Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 0.0e+00 1205.7 653 100.0
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 0.0e+00 1099.7 659 92.0
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 3.3e-289 998.0 658 85.0
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 4.3e-289 997.7 658 84.2
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 8.4e-168 594.7 672 53.6
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 3.5e-158 562.8 660 57.7
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 1.4e-154 550.8 684 55.0
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 5.3e-154 548.9 684 55.0
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 2.1e-150 537.0 656 55.5
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 2.3e-149 533.5 379 81.8
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.1e-148 531.2 673 54.5
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.1e-147 526.9 670 51.2
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 3.7e-147 526.2 383 83.3
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 9.0e-146 521.5 657 53.1
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 1.5e-145 520.8 669 55.8
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.9e-144 515.8 670 54.5
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 9.3e-143 511.5 647 55.2
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 1.9e-140 503.8 680 52.8
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.2e-137 494.6 647 53.5
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 5.0e-136 489.2 670 51.2
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 4.2e-135 486.1 712 48.0
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 3.6e-134 483.0 632 51.6
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 1.0e-133 481.5 689 48.6
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.0e-133 481.5 681 47.0
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 2.3e-133 480.3 648 48.1
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 7.4e-132 475.3 689 47.8
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 3.7e-131 473.0 664 48.9
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 4.8e-131 472.6 678 47.8
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 6.3e-131 472.2 683 48.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 1.1e-130 471.5 681 46.4
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.4e-130 471.1 675 47.3
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.4e-130 470.3 679 46.5
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.2e-129 468.0 675 47.1
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.5e-129 467.6 665 52.0
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 2.9e-128 463.4 560 55.5
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 4.2e-127 459.5 640 48.3
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 7.2e-127 458.8 664 47.0
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 2.1e-126 457.2 273 86.8
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 4.7e-126 456.1 713 45.3
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 9.7e-124 448.4 685 46.7
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 2.8e-123 446.8 668 45.7
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 3.7e-123 446.4 625 48.2
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 6.3e-123 445.7 576 52.6
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 6.3e-123 445.7 653 47.3
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 8.2e-123 445.3 674 47.0
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 2.6e-121 440.3 576 52.3
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 4.5e-121 439.5 658 45.3
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 5.9e-121 439.1 276 83.0
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 4.4e-116 422.9 646 43.8
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 2.2e-115 420.6 668 47.6
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 2.2e-115 420.6 576 47.6
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.2e-113 414.8 605 45.3
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 5.9e-113 412.5 625 44.5
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 1.5e-111 407.9 634 44.8
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 1.2e-110 404.8 448 58.0
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.0e-101 375.2 445 56.6
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 3.0e-101 373.6 550 48.7
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 1.5e-100 371.3 468 55.8
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 2.2e-99 367.5 461 57.5
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 3.0e-93 347.1 579 45.3
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 2.3e-88 330.9 302 62.9
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 4.6e-73 280.0 300 53.7
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 4.6e-73 280.0 440 45.5
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.7e-72 278.1 491 42.8
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 8.9e-69 265.8 565 38.9
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 7.3e-63 246.1 685 33.6
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.1e-61 242.3 566 36.6
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 4.9e-59 233.4 642 34.6
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 4.2e-58 230.3 228 56.1
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 1.1e-47 195.7 234 48.3
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 2.5e-47 194.5 216 53.7
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 2.4e-42 177.9 221 51.6
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 1.3e-32 145.6 311 35.4
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 3.0e-32 144.4 509 35.2
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.9e-31 141.7 164 48.8
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 7.4e-31 139.8 234 37.6
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 9.0e-29 132.9 164 46.3
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.4e-27 126.3 288 34.7
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 4.2e-26 124.0 139 55.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.2e-25 122.5 230 33.5
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.5e-25 120.9 309 29.4
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.5e-25 120.9 309 29.4
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 2.8e-22 111.3 224 37.1
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.7e-22 110.9 309 30.7
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.4e-16 92.4 272 28.3
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 9.7e-15 86.3 128 48.4
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 9.7e-15 86.3 464 27.8
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 1.8e-13 82.0 229 29.7
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 5.0e-11 73.9 220 28.2
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 2.7e-09 68.2 106 43.4
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 2.7e-09 68.2 218 27.1
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 6.1e-09 67.0 234 24.4
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 7.9e-09 66.6 225 24.9
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 7.9e-09 66.6 233 26.6
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 1.0e-08 66.2 203 28.6
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 1.0e-08 66.2 236 25.0
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.8e-08 65.5 237 27.8
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 2.3e-08 65.1 216 25.5
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 2.3e-08 65.1 237 26.6
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 2.3e-08 65.1 215 27.0
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 3.0e-08 64.7 147 32.7
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 3.0e-08 64.7 235 25.1
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 3.0e-08 64.7 237 27.8
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 3.0e-08 64.7 236 25.8
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.7e-08 63.5 237 27.8
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 8.8e-08 63.2 204 26.5
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 8.8e-08 63.2 204 26.5
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.5e-07 62.4 213 25.4
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 2.0e-07 62.0 224 24.1
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 3.3e-07 61.2 206 24.3
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 5.7e-07 60.5 216 26.9
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 7.4e-07 60.1 220 24.5
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 7.4e-07 60.1 203 25.6
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 9.7e-07 59.7 221 27.1
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 1.3e-06 59.3 257 24.1
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.3e-06 59.3 214 24.8
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 1.3e-06 59.3 223 24.2
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.2e-06 58.5 234 24.8
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 2.2e-06 58.5 216 24.5
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 2.2e-06 58.5 203 26.1
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 2.2e-06 58.5 198 23.7
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 2.2e-06 58.5 118 33.1
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 2.8e-06 58.2 204 25.0
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 2.8e-06 58.2 222 25.2
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.8e-06 58.2 235 25.5
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.7e-06 57.8 214 24.8
Actinidia36758 Actinidia chinensis HOM05D007670 ORTHO05D009646 4.8e-06 57.4 78 46.2
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 4.8e-06 57.4 236 25.4
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 4.8e-06 57.4 203 25.6
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 4.8e-06 57.4 224 25.9
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 4.8e-06 57.4 224 25.9
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 6.3e-06 57.0 214 25.2
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 6.3e-06 57.0 273 24.5
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 6.3e-06 57.0 204 27.0
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 6.3e-06 57.0 203 24.6
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 8.2e-06 56.6 222 24.8


User provided reference genes

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