM05D004824 ORTHO05D003903 4.6e-21 107.5 107 52.3
Prupe.4G124300 Prunus persica HOM05D004824 ORTHO05D003903 6.0e-21 107.1 99 57.6
FAN16G0917 Fragaria x ananassa HOM05D001160 ORTHO05D001092 1.7e-20 105.5 107 51.4
Manes.10G060400 Manihot esculenta HOM05D004824 ORTHO05D003903 3.0e-20 104.8 95 56.8
Sabra04G0044400 Salix brachista HOM05D004824 ORTHO05D003903 3.0e-20 104.8 123 45.5
SHI51070 Sapria himalayana HOM05D008459 ORTHO05D003903 8.6e-20 103.2 228 31.6
SHI33202 Sapria himalayana HOM05D008459 ORTHO05D003903 1.1e-19 102.8 219 31.1
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 2.5e-19 101.7 111 48.6
Ciclev10014253m.g Citrus clementina HOM05D004824 ORTHO05D003903 2.5e-19 101.7 107 49.5
CANSAT11G2445 Cannabis sativa HOM05D004824 ORTHO05D003903 4.3e-19 100.9 107 47.7
THA.LOC104816942 Tarenaya hassleriana HOM05D004824 ORTHO05D003903 7.3e-19 100.1 109 47.7
TWI63G0852 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 9.5e-19 99.8 101 49.5
MELO3C010266.2 Cucumis melo HOM05D004824 ORTHO05D003903 1.2e-18 99.4 107 46.7
Carub.0004s0722 Capsella rubella HOM05D004824 ORTHO05D003903 2.8e-18 98.2 105 52.4
Ca_06791_v3 Cicer arietinum L. HOM05D004824 ORTHO05D003903 4.7e-18 97.4 107 47.7
AL4G19980 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 6.2e-18 97.1 107 50.5
Oeu060442.1 Olea europaea HOM05D004824 ORTHO05D003903 6.2e-18 97.1 85 58.8
Ah.10g031450 Amaranthus hybridus HOM05D004824 ORTHO05D003903 8.1e-18 96.7 94 47.9
SHI28137 Sapria himalayana HOM05D008459 ORTHO05D003903 8.1e-18 96.7 120 40.8
TPR.G25583 Trifolium pratense HOM05D004824 ORTHO05D003903 8.1e-18 96.7 110 43.6
SHI35543 Sapria himalayana HOM05D008459 ORTHO05D003903 1.1e-17 96.3 232 29.7
HanXRQChr13g0425241 Helianthus annuus HOM05D004824 ORTHO05D003903 1.4e-17 95.9 106 49.1
BcaC02g10842 Brassica carinata HOM05D004824 ORTHO05D003903 1.8e-17 95.5 106 49.1
C04p24590 Brassica napus HOM05D004824 ORTHO05D003903 1.8e-17 95.5 106 49.1
BolC4t23963H Brassica oleracea HOM05D004824 ORTHO05D003903 1.8e-17 95.5 106 49.1
CANSAT21G1575 Cannabis sativa HOM05D004824 ORTHO05D003903 1.8e-17 95.5 105 50.5
Lalb_Chr10g0093361 Lupinus albus HOM05D004824 ORTHO05D003903 3.1e-17 94.7 104 49.0
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 4.0e-17 94.4 106 45.3
CARHR118970 Cardamine hirsuta HOM05D004824 ORTHO05D003903 5.2e-17 94.0 240 37.5
Thhalv10001906m.g Eutrema salsugineum HOM05D004824 ORTHO05D003903 5.2e-17 94.0 107 51.4
Medtr3g091500 Medicago truncatula HOM05D004824 ORTHO05D003903 6.8e-17 93.6 110 43.6
TAR623G1477 Trochodendron aralioides HOM05D004824 ORTHO05D003903 6.8e-17 93.6 97 51.5
GSVIVG01015849001 Vitis vinifera HOM05D004824 ORTHO05D003903 8.9e-17 93.2 98 48.0
Sp4g08720 Schrenkiella parvula HOM05D004824 ORTHO05D003903 1.2e-16 92.8 106 50.0
A07p17870 Brassica napus HOM05D004824 ORTHO05D003903 1.5e-16 92.4 106 49.1
BraA07t29506Z Brassica rapa HOM05D004824 ORTHO05D003903 2.6e-16 91.7 106 49.1
AT2G26790 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 3.4e-16 91.3 126 41.3
CiPaw.15G110500 Carya illinoinensis HOM05D004824 ORTHO05D003903 3.4e-16 91.3 82 53.7
Manes.02G087700 Manihot esculenta HOM05D004824 ORTHO05D003903 3.4e-16 91.3 92 43.5
Haze_18457 Corylus avellana HOM05D004824 ORTHO05D003903 4.4e-16 90.9 80 53.8
AUR62027511 Chenopodium quinoa HOM05D004824 ORTHO05D003903 2.9e-15 88.2 236 41.9
VMungo1383G0602 Vigna mungo HOM05D004824 ORTHO05D003903 8.3e-15 86.7 102 48.0
CARHR014190 Cardamine hirsuta HOM05D004824 ORTHO05D003903 1.1e-14 86.3 109 42.2
Glyma.05G060900 Glycine max HOM05D004824 ORTHO05D003903 1.4e-14 85.9 100 46.0
AUR62033969 Chenopodium quinoa HOM05D004824 ORTHO05D003903 3.2e-14 84.7 100 48.0
Medtr7g011500 Medicago truncatula HOM05D004824 ORTHO05D003903 3.2e-14 84.7 108 44.4
Phvul.008G038900 Phaseolus vulgaris HOM05D004824 ORTHO05D003903 4.1e-14 84.3 104 47.1
arahy.Tifrunner.gnm1.ann1.F7MB9I Arachis hypogaea HOM05D004824 ORTHO05D003903 5.4e-14 84.0 104 41.3
SHI48935 Sapria himalayana HOM05D008459 ORTHO05D003903 7.1e-14 83.6 226 25.7
PGR142G1633 Punica granatum HOM05D004824 ORTHO05D003903 9.2e-14 83.2 107 44.9
TPR.G25560 Trifolium pratense HOM05D004824 ORTHO05D003903 1.2e-13 82.8 103 43.7
VMungo0251G2839 Vigna mungo HOM05D004824 ORTHO05D003903 2.1e-13 82.0 101 46.5
SHI49399 Sapria himalayana HOM05D008459 ORTHO05D003903 2.7e-13 81.6 239 27.6
AL1G25600 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 3.5e-13 81.3 107 39.3
Eucgr.F01187 Eucalyptus grandis HOM05D004824 ORTHO05D003903 4.6e-13 80.9 235 42.6
TPR.G33705 Trifolium pratense HOM05D002450 ORTHO05D002953 4.6e-13 80.9 102 43.1
ECA246G0928 Erigeron canadensis HOM05D004824 ORTHO05D003903 6.0e-13 80.5 93 43.0
TPR.G33412 Trifolium pratense HOM05D004824 ORTHO05D003903 1.0e-12 79.7 126 37.3
Psat3g199520 Pisum sativum HOM05D004824 ORTHO05D003903 1.3e-12 79.3 96 44.8
SGA_v2.0_scaffold17G08192 Striga asiatica HOM05D004824 ORTHO05D003903 2.3e-12 78.6 136 36.8
TPR.G4149 Trifolium pratense HOM05D004824 ORTHO05D003903 2.3e-12 78.6 107 42.1
AUR62033164 Chenopodium quinoa HOM05D004824 ORTHO05D003903 3.0e-12 78.2 96 45.8
MBI06_g07794_MAGBIO Magnolia biondii HOM05D004824 ORTHO05D003903 3.0e-12 78.2 106 42.5
Psat3g199560 Pisum sativum HOM05D004824 ORTHO05D003903 3.0e-12 78.2 124 37.1
TPR.G27632 Trifolium pratense HOM05D004824 ORTHO05D003903 3.0e-12 78.2 148 33.1
SHI40908 Sapria himalayana HOM05D008459 ORTHO05D003903 8.6e-12 76.6 122 35.2
AT1G13800 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 1.1e-11 76.3 107 38.3
AUR62008612 Chenopodium quinoa HOM05D004824 ORTHO05D003903 1.1e-11 76.3 90 46.7
SHI41352 Sapria himalayana HOM05D008459 ORTHO05D003903 1.1e-11 76.3 239 26.8
Carub.0001s1351 Capsella rubella HOM05D004824 ORTHO05D003903 3.3e-11 74.7 120 38.3
CDE04G1389 Ceratophyllum demersum HOM05D004824 ORTHO05D003903 4.3e-11 74.3 103 37.9
SHI50303 Sapria himalayana HOM05D008459 ORTHO05D003903 5.6e-11 73.9 123 34.1
SHI50547 Sapria himalayana HOM05D008459 ORTHO05D003903 1.2e-10 72.8 114 34.2
COL.COLO4_22429 Corchorus olitorius HOM05D000173 ORTHO05D003903 1.6e-10 72.4 228 29.4
Lsat_1_v5_gn_1_54320 Lactuca sativa HOM05D004824 ORTHO05D003903 1.6e-10 72.4 110 37.3
MELO3C010547.2 Cucumis melo HOM05D004824 ORTHO05D003903 6.2e-10 70.5 66 50.0
Medtr7g011520 Medicago truncatula HOM05D004824 ORTHO05D003903 6.2e-10 70.5 93 41.9
SHI35413 Sapria himalayana HOM05D008459 ORTHO05D003903 1.4e-09 69.3 114 35.1
SHI39683 Sapria himalayana HOM05D008459 ORTHO05D003903 3.1e-09 68.2 212 24.5
Nn2g15691 Nelumbo nucifera HOM05D004824 ORTHO05D003903 4.0e-09 67.8 92 44.6
SHI36947 Sapria himalayana HOM05D008459 ORTHO05D003903 5.2e-09 67.4 114 35.1
SHI35270 Sapria himalayana HOM05D008459 ORTHO05D000778 7.6e-08 63.5 117 31.6
SHI47034 Sapria himalayana HOM05D008459 ORTHO05D003903 7.6e-08 63.5 115 33.9
Glyma.07G217800 Glycine max HOM05D004824 ORTHO05D003903 1.3e-07 62.8 59 50.8
Sp1g12140 Schrenkiella parvula HOM05D004824 ORTHO05D017526 1.7e-07 62.4 106 37.7
SHI50109 Sapria himalayana HOM05D008459 ORTHO05D003903 2.2e-07 62.0 163 28.2
BcaB08g37396 Brassica carinata HOM05D004824 ORTHO05D017526 2.9e-07 61.6 107 34.6
SHI51640 Sapria himalayana HOM05D008459 ORTHO05D003903 2.9e-07 61.6 112 33.0
AagrBONN_evm.TU.Sc2ySwM_368.531 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.8e-07 61.2 131 26.0
AagrBONN_evm.TU.Sc2ySwM_228.1649 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.9e-07 60.8 201 21.4
AagrBONN_evm.TU.Sc2ySwM_344.3513 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.4e-07 60.5 200 21.0
SHI49965 Sapria himalayana HOM05D008459 ORTHO05D003903 6.4e-07 60.5 117 31.6
HPP92_026390 Vanilla planifolia HOM05D004824 ORTHO05D003903 6.4e-07 60.5 106 34.0
SHI32541 Sapria himalayana HOM05D008459 ORTHO05D003903 1.1e-06 59.7 178 24.2
AUR62024377 Chenopodium quinoa HOM05D000001 ORTHO05D000003 1.9e-06 58.9 131 30.5
Glyma.07G217750 Glycine max HOM05D004824 ORTHO05D003903 1.9e-06 58.9 76 40.8
MBI06_g08450_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 1.9e-06 58.9 205 22.9
SHI49850 Sapria himalayana HOM05D008459 ORTHO05D003903 1.9e-06 58.9 117 30.8
AagrBONN_evm.TU.Sc2ySwM_369.245 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.4e-06 58.5 130 30.0
Ciclev10006760m.g Citrus clementina HOM05D000001 ORTHO05D000003 3.2e-06 58.2 131 29.8
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.2e-06 58.2 127 27.6
Lsat_1_v5_gn_7_55601 Lactuca sativa HOM05D006842 ORTHO05D008908 4.1e-06 57.8 126 25.4
AagrBONN_evm.TU.Sc2ySwM_369.195 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.4e-06 57.4 132 29.5
arahy.Tifrunner.gnm1.ann1.7L3346 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.4e-06 57.4 206 22.3
arahy.Tifrunner.gnm1.ann1.K52VCA Arachis hypogaea HOM05D000001 ORTHO05D000003 5.4e-06 57.4 206 22.3
CSS0047655 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 5.4e-06 57.4 131 29.0
Cpa.g.sc159.24 Carica papaya HOM05D007893 ORTHO05D010042 5.4e-06 57.4 108 29.6
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 5.4e-06 57.4 117 28.2
Manes.09G030400 Manihot esculenta HOM05D000001 ORTHO05D000003 5.4e-06 57.4 131 31.3
VMungo0647G1609 Vigna mungo HOM05D002453 ORTHO05D002107 5.4e-06 57.4 119 30.3
AagrBONN_evm.TU.Sc2ySwM_344.5045 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.1e-06 57.0 139 28.8
ECA236G4855 Erigeron canadensis HOM05D000001 ORTHO05D000003 7.1e-06 57.0 131 29.8
Lsat_1_v5_gn_1_52160 Lactuca sativa HOM05D004824 ORTHO05D003903 7.1e-06 57.0 108 33.3
PSO478G4544 Papaver somniferum HOM05D000001 ORTHO05D000003 7.1e-06 57.0 182 24.7
GSVIVG01037258001 Vitis vinifera HOM05D000001 ORTHO05D000003 7.1e-06 57.0 207 41.1
Actinidia09797 Actinidia chinensis HOM05D005764 ORTHO05D006600 9.2e-06 56.6 206 26.2
AagrBONN_evm.TU.Sc2ySwM_228.4674__4675 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.2e-06 56.6 129 27.9
AagrBONN_evm.TU.Sc2ySwM_228.5321 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.2e-06 56.6 202 19.8
AagrBONN_evm.TU.Sc2ySwM_340.512 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.2e-06 56.6 132 28.0
BraA06t24177Z Brassica rapa HOM05D004824 ORTHO05D003903 9.2e-06 56.6 74 43.2
CSS0048420 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 9.2e-06 56.6 131 29.0
CiPaw.12G066600 Carya illinoinensis HOM05D007893 ORTHO05D010042 9.2e-06 56.6 108 30.6
Glyma.18G262450 Glycine max HOM05D004824 ORTHO05D003903 9.2e-06 56.6 45 62.2
SHI45704 Sapria himalayana HOM05D008459 ORTHO05D003903 9.2e-06 56.6 94 33.0


User provided reference genes

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