Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 2.0e-112 409.1 202 100.0
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 2.4e-105 385.6 194 97.9
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 3.5e-96 355.1 188 91.5
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.2e-94 348.6 186 90.3
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.2e-94 348.2 186 90.9
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 5.5e-94 347.8 186 90.9
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 7.2e-94 347.4 181 91.7
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.6e-93 346.3 186 90.3
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 4.7e-93 344.7 195 84.1
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 4.7e-93 344.7 181 90.6
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 2.3e-92 342.4 182 90.1
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 2.3e-92 342.4 182 90.1
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 2.0e-91 339.3 186 88.2
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 1.7e-90 336.3 186 84.4
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 1.7e-90 336.3 186 84.4
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.8e-90 335.5 186 83.9
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.8e-90 335.5 186 83.9
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 2.8e-90 335.5 186 85.5
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 3.7e-90 335.1 186 87.1
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 4.8e-90 334.7 185 85.4
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 8.3e-90 334.0 186 83.3
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 1.1e-89 333.6 186 82.8
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 1.4e-89 333.2 186 84.9
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 1.8e-89 332.8 186 84.4
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 2.4e-89 332.4 188 84.0
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 3.1e-89 332.0 188 84.6
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 4.1e-89 331.6 187 84.5
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 5.3e-89 331.3 188 84.0
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 5.3e-89 331.3 186 82.3
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 7.0e-89 330.9 186 83.3
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 9.1e-89 330.5 186 83.3
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.2e-88 330.1 186 81.7
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 1.2e-88 330.1 188 84.0
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.6e-88 329.7 186 81.2
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.6e-88 329.7 186 81.2
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 2.0e-88 329.3 190 82.1
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.7e-88 328.9 186 81.7
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 3.5e-88 328.6 199 77.9
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.5e-88 328.6 186 83.9
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 4.5e-88 328.2 186 81.2
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 5.9e-88 327.8 186 82.8
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 5.9e-88 327.8 186 82.8
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 7.7e-88 327.4 186 82.3
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.7e-88 327.4 186 81.7
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 1.0e-87 327.0 186 80.6
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 1.0e-87 327.0 183 85.2
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.2e-87 325.9 187 84.0
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 2.9e-87 325.5 186 81.2
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 2.9e-87 325.5 186 82.8
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.9e-87 325.5 185 80.5
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 3.8e-87 325.1 186 80.6
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 3.8e-87 325.1 182 84.1
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 5.0e-87 324.7 185 81.6
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 8.5e-87 323.9 186 81.7
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 1.5e-86 323.2 185 81.1
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.5e-86 323.2 184 81.5
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.5e-86 323.2 186 80.1
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.9e-86 322.8 186 80.1
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 2.5e-86 322.4 184 79.9
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 4.2e-86 321.6 186 82.8
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 4.2e-86 321.6 185 80.0
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 5.5e-86 321.2 186 81.2
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 5.5e-86 321.2 186 80.6
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.5e-86 321.2 186 80.6
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.5e-86 321.2 186 80.6
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 5.5e-86 321.2 186 81.2
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 7.2e-86 320.9 186 79.6
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 7.2e-86 320.9 184 80.4
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 9.4e-86 320.5 186 80.6
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 9.4e-86 320.5 184 79.9
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 9.4e-86 320.5 186 79.0
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 1.2e-85 320.1 186 79.6
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 1.6e-85 319.7 186 81.2
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.6e-85 319.7 185 79.5
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 2.1e-85 319.3 196 78.1
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 4.7e-85 318.2 186 79.0
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 6.1e-85 317.8 186 79.6
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.4e-84 316.6 186 78.5
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.0e-84 315.5 186 80.1
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 4.0e-84 315.1 191 79.1
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 1.2e-83 313.5 191 77.0
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.5e-83 313.2 183 78.7
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 2.0e-83 312.8 183 78.7
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 2.0e-83 312.8 183 78.7
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 2.6e-83 312.4 183 78.7
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 2.6e-83 312.4 183 78.1
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 7.5e-83 310.8 183 77.0
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 9.8e-83 310.5 183 77.6
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 9.8e-83 310.5 183 78.7
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.3e-82 310.1 183 77.0
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.3e-82 310.1 183 77.0
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.3e-82 310.1 183 77.0
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.3e-82 310.1 183 77.0
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.3e-82 310.1 183 77.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 2.2e-82 309.3 183 77.0
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 2.2e-82 309.3 186 74.7
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 2.8e-82 308.9 183 76.5
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 3.7e-82 308.5 183 76.5
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 4.8e-82 308.1 183 76.5
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 2.4e-81 305.8 172 82.0
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 2.7e-80 302.4 184 77.7
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 2.9e-79 298.9 186 75.3
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 2.5e-78 295.8 197 70.1
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 2.5e-78 295.8 195 70.8
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 9.5e-78 293.9 187 74.3
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 2.1e-77 292.7 183 76.5
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 6.1e-77 291.2 187 73.8
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.8e-76 289.7 185 73.0
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 1.5e-75 286.6 186 73.7
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 3.4e-75 285.4 186 73.1
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 5.7e-75 284.6 186 72.6
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 9.8e-75 283.9 186 73.7
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 4.9e-74 281.6 186 69.9
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-73 280.4 186 72.0
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 1.8e-73 279.6 186 71.0
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 4.1e-73 278.5 186 71.5
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 7.0e-73 277.7 186 71.0
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 7.0e-73 277.7 184 69.6
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.7e-72 275.8 173 71.1
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 3.2e-65 252.3 186 63.4
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 3.6e-61 238.8 183 54.6
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 1.2e-56 223.8 181 54.7
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 9.5e-54 214.2 187 51.3
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 9.5e-54 214.2 183 53.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.6e-53 213.4 177 53.1
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 4.0e-52 208.8 172 59.3
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 5.4e-49 198.4 195 47.2
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 2.0e-43 179.9 168 49.4
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 4.6e-40 168.7 180 46.7
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 2.5e-38 162.9 89 88.8
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 1.7e-31 140.2 194 40.2
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 5.1e-23 112.1 60 86.7
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 1.9e-22 110.2 88 56.8
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 3.3e-22 109.4 157 34.4
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.1e-08 63.5 88 35.2


User provided reference genes

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