Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 0.0e+00 1426.8 728 100.0
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 0.0e+00 1331.6 749 91.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 0.0e+00 1183.3 743 83.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 0.0e+00 1083.9 687 82.2
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 8.8e-251 870.5 774 60.7
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 4.0e-243 845.1 768 61.5
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.7e-241 838.6 774 60.6
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 7.3e-237 824.3 795 58.9
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.3e-235 819.3 773 59.4
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 2.3e-230 802.7 762 57.9
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.3e-227 792.7 759 57.4
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.4e-225 784.6 777 57.4
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 3.5e-223 778.9 741 58.6
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 4.6e-223 778.5 683 61.3
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 8.6e-222 774.2 704 59.4
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 4.3e-221 771.9 710 59.6
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.6e-220 770.0 763 55.4
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.6e-220 770.0 640 62.2
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 3.6e-220 768.8 619 63.0
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 5.8e-218 761.5 625 63.0
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 9.8e-218 760.8 585 65.1
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 9.8e-218 760.8 591 64.0
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.3e-217 760.4 612 63.2
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.7e-217 760.0 771 56.2
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 3.7e-217 758.8 770 56.1
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 6.4e-217 758.1 754 57.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.4e-216 756.9 601 64.2
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 4.1e-216 755.4 754 54.9
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 9.2e-216 754.2 765 56.1
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.6e-215 753.4 631 61.3
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.1e-215 753.1 550 67.5
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 6.0e-215 751.5 709 56.7
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.7e-214 750.0 806 53.8
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 3.0e-214 749.2 760 55.3
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 3.6e-212 742.3 777 55.5
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 6.2e-212 741.5 653 59.7
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 2.3e-211 739.6 687 57.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.2e-210 737.3 726 57.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 2.2e-209 733.0 791 54.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 7.1e-208 728.0 719 54.7
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.1e-207 726.5 769 52.8
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 2.1e-207 726.5 771 54.0
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 6.0e-207 724.9 596 62.4
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.7e-206 723.4 776 53.2
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 3.9e-206 722.2 654 59.0
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 8.6e-206 721.1 753 52.7
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 8.6e-206 721.1 632 57.6
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.5e-205 720.3 771 54.2
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 3.3e-205 719.2 751 52.5
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 3.3e-205 719.2 668 58.4
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.1e-204 716.5 780 53.7
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.8e-203 713.4 658 57.9
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 6.9e-203 711.4 661 58.5
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 4.4e-202 708.8 767 51.6
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 4.9e-201 705.3 764 52.5
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.9e-200 703.4 761 52.4
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 4.2e-200 702.2 777 52.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 4.2e-200 702.2 674 56.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.2e-199 700.7 754 52.1
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 2.7e-199 699.5 747 52.6
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.0e-198 697.6 760 52.5
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.5e-197 693.7 658 57.4
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 3.3e-197 692.6 660 57.4
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 4.3e-197 692.2 736 52.6
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.3e-196 690.6 586 60.1
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 4.8e-196 688.7 1064 43.6
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 3.1e-195 686.0 547 64.0
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.6e-191 673.7 596 56.7
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 6.0e-191 671.8 593 58.2
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 5.1e-190 668.7 760 50.3
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-188 664.1 795 49.7
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.8e-188 662.9 832 49.9
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.7e-185 653.7 602 55.8
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 9.3e-184 647.9 660 54.5
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 3.5e-183 646.0 700 49.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 7.4e-181 638.3 743 50.2
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.3e-180 637.5 670 52.4
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.2e-180 635.2 758 50.0
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.1e-179 634.4 506 61.7
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.0e-177 627.9 685 50.1
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.6e-170 603.2 626 51.8
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 9.3e-168 594.7 783 47.0
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 3.6e-167 592.8 634 50.0
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 5.1e-166 589.0 634 51.3
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 6.7e-166 588.6 711 47.7
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.4e-163 580.9 714 47.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.3e-163 578.9 654 49.5
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.2e-159 567.8 614 50.5
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 2.1e-159 567.0 358 79.6
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.3e-157 559.7 665 47.5
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 6.3e-156 555.4 639 50.2
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.2e-156 555.1 678 50.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 3.9e-150 536.2 715 42.2
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 3.5e-146 523.1 522 51.9
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 4.5e-146 522.7 311 84.2
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 5.9e-146 522.3 672 43.5
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.6e-143 513.1 378 66.7
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 2.2e-140 503.8 355 77.2
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.5e-136 491.1 698 45.7
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 2.5e-136 490.3 631 44.2
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.7e-135 486.9 377 65.5
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 3.6e-135 486.5 576 49.3
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.8e-127 460.3 509 47.3
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 5.7e-125 452.6 394 59.6
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.7e-116 424.5 549 49.7
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.4e-110 404.8 276 67.0
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.4e-109 399.8 319 62.4
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 5.0e-105 386.3 454 52.2
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.4e-99 366.3 329 55.6
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 7.8e-98 362.5 442 41.9
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 2.3e-97 360.9 481 43.5
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 8.9e-94 349.0 494 40.3
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 5.4e-91 339.7 308 62.3
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.7e-89 334.7 516 37.8
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 4.3e-88 330.1 351 50.7
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-85 321.6 531 42.4
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.8e-79 300.8 491 35.8
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.8e-79 300.8 512 42.0
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.6e-77 294.3 323 53.9
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.7e-68 265.0 267 53.9
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.5e-66 257.3 156 80.8
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 6.0e-66 256.5 582 29.9
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.1e-65 253.4 215 59.1
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 2.5e-56 224.6 282 45.7
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.3e-56 224.2 147 70.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 3.7e-55 220.7 139 73.4
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 5.3e-54 216.9 147 72.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.9e-52 211.1 237 47.3
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.8e-52 210.7 135 73.3
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 8.5e-52 209.5 277 46.9
PGSC0003DMG400008511 Solanum tuberosum HOM05D000751 ORTHO05D005618 9.4e-51 206.1 187 69.5
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 6.1e-50 203.4 197 55.3
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 2.5e-48 198.0 327 41.3
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 4.1e-46 190.7 198 53.5
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 8.8e-41 172.9 286 38.8
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.7e-39 168.7 288 42.0
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 3.8e-36 157.5 118 69.5
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-32 145.6 92 76.1
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.0e-32 145.2 84 82.1
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 2.2e-31 141.7 102 72.5
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 5.3e-30 137.1 271 33.6
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-28 132.1 67 94.0
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 2.9e-28 131.3 360 33.1
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.9e-27 128.6 297 38.0
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 2.5e-27 128.3 83 73.5
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 5.7e-24 117.1 86 66.3
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 4.1e-22 110.9 70 78.6
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.7e-21 108.2 254 35.8
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.5e-21 107.8 92 62.0
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.3e-20 105.9 124 48.4
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.5e-19 102.4 68 63.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.8e-17 95.5 94 57.4
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.7e-15 87.8 80 58.8
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.9e-09 66.6 55 61.8
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 4.9e-07 60.8 101 38.6
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 4.9e-07 60.8 79 41.8


User provided reference genes

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