Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008965g0010 Nicotiana tabacum HOM05D003807 ORTHO05D002847 5.5e-116 421.0 216 100.0
Nitab4.5_0000443g0160 Nicotiana tabacum HOM05D003807 ORTHO05D002847 5.6e-76 288.1 220 75.9
Peaxi162Scf00199g00093 Petunia axillaris HOM05D003807 ORTHO05D002847 6.8e-58 228.0 218 66.1
Nitab4.5_0002305g0070 Nicotiana tabacum HOM05D003807 ORTHO05D002847 1.1e-47 194.1 215 63.7
Peaxi162Scf00198g00104 Petunia axillaris HOM05D003807 ORTHO05D002847 1.2e-46 190.7 218 59.2
Peaxi162Scf00556g00041 Petunia axillaris HOM05D003807 ORTHO05D002847 6.2e-43 178.3 218 58.3
Nitab4.5_0000138g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 7.6e-41 171.4 207 61.8
PGSC0003DMG400009434 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.9e-40 169.5 216 54.6
Peaxi162Scf00876g00004 Petunia axillaris HOM05D003807 ORTHO05D002847 2.8e-35 152.9 141 66.0
Peaxi162Scf01809g00001 Petunia axillaris HOM05D003807 ORTHO05D002847 2.8e-35 152.9 141 66.0
Solyc02g031990.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 1.8e-34 150.2 215 49.3
PGSC0003DMG400014938 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.4e-34 149.8 219 52.1
Sopen02g017610 Solanum pennellii HOM05D003807 ORTHO05D002847 1.5e-33 147.1 146 61.6
Sopen02g010250 Solanum pennellii HOM05D003807 ORTHO05D002847 1.7e-24 117.1 168 46.4
Duzib248G0332 Durio zibethinus HOM05D003807 ORTHO05D002847 1.3e-19 100.9 176 39.2
DCAR_001286 Daucus carota HOM05D003807 ORTHO05D002847 2.2e-16 90.1 157 41.4
Duzib132G0260 Durio zibethinus HOM05D003807 ORTHO05D002847 4.9e-16 89.0 139 41.0
Solyc02g068460.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 8.4e-16 88.2 146 44.5
Thecc.02G005500 Theobroma cacao HOM05D003807 ORTHO05D002847 1.9e-15 87.0 174 37.4
CiPaw.09G073700 Carya illinoinensis HOM05D003807 ORTHO05D002847 1.2e-14 84.3 186 34.9
Sopen02g017600 Solanum pennellii HOM05D003807 ORTHO05D002847 1.2e-14 84.3 154 42.9
PGSC0003DMG400009442 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.1e-14 83.6 124 49.2
Prupe.4G116000 Prunus persica HOM05D003807 ORTHO05D002847 2.7e-14 83.2 177 40.7
TWI63G0470 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 2.7e-14 83.2 182 38.5
Manes.03G074500 Manihot esculenta HOM05D003807 ORTHO05D002847 2.3e-13 80.1 137 43.1
Nitab4.5_0000443g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.0e-13 79.7 141 41.1
Nitab4.5_0008708g0020 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.0e-13 79.7 187 38.0
CAN.G1299.6 Capsicum annuum HOM05D003807 ORTHO05D002847 5.1e-13 79.0 146 40.4
Psat1g149760 Pisum sativum HOM05D003807 ORTHO05D002847 1.1e-12 77.8 151 39.7
CANSAT35G1226 Cannabis sativa HOM05D003807 ORTHO05D002847 1.5e-12 77.4 127 42.5
Oeu046931.1 Olea europaea HOM05D003807 ORTHO05D002847 1.5e-12 77.4 131 42.7
QL11p012767 Quercus lobata HOM05D003807 ORTHO05D002847 1.5e-12 77.4 142 40.1
Sabra01G0133000 Salix brachista HOM05D003807 ORTHO05D002847 1.5e-12 77.4 146 43.8
Actinidia22425 Actinidia chinensis HOM05D003807 ORTHO05D002847 1.9e-12 77.0 160 38.1
TWI38G0220 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 1.9e-12 77.0 138 40.6
Medtr2g035850 Medicago truncatula HOM05D003807 ORTHO05D002847 3.3e-12 76.3 152 41.4
Haze_06156 Corylus avellana HOM05D003807 ORTHO05D002847 4.3e-12 75.9 79 55.7
Haze_06157 Corylus avellana HOM05D003807 ORTHO05D002847 4.3e-12 75.9 148 38.5
RcHm_v2.0_Chr5g0020711 Rosa chinensis HOM05D003807 ORTHO05D002847 4.3e-12 75.9 124 41.9
TPR.G31858 Trifolium pratense HOM05D003807 ORTHO05D002847 5.7e-12 75.5 152 41.4
Ca_01992_v3 Cicer arietinum L. HOM05D003807 ORTHO05D002847 7.4e-12 75.1 182 34.1
Potri.001G158800 Populus trichocarpa HOM05D003807 ORTHO05D002847 9.6e-12 74.7 139 38.1
Sabra03G0046300 Salix brachista HOM05D003807 ORTHO05D002847 9.6e-12 74.7 193 33.2
Glyma.15G158200 Glycine max HOM05D003807 ORTHO05D002847 1.3e-11 74.3 111 45.9
Atru.chr10.409 Acer truncatum HOM05D003807 ORTHO05D002847 2.1e-11 73.6 82 56.1
Peaxi162Scf00199g00915 Petunia axillaris HOM05D003807 ORTHO05D002847 2.1e-11 73.6 149 38.9
DCAR_004339 Daucus carota HOM05D003807 ORTHO05D002847 2.8e-11 73.2 221 33.9
DCAR_024218 Daucus carota HOM05D003807 ORTHO05D002847 4.8e-11 72.4 221 34.8
FvH4_3g12720 Fragaria vesca HOM05D003807 ORTHO05D002847 6.3e-11 72.0 148 39.2
FAN11G1675 Fragaria x ananassa HOM05D003807 ORTHO05D002847 6.3e-11 72.0 148 39.2
FAN25G3700 Fragaria x ananassa HOM05D003807 ORTHO05D002847 1.1e-10 71.2 150 38.0
Potri.003G075800 Populus trichocarpa HOM05D003807 ORTHO05D002847 1.1e-10 71.2 147 41.5
Dinv31174 Davidia involucrata HOM05D003807 ORTHO05D002847 1.4e-10 70.9 84 47.6
Cfa000664 Carpinus fangiana HOM05D003807 ORTHO05D002847 1.8e-10 70.5 146 36.3
SalBow8G4256 Salvia bowleyana HOM05D003807 ORTHO05D002847 1.8e-10 70.5 68 55.9
Gohir.A12G048200 Gossypium hirsutum HOM05D003807 ORTHO05D002847 3.1e-10 69.7 145 37.2
Gohir.D12G047000 Gossypium hirsutum HOM05D003807 ORTHO05D002847 3.1e-10 69.7 145 37.2
Gorai.008G049600 Gossypium raimondii HOM05D003807 ORTHO05D002847 3.1e-10 69.7 145 37.2
FAN16G0324 Fragaria x ananassa HOM05D003807 ORTHO05D002847 5.3e-10 68.9 148 37.8
VMungo1309G0233 Vigna mungo HOM05D003807 ORTHO05D002847 5.3e-10 68.9 155 35.5
Oeu052639.1 Olea europaea HOM05D003807 ORTHO05D002847 6.9e-10 68.6 118 44.1
Phvul.002G189900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 6.9e-10 68.6 84 51.2
Duzib132G1175 Durio zibethinus HOM05D003807 ORTHO05D002847 9.0e-10 68.2 147 38.1
FAN21G0474 Fragaria x ananassa HOM05D003807 ORTHO05D002847 1.2e-09 67.8 150 37.3
Migut.M02002 Erythranthe guttata HOM05D003807 ORTHO05D002847 2.0e-09 67.0 91 45.1
Hma1.2p1_0088F.1_g045023 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.0e-09 67.0 144 37.5
Hma1.2p1_0088F.1_g045030 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.0e-09 67.0 144 37.5
Lj1P1147T18 Lonicera japonica HOM05D003807 ORTHO05D002847 4.5e-09 65.9 95 44.2
CiPaw.10G062300 Carya illinoinensis HOM05D003807 ORTHO05D002847 5.9e-09 65.5 139 36.7
Glyma.09G051900 Glycine max HOM05D003807 ORTHO05D002847 5.9e-09 65.5 81 50.6
TAR626G1107 Trochodendron aralioides HOM05D001711 ORTHO05D002847 5.9e-09 65.5 140 38.6
TAR627G0259 Trochodendron aralioides HOM05D003807 ORTHO05D002847 5.9e-09 65.5 187 33.2
Ciclev10016595m.g Citrus clementina HOM05D003807 ORTHO05D002847 1.0e-08 64.7 181 31.5
Phvul.009G241900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 1.0e-08 64.7 84 48.8
Sopen07g022830 Solanum pennellii HOM05D003807 ORTHO05D002847 1.3e-08 64.3 151 36.4
Lalb_Chr15g0083801 Lupinus albus HOM05D003807 ORTHO05D002847 1.7e-08 63.9 69 56.5
Oeu008729.1 Olea europaea HOM05D003807 ORTHO05D002847 2.2e-08 63.5 61 59.0
Oeu041444.1 Olea europaea HOM05D003807 ORTHO05D002847 2.2e-08 63.5 176 34.1
Hma1.2p1_0088F.1_g045026 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.9e-08 63.2 98 44.9
Hma1.2p1_0088F.1_g045040 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 2.9e-08 63.2 98 44.9
Thecc.02G005300 Theobroma cacao HOM05D003807 ORTHO05D002847 2.9e-08 63.2 177 35.6
CiPaw.10G062400 Carya illinoinensis HOM05D003807 ORTHO05D002847 5.0e-08 62.4 139 36.0
Eucgr.D00026 Eucalyptus grandis HOM05D003807 ORTHO05D002847 5.0e-08 62.4 174 34.5
Lalb_Chr18g0052151 Lupinus albus HOM05D003807 ORTHO05D002847 5.0e-08 62.4 56 58.9
Medtr4g094698 Medicago truncatula HOM05D003807 ORTHO05D002847 6.5e-08 62.0 99 45.5
Gorai.008G049400 Gossypium raimondii HOM05D003807 ORTHO05D002847 8.5e-08 61.6 148 35.8
Sc05g0004730 Simmondsia chinensis HOM05D003807 ORTHO05D002847 8.5e-08 61.6 128 35.2
TPR.G31240 Trifolium pratense HOM05D003807 ORTHO05D002847 8.5e-08 61.6 128 39.1
Gohir.A12G048100 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.1e-07 61.2 68 51.5
Cpa.g.sc30.131 Carica papaya HOM05D003807 ORTHO05D002847 1.4e-07 60.8 76 44.7
Gohir.D12G046900 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.4e-07 60.8 167 34.1
Solyc07g043250.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 1.4e-07 60.8 119 39.5
Oeu052638.1 Olea europaea HOM05D003807 ORTHO05D002847 1.9e-07 60.5 142 32.4
Sed0022416 Sechium edule HOM05D003807 ORTHO05D002847 3.2e-07 59.7 59 50.8
Sed0023526 Sechium edule HOM05D003807 ORTHO05D002847 3.2e-07 59.7 57 54.4
Potri.006G006300 Populus trichocarpa HOM05D001711 ORTHO05D002847 4.2e-07 59.3 107 41.1
Cpa.g.sc30.129 Carica papaya HOM05D003807 ORTHO05D002847 5.5e-07 58.9 58 48.3
COL.COLO4_17629 Corchorus olitorius HOM05D003807 ORTHO05D002847 5.5e-07 58.9 210 28.6
Glyma.08G087400 Glycine max HOM05D003807 ORTHO05D002847 5.5e-07 58.9 84 48.8
PGR004G1269 Punica granatum HOM05D003807 ORTHO05D002847 5.5e-07 58.9 81 43.2
CiPaw.03G111200 Carya illinoinensis HOM05D001711 ORTHO05D002847 7.2e-07 58.5 110 40.0
SGA_v2.0_scaffold175G39345 Striga asiatica HOM05D003807 ORTHO05D002847 7.2e-07 58.5 139 36.7
Glyma.05G133000 Glycine max HOM05D003807 ORTHO05D002847 9.3e-07 58.2 90 45.6
Medtr3g081500 Medicago truncatula HOM05D001711 ORTHO05D002847 9.3e-07 58.2 70 48.6
PGSC0003DMG400011745 Solanum tuberosum HOM05D003807 ORTHO05D002847 9.3e-07 58.2 151 35.1
ClCG07G010990 Citrullus lanatus HOM05D001711 ORTHO05D002847 1.2e-06 57.8 89 46.1
Nn7g38292 Nelumbo nucifera HOM05D001711 ORTHO05D002847 1.2e-06 57.8 55 54.5
SGA_v2.0_scaffold175G39346 Striga asiatica HOM05D003807 ORTHO05D002847 1.2e-06 57.8 77 46.8
arahy.Tifrunner.gnm1.ann1.H0VTBF Arachis hypogaea HOM05D003807 ORTHO05D002847 1.6e-06 57.4 152 31.6
Gohir.D11G162700 Gossypium hirsutum HOM05D001711 ORTHO05D002847 1.6e-06 57.4 95 45.3
Gorai.007G173300 Gossypium raimondii HOM05D001711 ORTHO05D002847 1.6e-06 57.4 95 45.3
Peaxi162Scf00393g00062 Petunia axillaris HOM05D001711 ORTHO05D002847 1.6e-06 57.4 100 40.0
TWI60G0522 Tripterygium wilfordii HOM05D001711 ORTHO05D002847 1.6e-06 57.4 67 50.7
A01p22390 Brassica napus HOM05D003807 ORTHO05D002847 2.1e-06 57.0 124 33.9
CsaV3_4G007280 Cucumis sativus L. HOM05D001711 ORTHO05D002847 2.1e-06 57.0 41 73.2
Duzib133G1073 Durio zibethinus HOM05D001711 ORTHO05D002847 2.1e-06 57.0 139 38.8
Thecc.01G173400 Theobroma cacao HOM05D001711 ORTHO05D002847 2.1e-06 57.0 110 41.8
Phvul.006G002700 Phaseolus vulgaris HOM05D001711 ORTHO05D002847 2.7e-06 56.6 50 60.0
Cfa022497 Carpinus fangiana HOM05D001711 ORTHO05D002847 3.6e-06 56.2 131 37.4
Eucgr.K01342 Eucalyptus grandis HOM05D001711 ORTHO05D002847 3.6e-06 56.2 55 54.5
Sp3g19970 Schrenkiella parvula HOM05D003807 ORTHO05D002847 3.6e-06 56.2 129 34.9
Duzib211G0113 Durio zibethinus HOM05D001711 ORTHO05D002847 4.6e-06 55.8 94 42.6
Duzib248G1013 Durio zibethinus HOM05D003807 ORTHO05D002847 4.6e-06 55.8 83 42.2
Oeu003076.1 Olea europaea HOM05D001711 ORTHO05D002847 4.6e-06 55.8 111 37.8
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 4.6e-06 55.8 54 53.7
COL.COLO4_17627 Corchorus olitorius HOM05D003807 ORTHO05D002847 6.1e-06 55.5 220 32.7
MELO3C007028.2 Cucumis melo HOM05D003807 ORTHO05D002847 6.1e-06 55.5 109 36.7
Migut.M00092 Erythranthe guttata HOM05D001711 ORTHO05D002847 6.1e-06 55.5 47 61.7
RcHm_v2.0_Chr2g0153531 Rosa chinensis HOM05D003807 ORTHO05D002847 6.1e-06 55.5 55 58.2
Sabra16G0020100 Salix brachista HOM05D001711 ORTHO05D002847 6.1e-06 55.5 54 53.7
VMungo0251G2884 Vigna mungo HOM05D003807 ORTHO05D002847 6.1e-06 55.5 84 44.0
MELO3C016231.2 Cucumis melo HOM05D001711 ORTHO05D002847 7.9e-06 55.1 96 43.8
LjContig00081g0007494 Lotus japonicus HOM05D001711 ORTHO05D002847 7.9e-06 55.1 40 70.0


User provided reference genes

Program Settings