Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008946g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.2e-49 197.2 121 100.0
Nitab4.5_0015725g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.7e-27 125.6 134 67.9
Nitab4.5_0000381g0310 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.2e-20 102.1 117 56.4
Nitab4.5_0015192g0020 Nicotiana tabacum HOM05D000017 ORTHO05D282583 4.6e-19 98.2 127 49.6
Nitab4.5_0006785g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-13 79.7 46 87.0
Nitab4.5_0006809g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.2e-13 79.3 46 89.1
Nitab4.5_0000495g0190 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.7e-13 78.6 46 87.0
Nitab4.5_0001839g0080 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.7e-13 78.6 45 88.9
Nitab4.5_0002172g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.9e-13 78.2 46 84.8
Nitab4.5_0003518g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.4e-13 77.8 45 86.7
Nitab4.5_0001288g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-12 76.3 119 45.4
Nitab4.5_0000072g0580 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-11 73.6 43 88.4
Nitab4.5_0001839g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 1.2e-11 73.6 46 80.4
Nitab4.5_0007142g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.7e-11 72.4 49 75.5
Nitab4.5_0002608g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.9e-10 68.6 41 80.5
Nitab4.5_0005741g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.1e-09 67.0 46 80.4
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.3e-09 65.1 38 78.9
Nitab4.5_0000143g0500 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-08 63.2 38 76.3
Nitab4.5_0011664g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.1e-08 62.8 35 88.6
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-08 62.4 38 76.3
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.8e-08 62.4 38 76.3
Nitab4.5_0000270g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.6e-08 62.0 37 83.8
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.7e-08 61.6 38 73.7
Nitab4.5_0000129g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.7e-08 61.6 58 51.7
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.7e-08 61.6 49 61.2
Nitab4.5_0001172g0130 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.7e-08 61.6 65 50.8
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.7e-08 61.6 50 54.0
Nitab4.5_0000923g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.2e-08 61.2 49 57.1
Nitab4.5_0001544g0080 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.2e-08 61.2 35 88.6
Nitab4.5_0000100g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.4e-07 60.1 48 62.5
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.8e-07 59.7 37 75.7
Nitab4.5_0002569g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-07 59.3 38 71.1
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.3e-07 59.3 50 54.0
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.1e-07 58.9 38 73.7
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.1e-07 58.9 38 73.7
Nitab4.5_0001651g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.0e-07 58.5 38 71.1
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.2e-07 58.2 37 73.0
Nitab4.5_0008808g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.8e-07 57.8 37 73.0
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 6.8e-07 57.8 50 52.0
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 6.8e-07 57.8 51 52.9
Nitab4.5_0001219g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-06 57.0 38 71.1
Nitab4.5_0002307g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-06 57.0 63 50.8
Nitab4.5_0001701g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-06 56.6 35 74.3
Nitab4.5_0012769g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.5e-06 56.6 42 64.3
Nitab4.5_0000052g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.0e-06 56.2 38 68.4
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.6e-06 55.8 38 68.4
Nitab4.5_0001038g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.6e-06 55.8 38 71.1
Peaxi162Scf00081g00111 Petunia axillaris HOM05D000017 ORTHO05D009364 2.6e-06 55.8 44 54.5
Nitab4.5_0000058g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.4e-06 55.1 46 58.7
PGSC0003DMG400005809 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.4e-06 55.1 45 55.6
Nitab4.5_0003187g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.8e-06 54.7 40 65.0
Nitab4.5_0005529g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.8e-06 54.7 40 65.0
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 5.8e-06 54.7 50 48.0
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 5.8e-06 54.7 50 48.0
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 5.8e-06 54.7 50 48.0
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 5.8e-06 54.7 50 48.0
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 5.8e-06 54.7 50 48.0
Solyc03g096305.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 7.6e-06 54.3 45 51.1
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 9.9e-06 53.9 44 56.8
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.9e-06 53.9 35 68.6
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 9.9e-06 53.9 44 52.3
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 9.9e-06 53.9 49 49.0


User provided reference genes

Program Settings