Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008842g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.3e-60 236.1 113 100.0
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Nitab4.5_0002093g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc09g061465.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Solyc11g021067.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Sopen02g009120 Solanum pennellii HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
PGSC0003DMG400020691 Solanum tuberosum HOM05D000445 ORTHO05D000314 2.1e-10 69.3 36 94.4
Peaxi162Scf00147g00038 Petunia axillaris HOM05D000445 ORTHO05D000314 6.2e-10 67.8 36 91.7
Peaxi162Scf00060g00008 Petunia axillaris HOM05D000445 ORTHO05D000314 1.1e-09 67.0 36 88.9
CAN.G1063.2 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-09 66.2 37 89.2
CAN.G1298.14 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-09 66.2 36 91.7
CAN.G201.48 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-09 66.2 36 91.7
CAN.G838.7 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-09 66.2 36 91.7
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.8e-09 66.2 36 91.7
Oeu054716.1 Olea europaea HOM05D000445 ORTHO05D000314 1.8e-09 66.2 36 88.9
CAN.G939.8 Capsicum annuum HOM05D000445 ORTHO05D000314 2.3e-09 65.9 117 41.0
Nitab4.5_0001379g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.8e-09 64.3 36 88.9
PGSC0003DMG400020534 Solanum tuberosum HOM05D000445 ORTHO05D000314 6.8e-09 64.3 36 88.9
CAN.G413.6 Capsicum annuum HOM05D000445 ORTHO05D000314 8.9e-09 63.9 36 88.9
Dinv09726 Davidia involucrata HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Dinv29308 Davidia involucrata HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Dinv39830 Davidia involucrata HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Nn233s45563 Nelumbo nucifera HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 8.9e-09 63.9 39 87.2
Nitab4.5_0023562g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.9e-09 63.9 36 88.9
Oeu012818.1 Olea europaea HOM05D000445 ORTHO05D000314 1.2e-08 63.5 36 86.1
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.2e-08 63.5 39 84.6
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.2e-08 63.5 39 84.6
Sc25g0002090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.2e-08 63.5 39 84.6
Solyc00g500147.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-08 63.5 33 90.9
Lalb_Chr01g0014981 Lupinus albus HOM05D000445 ORTHO05D000314 1.5e-08 63.2 39 87.2
Nitab4.5_0014666g0080 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.5e-08 63.2 36 86.1
Oeu062873.1 Olea europaea HOM05D000445 ORTHO05D000314 1.5e-08 63.2 36 86.1
Sopen10g008920 Solanum pennellii HOM05D000445 ORTHO05D000314 1.5e-08 63.2 36 86.1
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 2.0e-08 62.8 36 86.1
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 2.0e-08 62.8 39 84.6
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 2.0e-08 62.8 39 84.6
Nitab4.5_0005100g0080 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.6e-08 62.4 36 86.1
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 2.6e-08 62.4 39 84.6
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 2.6e-08 62.4 39 84.6
Solyc02g014790.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-08 62.4 36 83.3
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 2.6e-08 62.4 39 84.6
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
Gohir.D02G117422 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
Medtr0689s0010 Medicago truncatula HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 4.4e-08 61.6 39 84.6
CAN.G30.10 Capsicum annuum HOM05D000445 ORTHO05D000314 5.8e-08 61.2 94 41.5
Cfa015164 Carpinus fangiana HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 82.1
Nitab4.5_0003101g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.5e-08 60.8 36 83.3
Oeu051858.1 Olea europaea HOM05D000445 ORTHO05D000314 7.5e-08 60.8 36 83.3
QL01p047310 Quercus lobata HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 82.1
Sed0003894 Sechium edule HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 84.6
Sed0005242 Sechium edule HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 84.6
Sed0006678 Sechium edule HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 84.6
Sed0022464 Sechium edule HOM05D000445 ORTHO05D000314 7.5e-08 60.8 39 84.6
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 7.5e-08 60.8 61 55.7
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 9.9e-08 60.5 39 84.6
Lalb_Chr11g0063271 Lupinus albus HOM05D000445 ORTHO05D000314 9.9e-08 60.5 39 84.6
Lalb_Chr20g0118911 Lupinus albus HOM05D000445 ORTHO05D000314 9.9e-08 60.5 39 84.6
Sc02g0005240 Simmondsia chinensis HOM05D000445 ORTHO05D000314 9.9e-08 60.5 73 49.3
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 1.7e-07 59.7 39 79.5
Atru.chr13.1914 Acer truncatum HOM05D000388 ORTHO05D000473 2.2e-07 59.3 39 84.6
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.2e-07 59.3 39 82.1
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.2e-07 59.3 39 82.1
CAN.G390.23 Capsicum annuum HOM05D000445 ORTHO05D000314 2.2e-07 59.3 36 83.3
Lalb_Chr12g0206601 Lupinus albus HOM05D000445 ORTHO05D000314 2.9e-07 58.9 39 82.1
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 2.9e-07 58.9 36 77.8
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.9e-07 58.9 37 83.8
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 3.7e-07 58.5 39 79.5
Solyc03g013480.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.9e-07 58.2 35 80.0
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 8.3e-07 57.4 39 79.5
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 8.3e-07 57.4 39 79.5
SalBow1G2382 Salvia bowleyana HOM05D000445 ORTHO05D000314 1.4e-06 56.6 36 83.3
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 1.4e-06 56.6 36 83.3
Lalb_Chr13g0292611 Lupinus albus HOM05D000445 ORTHO05D000314 2.4e-06 55.8 39 79.5
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 3.2e-06 55.5 36 80.6
unitig_87.g27922 Utricularia gibba HOM05D000445 ORTHO05D000314 3.2e-06 55.5 36 80.6
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 3.2e-06 55.5 36 80.6
unitig_91.g26516 Utricularia gibba HOM05D000445 ORTHO05D000314 3.2e-06 55.5 36 80.6
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 3.2e-06 55.5 36 80.6
arahy.Tifrunner.gnm1.ann1.30KQQ0 Arachis hypogaea HOM05D000445 ORTHO05D000314 4.1e-06 55.1 39 74.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 4.1e-06 55.1 39 76.9
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 4.1e-06 55.1 39 76.9
Ah.08g222970 Amaranthus hybridus HOM05D000445 ORTHO05D000314 5.4e-06 54.7 39 76.9
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 5.4e-06 54.7 36 83.3
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 5.4e-06 54.7 41 73.2
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 5.4e-06 54.7 41 73.2
Solyc01g017120.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 9.2e-06 53.9 37 70.3


User provided reference genes

Program Settings