Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 6.5e-145 517.3 249 100.0
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.8e-78 296.6 144 93.1
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 1.8e-78 296.6 159 85.5
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 1.2e-77 293.9 144 90.3
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 4.4e-77 292.0 144 91.7
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 5.8e-77 291.6 144 91.7
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 3.9e-73 278.9 165 78.2
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 8.7e-73 277.7 144 84.7
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 1.9e-72 276.6 144 85.4
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 2.1e-71 273.1 144 84.0
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 2.8e-71 272.7 144 84.0
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.8e-71 272.7 144 84.0
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 2.8e-71 272.7 144 82.6
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 4.7e-71 271.9 144 83.3
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 8.1e-71 271.2 144 82.6
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 3.1e-70 269.2 144 83.3
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.2e-69 267.3 144 80.6
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.2e-69 267.3 144 81.9
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 1.2e-69 267.3 144 82.6
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 4.4e-69 265.4 144 80.6
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 7.6e-69 264.6 144 79.2
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 7.6e-69 264.6 145 82.1
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 9.9e-69 264.2 143 83.9
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 3.8e-68 262.3 145 81.4
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 8.4e-68 261.2 144 81.2
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 8.4e-68 261.2 144 81.2
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 2.4e-67 259.6 155 77.4
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 3.2e-67 259.2 156 75.6
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.2e-67 259.2 140 82.9
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 3.2e-67 259.2 146 80.1
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.2e-67 258.8 144 80.6
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 4.2e-67 258.8 144 79.2
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 4.2e-67 258.8 144 77.1
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 5.4e-67 258.5 144 79.9
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 7.1e-67 258.1 144 81.9
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.2e-66 257.3 144 79.9
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 2.1e-66 256.5 144 78.5
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 2.1e-66 256.5 144 79.2
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 2.7e-66 256.1 144 77.8
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 2.7e-66 256.1 144 75.7
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 3.5e-66 255.8 144 78.5
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 3.5e-66 255.8 144 79.2
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 4.6e-66 255.4 144 77.8
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 4.6e-66 255.4 144 79.2
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 4.6e-66 255.4 144 77.8
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 77.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 77.8
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 77.8
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 77.8
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 78.5
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 6.0e-66 255.0 144 77.1
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 7.8e-66 254.6 144 77.8
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.0e-65 254.2 144 78.5
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 1.0e-65 254.2 144 78.5
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.3e-65 253.8 144 77.1
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 3.0e-65 252.7 144 78.5
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 5.1e-65 251.9 138 80.4
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 6.6e-65 251.5 144 77.1
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 8.7e-65 251.1 144 77.1
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.5e-64 250.4 144 78.5
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.5e-64 250.4 144 78.5
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.5e-64 250.4 144 76.4
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 1.9e-64 250.0 144 77.1
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.5e-64 249.6 144 78.5
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 3.3e-64 249.2 144 79.2
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 4.3e-64 248.8 144 77.1
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 7.3e-64 248.1 145 77.2
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 7.3e-64 248.1 144 75.0
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 2.1e-63 246.5 144 75.0
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 3.6e-63 245.7 144 75.0
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 3.6e-63 245.7 144 77.1
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 4.8e-63 245.4 147 76.2
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 6.2e-63 245.0 144 76.4
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 1.1e-62 244.2 144 76.4
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 1.8e-62 243.4 144 77.8
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.2e-61 240.7 136 77.9
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 1.3e-60 237.3 144 72.9
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 5.4e-59 231.9 181 59.7
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 9.3e-59 231.1 255 52.2
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 1.6e-58 230.3 144 69.4
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 3.0e-57 226.1 140 72.1
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.1e-54 217.6 143 68.5
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.2e-53 214.2 141 65.2
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 7.6e-53 211.5 144 69.4
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 1.9e-51 206.8 241 46.1
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 1.2e-50 204.1 105 87.6
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.1e-50 203.4 153 63.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.9e-48 196.8 105 84.8
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.1e-46 191.0 139 61.9
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 1.1e-43 181.0 137 60.6
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.4e-43 180.6 142 57.7
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 4.2e-43 179.1 143 58.0
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 9.3e-43 177.9 88 89.8
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 1.6e-34 150.6 83 77.1
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.8e-33 147.1 82 76.8
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 5.1e-33 145.6 91 69.2
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 1.3e-31 141.0 82 73.2
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 2.4e-30 136.7 82 70.7
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 1.2e-29 134.4 95 67.4
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 1.0e-28 131.3 82 65.9
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 2.2e-28 130.2 84 76.2
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.6e-26 124.0 65 84.6
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 4.7e-26 122.5 62 87.1
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 2.8e-23 113.2 66 77.3
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 3.6e-18 96.3 69 65.2
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 1.7e-12 77.4 43 79.1


User provided reference genes

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