Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008901g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.8e-40 168.7 80 100.0
Nitab4.5_0010583g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.1e-28 127.1 64 92.2
Nitab4.5_0000379g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.0e-27 124.8 64 90.6
Nitab4.5_0006458g0040 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.5e-26 122.5 64 87.5
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-25 119.0 64 87.5
Nitab4.5_0021473g0010 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.3e-25 117.1 64 84.4
Nitab4.5_0027109g0010 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.3e-25 117.1 57 93.0
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-24 115.5 63 85.7
Nitab4.5_0000067g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.9e-24 113.6 64 82.8
Nitab4.5_0011727g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 9.1e-24 113.2 63 81.0
Nitab4.5_0000980g0080 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.2e-23 112.8 64 81.2
Nitab4.5_0012303g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-23 110.9 58 87.9
Sopen05g015880 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-23 110.5 64 76.6
Sopen09g020250 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-23 110.5 64 76.6
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-23 110.5 64 76.6
Sopen06g011940 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-21 104.8 64 71.9
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-20 101.7 64 75.0
Nitab4.5_0003061g0030 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.6e-20 101.3 64 75.0
Sopen01g014170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-19 99.0 64 70.3
Nitab4.5_0004510g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-19 98.2 58 75.9
Sopen08g004190 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-19 98.2 60 73.3
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.7e-19 97.1 64 76.6
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-19 96.7 47 93.6
Sopen06g011270 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-19 96.7 64 70.3
Sopen09g026440 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-18 96.3 64 70.3
Sopen12g007420 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-18 96.3 64 70.3
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-17 90.9 60 68.3
Nitab4.5_0000134g0100 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.3e-17 90.5 55 76.4
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.4e-16 89.4 54 77.8
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 7.0e-16 87.0 59 69.5
Sopen04g016440 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-15 85.1 67 58.2
Sopen08g018780 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-15 85.1 67 58.2
Sopen02g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-15 83.6 60 63.3
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen05g013600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen10g020700 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-14 82.4 64 59.4
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-14 81.6 60 61.7
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-14 80.1 67 55.2
Sopen11g020500 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-12 74.7 60 56.7
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-11 71.6 47 68.1
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-10 67.4 78 41.0
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 6.3e-09 63.9 75 40.0
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-09 63.5 62 45.2
CANSAT21G2462 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 62.4 61 47.5
Nitab4.5_0006294g0120 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.8e-08 62.4 59 44.1
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.4e-08 62.0 61 47.5
CANSAT35G1556 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 62.0 61 47.5
CANSAT54G0260 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 62.0 61 47.5
CANSAT54G2395 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 62.0 61 47.5
CANSAT01G2945 Cannabis sativa HOM05D000017 ORTHO05D000013 7.0e-08 60.5 78 41.0
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-08 60.1 78 39.7
CANSAT54G0096 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-08 60.1 78 41.0
CANSAT56G3886 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-08 60.1 78 41.0
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-08 60.1 78 41.0
CANSAT01G1372 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT11G0224 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 63 42.9
CANSAT21G2557 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT25G1804 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT64G1246 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT80G0531 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT80G0838 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT80G2093 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 59.7 78 39.7
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 59.3 61 47.5
CANSAT54G1422 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 59.3 61 47.5
CANSAT64G0736 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 59.3 61 47.5
CANSAT78G1192 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 59.3 61 47.5
CANSAT80G0068 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 59.3 58 48.3
CANSAT01G0280 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT01G1536 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT25G3531 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT35G0491 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT56G2425 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT78G2080 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
CANSAT80G0876 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 58.9 63 42.9
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-07 58.5 30 83.3
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 61 45.9
CANSAT21G0206 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 78 39.7
CANSAT21G0539 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 78 38.5
CANSAT54G0189 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 59 42.4
CANSAT78G0359 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 75 41.3
CANSAT78G2460 Cannabis sativa HOM05D000017 ORTHO05D000013 3.5e-07 58.2 59 45.8
CANSAT56G0518 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-07 57.8 59 45.8
Nitab4.5_0002908g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.5e-07 57.8 55 43.6
CANSAT80G0400 Cannabis sativa HOM05D000017 ORTHO05D000013 5.9e-07 57.4 61 45.9
CANSAT54G0599 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-07 57.0 63 41.3
Nitab4.5_0017747g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.0e-06 56.6 57 42.1
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.2 64 46.9
CANSAT25G1858 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.2 64 46.9
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.2 64 46.9
CANSAT54G0762 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.2 64 46.9
CANSAT36G0010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 55.8 63 41.3
CsaV3_7G024100 Cucumis sativus L. HOM05D000017 ORTHO05D000013 2.2e-06 55.5 56 42.9
Oeu000015.1 Olea europaea HOM05D000017 ORTHO05D000013 2.2e-06 55.5 58 43.1
Sopen07g013190 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-06 55.5 59 44.1
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-06 55.1 58 43.1
C04p57210 Brassica napus HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 45.8
Sopen04g032910 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 44.1
Sopen05g008000 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 44.1
Sopen07g015490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 44.1
Sopen08g005870 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 44.1
Sopen11g013400 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-06 55.1 59 44.1
CANSAT01G0792 Cannabis sativa HOM05D000017 ORTHO05D000013 3.8e-06 54.7 78 39.7
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 3.8e-06 54.7 78 41.0
CANSAT54G0555 Cannabis sativa HOM05D000017 ORTHO05D000013 3.8e-06 54.7 57 45.6
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-06 54.3 58 43.1
CANSAT35G1787 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-06 54.3 63 38.1
CANSAT78G1617 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-06 54.3 78 37.2
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 6.5e-06 53.9 58 41.4
Atru.chr12.1641 Acer truncatum HOM05D000017 ORTHO05D000013 6.5e-06 53.9 50 46.0
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 6.5e-06 53.9 58 41.4
CANSAT11G2172 Cannabis sativa HOM05D000017 ORTHO05D000013 6.5e-06 53.9 78 34.6
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 8.5e-06 53.5 58 39.7
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-06 53.5 57 45.6


User provided reference genes

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