Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008897g0030 Nicotiana tabacum HOM05D000823 ORTHO05D000088 1.0e-93 346.7 171 100.0
Nitab4.5_0000380g0010 Nicotiana tabacum HOM05D000823 ORTHO05D000088 3.4e-76 288.5 184 79.3
Nitab4.5_0001982g0130 Nicotiana tabacum HOM05D000823 ORTHO05D000088 4.1e-50 201.8 183 63.9
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 6.8e-45 184.5 183 55.2
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 6.8e-45 184.5 183 54.6
PGSC0003DMG400005893 Solanum tuberosum HOM05D000823 ORTHO05D000088 1.3e-38 163.7 179 50.8
Solyc06g074160.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.8e-37 159.8 179 51.4
Sopen06g030580 Solanum pennellii HOM05D000823 ORTHO05D000088 1.2e-36 157.1 179 50.8
Solyc06g073980.4 Solanum lycopersicum HOM05D000823 ORTHO05D000088 7.8e-33 144.4 156 53.2
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 3.8e-19 99.0 189 35.4
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 7.1e-18 94.7 185 33.0
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 1.2e-17 94.0 198 32.8
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 4.6e-17 92.0 196 31.1
RhsimUnG0104100 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.3e-16 90.5 197 31.5
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 1.9e-15 86.7 185 34.1
ECA232G4654 Erigeron canadensis HOM05D000823 ORTHO05D016096 3.3e-15 85.9 179 33.0
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 3.3e-15 85.9 196 31.1
CDE01G0565 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 7.4e-15 84.7 177 31.1
Migut.B01168 Erythranthe guttata HOM05D000823 ORTHO05D000088 3.7e-14 82.4 169 32.0
CAN.G1463.9 Capsicum annuum HOM05D000002 ORTHO05D000001 8.2e-14 81.3 105 46.7
Migut.B01167 Erythranthe guttata HOM05D000823 ORTHO05D000088 3.1e-13 79.3 178 30.3
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 3.1e-13 79.3 179 29.1
Cc00_g07580 Coffea canephora HOM05D000823 ORTHO05D000088 2.0e-12 76.6 201 29.4
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 1.3e-11 73.9 147 32.0
Lj4C136T19 Lonicera japonica HOM05D000395 ORTHO05D000088 1.3e-11 73.9 203 29.1
vmacro16013 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 3.8e-11 72.4 271 26.6
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 5.0e-11 72.0 182 31.9
Prupe.7G144100 Prunus persica HOM05D000395 ORTHO05D000088 1.1e-10 70.9 193 31.1
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-10 70.5 217 25.3
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 2.5e-10 69.7 217 29.0
Lj7A19G27 Lonicera japonica HOM05D000395 ORTHO05D000088 3.2e-10 69.3 217 29.0
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 3.2e-10 69.3 217 24.9
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 4.2e-10 68.9 239 26.4
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 4.2e-10 68.9 155 29.7
Lj6C562T8 Lonicera japonica HOM05D000823 ORTHO05D000088 5.5e-10 68.6 220 25.5
PGR044G2084 Punica granatum HOM05D000823 ORTHO05D000088 5.5e-10 68.6 190 27.4
Lsat_1_v5_gn_4_177680 Lactuca sativa HOM05D000823 ORTHO05D000088 2.1e-09 66.6 157 33.1
Lj2A600G55 Lonicera japonica HOM05D000395 ORTHO05D000088 2.1e-09 66.6 181 30.4
HPP92_014045 Vanilla planifolia HOM05D000823 ORTHO05D000088 2.1e-09 66.6 187 29.4
AUR62003248 Chenopodium quinoa HOM05D000395 ORTHO05D000088 3.5e-09 65.9 198 28.3
AUR62027222 Chenopodium quinoa HOM05D000823 ORTHO05D000088 7.9e-09 64.7 198 28.3
SalBow1G4890 Salvia bowleyana HOM05D015488 ORTHO05D023120 1.0e-08 64.3 179 27.4
Ah.09g231430 Amaranthus hybridus HOM05D017700 ORTHO05D000088 1.3e-08 63.9 215 27.4
Dinv26759 Davidia involucrata HOM05D000823 ORTHO05D000088 1.3e-08 63.9 136 30.9
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 2.3e-08 63.2 161 29.8
PSO541G0256 Papaver somniferum HOM05D000395 ORTHO05D000088 3.0e-08 62.8 161 29.2
PSO675G0610 Papaver somniferum HOM05D000888 ORTHO05D000740 3.0e-08 62.8 191 25.7
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.1e-08 62.0 210 24.8
FvH4_1g14660 Fragaria vesca HOM05D000395 ORTHO05D000088 6.7e-08 61.6 211 24.6
Oeu013043.1 Olea europaea HOM05D000823 ORTHO05D000088 6.7e-08 61.6 147 31.3
Prupe.7G144200 Prunus persica HOM05D000395 ORTHO05D000088 1.9e-07 60.1 245 23.7
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 3.3e-07 59.3 196 24.5
DCAR_010938 Daucus carota HOM05D000395 ORTHO05D000088 7.4e-07 58.2 174 25.3
Ah.06g189660 Amaranthus hybridus HOM05D000823 ORTHO05D000088 9.7e-07 57.8 56 48.2
vmacro04665 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 9.7e-07 57.8 59 47.5
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.3e-06 57.4 209 26.3
PGR083G0587 Punica granatum HOM05D000823 ORTHO05D000088 1.3e-06 57.4 194 23.2
Ah.06g189670 Amaranthus hybridus HOM05D000823 ORTHO05D000088 1.6e-06 57.0 50 54.0
Lsat_1_v5_gn_4_9001 Lactuca sativa HOM05D009784 ORTHO05D000088 1.6e-06 57.0 198 24.2
vmacro17896 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.6e-06 57.0 121 29.8
Thhalv10027164m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.2e-06 56.6 165 26.1
BcaNung05177 Brassica carinata HOM05D000888 ORTHO05D000740 2.8e-06 56.2 163 25.8
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 2.8e-06 56.2 68 39.7
DCAR_029419 Daucus carota HOM05D000823 ORTHO05D000088 3.7e-06 55.8 174 24.1
Lsat_1_v5_gn_1_43600 Lactuca sativa HOM05D000888 ORTHO05D000740 3.7e-06 55.8 172 23.8
PSO675G3266 Papaver somniferum HOM05D000395 ORTHO05D000088 4.8e-06 55.5 110 31.8
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 4.8e-06 55.5 39 61.5
EL10Ac4g09374 Beta vulgaris HOM05D000823 ORTHO05D000088 6.3e-06 55.1 170 28.8
Eucgr.H01965 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.3e-06 55.1 181 23.8
RcHm_v2.0_Chr7g0227261 Rosa chinensis HOM05D000395 ORTHO05D000088 6.3e-06 55.1 93 37.6
Migut.M00219 Erythranthe guttata HOM05D000823 ORTHO05D000088 8.2e-06 54.7 39 56.4
RcHm_v2.0_Chr7g0227351 Rosa chinensis HOM05D000395 ORTHO05D000088 8.2e-06 54.7 93 37.6


User provided reference genes

Program Settings