Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 4.3e-198 694.5 364 100.0
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.3e-178 629.8 409 84.6
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.4e-151 540.0 374 79.1
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.5e-150 536.6 369 80.8
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 9.5e-145 517.3 366 79.2
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 1.1e-129 467.2 365 71.2
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 9.9e-110 401.0 374 61.2
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.1e-105 387.5 382 59.7
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 5.8e-102 375.2 375 58.9
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 2.2e-101 373.2 378 59.5
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 8.4e-101 371.3 375 58.4
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 7.1e-100 368.2 380 58.9
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.8e-98 363.6 379 58.6
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 4.8e-96 355.5 363 56.7
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 9.0e-95 351.3 367 56.7
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 1.5e-94 350.5 382 55.5
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.6e-94 349.7 363 57.0
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 2.9e-93 346.3 371 55.3
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 7.1e-92 341.7 379 53.8
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 5.1e-90 335.5 378 52.4
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.9e-89 333.6 377 53.3
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.9e-89 333.6 372 53.8
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.5e-89 333.2 359 54.3
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.5e-89 333.2 361 55.4
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 7.4e-89 331.6 371 55.5
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 3.7e-88 329.3 366 54.1
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 4.8e-88 328.9 359 53.5
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.4e-87 327.4 465 46.5
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.4e-87 326.6 382 52.1
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 4.0e-87 325.9 378 51.6
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 6.9e-87 325.1 373 50.4
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.2e-86 324.3 373 52.5
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 2.6e-86 323.2 375 50.9
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 2.6e-86 323.2 370 53.2
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.5e-86 322.4 377 52.5
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 5.8e-86 322.0 363 54.0
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 7.6e-86 321.6 383 49.6
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.9e-85 319.7 376 52.9
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 4.9e-85 318.9 375 50.9
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 6.5e-85 318.5 411 50.9
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 8.4e-85 318.2 369 53.1
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 8.4e-85 318.2 381 49.3
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.4e-84 317.4 366 54.1
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 1.9e-84 317.0 370 53.0
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 3.2e-84 316.2 373 51.5
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 5.5e-84 315.5 377 52.3
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 9.3e-84 314.7 362 53.0
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.2e-83 314.3 387 47.5
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.6e-83 313.9 414 49.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 2.1e-83 313.5 370 52.2
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 4.6e-83 312.4 368 51.9
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 3.0e-82 309.7 376 49.7
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 8.7e-82 308.1 365 49.9
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.1e-81 307.8 358 54.2
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 4.3e-81 305.8 367 49.0
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 4.3e-81 305.8 384 50.8
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 5.7e-81 305.4 359 51.8
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 5.7e-81 305.4 367 49.0
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 1.6e-80 303.9 362 49.4
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 3.7e-80 302.8 368 51.1
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 1.4e-79 300.8 375 49.1
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 3.1e-79 299.7 364 48.4
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 9.0e-79 298.1 365 48.2
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 3.4e-78 296.2 282 57.8
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 7.7e-78 295.0 363 51.5
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.3e-77 294.3 366 47.8
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 5.0e-77 292.4 363 50.4
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 3.2e-76 289.7 269 61.0
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.4e-74 284.3 395 45.8
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 2.3e-74 283.5 371 48.2
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 5.1e-74 282.3 378 50.3
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 8.2e-72 275.0 282 55.3
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 1.1e-71 274.6 336 50.3
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 4.1e-71 272.7 235 63.8
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 2.0e-70 270.4 376 47.9
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 3.4e-70 269.6 237 62.4
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 3.0e-66 256.5 244 57.4
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 2.0e-65 253.8 252 54.4
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 3.7e-64 249.6 260 53.8
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.4e-63 247.7 234 60.7
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 3.1e-63 246.5 468 40.8
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 5.9e-62 242.3 273 52.7
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 8.5e-61 238.4 352 42.9
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 1.9e-60 237.3 358 43.9
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 4.2e-60 236.1 365 42.5
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 2.3e-58 230.3 253 54.9
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 3.9e-58 229.6 318 46.2
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 5.2e-58 229.2 251 51.8
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 7.4e-57 225.3 366 43.4
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 3.8e-53 213.0 267 50.2
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.2e-52 209.9 381 39.6
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 5.5e-52 209.1 411 37.2
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 5.5e-52 209.1 278 46.8
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.7e-51 206.8 253 49.0
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 6.1e-51 205.7 147 70.7
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.0e-50 204.9 258 51.2
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 1.4e-50 204.5 283 47.0
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 2.3e-50 203.8 388 40.2
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 2.6e-49 200.3 235 51.1
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 7.5e-49 198.7 278 46.4
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 5.5e-44 182.6 244 46.7
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 7.7e-38 162.2 298 37.6
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 7.7e-38 162.2 237 43.9
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 8.0e-35 152.1 382 32.2
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.5e-33 147.9 384 34.1
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.3e-32 142.5 278 38.8
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 5.4e-31 139.4 162 54.9
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 7.0e-31 139.0 220 43.2
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 7.8e-30 135.6 359 32.3
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 2.3e-29 134.0 151 53.0
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 2.3e-29 134.0 151 53.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 2.0e-25 120.9 192 44.8
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 8.3e-24 115.5 92 64.1
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 6.0e-22 109.4 194 40.7
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 2.3e-21 107.5 230 35.2
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 7.3e-20 102.4 117 47.9
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.7e-16 91.3 123 48.0
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.9e-16 90.5 93 54.8
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.7e-16 90.1 63 68.3
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.6e-14 84.7 280 29.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 9.5e-12 75.5 63 63.5
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.4e-10 71.6 72 56.9
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 4.0e-10 70.1 97 47.4
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 9.9e-09 65.5 57 54.4
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 9.9e-09 65.5 57 54.4
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 2.7e-06 57.4 39 69.2


User provided reference genes

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