Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008835g0040 Nicotiana tabacum HOM05D000932 ORTHO05D000729 1.5e-212 742.7 386 100.0
Nitab4.5_0001980g0100 Nicotiana tabacum HOM05D000932 ORTHO05D000729 9.6e-180 633.6 390 87.7
CAN.G566.17 Capsicum annuum HOM05D000932 ORTHO05D000729 5.5e-151 538.1 453 71.1
Sopen12g032750 Solanum pennellii HOM05D000932 ORTHO05D000729 2.1e-142 509.6 448 69.2
PGSC0003DMG400029253 Solanum tuberosum HOM05D000932 ORTHO05D000729 2.4e-138 496.1 443 68.4
Peaxi162Scf00169g00319 Petunia axillaris HOM05D000932 ORTHO05D000729 2.3e-133 479.6 435 69.7
Peaxi162Scf00033g00307 Petunia axillaris HOM05D000932 ORTHO05D000729 6.8e-117 424.9 445 60.4
Nitab4.5_0000194g0270 Nicotiana tabacum HOM05D000932 ORTHO05D000729 1.6e-110 403.7 443 57.1
Nitab4.5_0002751g0060 Nicotiana tabacum HOM05D000932 ORTHO05D000729 4.0e-109 399.1 450 55.3
Solyc12g096940.3 Solanum lycopersicum HOM05D000932 ORTHO05D000729 7.5e-108 394.8 328 72.3
PGSC0003DMG400017148 Solanum tuberosum HOM05D000932 ORTHO05D000729 1.4e-93 347.4 433 52.4
CAN.G220.76 Capsicum annuum HOM05D000932 ORTHO05D000729 3.4e-92 342.8 444 52.7
Sopen09g033590 Solanum pennellii HOM05D000932 ORTHO05D000729 9.6e-87 324.7 428 48.6
Solyc09g090650.3 Solanum lycopersicum HOM05D000932 ORTHO05D000729 1.3e-83 314.3 428 47.7
Cc00_g29930 Coffea canephora HOM05D000932 ORTHO05D000729 2.4e-66 256.9 381 47.8
Dinv29807 Davidia involucrata HOM05D000932 ORTHO05D000729 1.9e-63 247.3 412 43.9
DCAR_030760 Daucus carota HOM05D000932 ORTHO05D000729 1.5e-60 237.7 403 44.2
DCAR_002299 Daucus carota HOM05D000932 ORTHO05D000729 1.3e-54 218.0 401 42.6
CSS0011498 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 5.9e-52 209.1 382 42.1
CSS0034563 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 1.7e-51 207.6 382 42.1
Lsat_1_v5_gn_6_66601 Lactuca sativa HOM05D000932 ORTHO05D000729 4.2e-50 203.0 387 40.1
MSTRG.9862 Avicennia marina HOM05D000932 ORTHO05D000729 1.6e-49 201.1 406 40.1
Oeu011225.1 Olea europaea HOM05D000932 ORTHO05D000729 2.1e-49 200.7 294 46.6
CSS0020646 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 3.6e-49 199.9 388 40.7
Haze_11453 Corylus avellana HOM05D000932 ORTHO05D000729 6.1e-49 199.1 378 42.3
Lj5g0023532 Lotus japonicus HOM05D000932 ORTHO05D000729 2.3e-48 197.2 374 42.2
Manes.03G159600 Manihot esculenta HOM05D000932 ORTHO05D000729 3.0e-48 196.8 381 40.9
Duzib151G0926 Durio zibethinus HOM05D000932 ORTHO05D000729 5.7e-47 192.6 378 41.3
QL06p020888 Quercus lobata HOM05D000932 ORTHO05D000729 5.7e-47 192.6 381 41.5
Thecc.04G263300 Theobroma cacao HOM05D000932 ORTHO05D000729 5.7e-47 192.6 378 43.9
Cpa.g.sc44.6 Carica papaya HOM05D000932 ORTHO05D000729 9.7e-47 191.8 376 42.3
Medtr1g073350 Medicago truncatula HOM05D000932 ORTHO05D000729 1.3e-46 191.4 378 42.3
CiPaw.01G178700 Carya illinoinensis HOM05D000932 ORTHO05D000729 6.3e-46 189.1 380 43.2
Phvul.L001944 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 6.3e-46 189.1 366 42.1
RcHm_v2.0_Chr4g0395281 Rosa chinensis HOM05D000932 ORTHO05D000729 2.4e-45 187.2 395 41.8
TPR.G28845 Trifolium pratense HOM05D000932 ORTHO05D000729 5.3e-45 186.0 375 40.3
TAR633G1858 Trochodendron aralioides HOM05D000932 ORTHO05D000729 1.2e-44 184.9 343 43.7
HanXRQChr02g0059301 Helianthus annuus HOM05D000932 ORTHO05D000729 1.5e-44 184.5 412 38.6
Prupe.1G047400 Prunus persica HOM05D000932 ORTHO05D000729 1.7e-43 181.0 392 40.8
FvH4_4g04500 Fragaria vesca HOM05D000932 ORTHO05D000729 5.0e-43 179.5 408 39.7
MD16G1225800 Malus domestica HOM05D000932 ORTHO05D000729 6.5e-43 179.1 383 39.9
Ca_09803_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 8.5e-43 178.7 378 37.6
Ca_30484_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 8.5e-43 178.7 378 37.6
FAN12G1711 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.9e-42 177.6 414 39.1
Potri.008G171500 Populus trichocarpa HOM05D000932 ORTHO05D000729 1.9e-42 177.6 371 37.2
Rhsim02G0043400 Rhododendron simsii HOM05D000932 ORTHO05D000729 2.5e-42 177.2 398 35.2
TWI73G0954 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 2.5e-42 177.2 382 41.4
FAN17G1575 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.2e-42 176.8 411 39.2
Phvul.007G270600 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 3.6e-41 173.3 372 39.0
Sabra10G0041100 Salix brachista HOM05D000932 ORTHO05D000729 3.6e-41 173.3 384 40.1
Lalb_Chr02g0150671 Lupinus albus HOM05D000932 ORTHO05D000729 4.7e-41 172.9 365 39.2
Glyma.20G200400 Glycine max HOM05D000932 ORTHO05D000729 7.9e-41 172.2 365 40.8
Duzib212G0703 Durio zibethinus HOM05D000932 ORTHO05D000729 1.0e-40 171.8 379 40.9
MD13G1220700 Malus domestica HOM05D000932 ORTHO05D000729 3.9e-40 169.9 391 39.9
vmacro15475 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 5.1e-40 169.5 397 39.0
Lsat_1_v5_gn_2_40740 Lactuca sativa HOM05D000932 ORTHO05D000729 1.1e-39 168.3 387 39.5
Nn1g02951 Nelumbo nucifera HOM05D000932 ORTHO05D000729 1.1e-39 168.3 403 38.0
VMungo0720G0467 Vigna mungo HOM05D000932 ORTHO05D000729 1.5e-39 167.9 377 38.7
FAN22G1526 Fragaria x ananassa HOM05D000932 ORTHO05D000729 2.6e-39 167.2 417 38.6
GSVIVG01027910001 Vitis vinifera HOM05D000932 ORTHO05D000729 2.6e-39 167.2 291 42.3
CANSAT78G0790 Cannabis sativa HOM05D000932 ORTHO05D000729 3.3e-39 166.8 388 41.0
Lj6g0022305 Lotus japonicus HOM05D000932 ORTHO05D000729 9.7e-39 165.2 368 36.4
Ciclev10004980m.g Citrus clementina HOM05D000932 ORTHO05D000729 2.8e-38 163.7 388 37.9
Glyma.10G190300 Glycine max HOM05D000932 ORTHO05D000729 2.8e-38 163.7 365 40.5
Glyma.10G134400 Glycine max HOM05D000932 ORTHO05D000729 8.2e-38 162.2 373 38.6
Psat6g131680 Pisum sativum HOM05D000932 ORTHO05D000729 8.2e-38 162.2 310 45.5
CiPaw.02G107500 Carya illinoinensis HOM05D000932 ORTHO05D000729 1.1e-37 161.8 380 36.8
SHI00844 Sapria himalayana HOM05D000932 ORTHO05D000729 4.1e-37 159.8 382 32.2
HanXRQChr14g0434831 Helianthus annuus HOM05D000932 ORTHO05D000729 5.3e-37 159.5 418 38.0
Lalb_Chr21g0312501 Lupinus albus HOM05D000932 ORTHO05D000729 5.3e-37 159.5 364 36.3
ClCG06G007250 Citrullus lanatus HOM05D000932 ORTHO05D000729 1.5e-36 157.9 381 34.6
Sc19g0003340 Simmondsia chinensis HOM05D000932 ORTHO05D000729 1.0e-35 155.2 427 36.8
arahy.Tifrunner.gnm1.ann1.FA5JII Arachis hypogaea HOM05D000932 ORTHO05D000729 1.3e-35 154.8 362 40.3
Lalb_Chr06g0169501 Lupinus albus HOM05D000932 ORTHO05D000729 2.2e-35 154.1 305 37.7
VMungo0720G0889 Vigna mungo HOM05D000932 ORTHO05D000729 2.2e-35 154.1 399 37.6
Gorai.011G178300 Gossypium raimondii HOM05D000932 ORTHO05D000729 6.5e-35 152.5 398 36.2
Potri.010G066100 Populus trichocarpa HOM05D000932 ORTHO05D000729 1.4e-34 151.4 421 34.9
arahy.Tifrunner.gnm1.ann1.ZRH25X Arachis hypogaea HOM05D000932 ORTHO05D000729 4.2e-34 149.8 374 34.8
Aqoxy5G00151 Aquilegia oxysepala HOM05D000932 ORTHO05D000729 9.4e-34 148.7 361 36.0
Lj6C622T6 Lonicera japonica HOM05D000932 ORTHO05D000729 9.4e-34 148.7 409 38.4
TWI09G1141 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 1.2e-33 148.3 306 37.9
Gohir.D10G158700 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.7e-33 147.1 400 34.8
arahy.Tifrunner.gnm1.ann1.22FLX8 Arachis hypogaea HOM05D000932 ORTHO05D000729 4.7e-33 146.4 374 37.2
Manes.15G045300 Manihot esculenta HOM05D000932 ORTHO05D000729 8.0e-33 145.6 374 36.9
MELO3C023041.2 Cucumis melo HOM05D000932 ORTHO05D000729 1.0e-32 145.2 397 32.0
arahy.Tifrunner.gnm1.ann1.EF48U6 Arachis hypogaea HOM05D000932 ORTHO05D000729 1.4e-32 144.8 392 37.2
Gohir.A10G109100 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.4e-32 144.8 402 35.6
Gohir.A10G109116 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.4e-32 144.8 402 35.6
PGR004G2664 Punica granatum HOM05D000932 ORTHO05D000729 1.8e-32 144.4 402 34.6
CsaV3_2G012450 Cucumis sativus L. HOM05D000932 ORTHO05D000729 3.0e-32 143.7 372 33.3
Sed0023179 Sechium edule HOM05D000932 ORTHO05D000729 1.1e-31 141.7 374 32.9
Gohir.A09G059500 Gossypium hirsutum HOM05D000932 ORTHO05D000729 9.7e-31 138.7 384 37.5
HanXRQChr01g0022961 Helianthus annuus HOM05D000932 ORTHO05D000729 2.2e-30 137.5 381 34.4
Gorai.006G073000 Gossypium raimondii HOM05D000932 ORTHO05D000729 3.7e-30 136.7 382 34.8
Gorai.005G053500 Gossypium raimondii HOM05D000932 ORTHO05D000729 1.8e-29 134.4 387 37.7
CARHR003840 Cardamine hirsuta HOM05D000932 ORTHO05D000729 3.1e-29 133.7 381 33.1
PSO541G0407 Papaver somniferum HOM05D000932 ORTHO05D000729 3.1e-29 133.7 379 33.2
ECA238G2475 Erigeron canadensis HOM05D000932 ORTHO05D000729 1.6e-28 131.3 427 32.8
AUR62016173 Chenopodium quinoa HOM05D000932 ORTHO05D000729 4.5e-28 129.8 313 33.5
Gohir.D09G058800 Gossypium hirsutum HOM05D000932 ORTHO05D000729 4.5e-28 129.8 388 36.9
DCAR_024191 Daucus carota HOM05D004122 ORTHO05D004468 5.9e-28 129.4 382 34.0
Nn3g19766 Nelumbo nucifera HOM05D000932 ORTHO05D000729 5.9e-28 129.4 383 33.7
Glyma.20G085100 Glycine max HOM05D000932 ORTHO05D000105 1.0e-27 128.6 310 36.8
Gohir.A02G042600 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.0e-27 128.6 387 37.0
Lalb_Chr01g0020301 Lupinus albus HOM05D000932 ORTHO05D000729 2.2e-27 127.5 403 34.5
Carub.0001s0370 Capsella rubella HOM05D000932 ORTHO05D000729 3.8e-27 126.7 381 32.5
Eucgr.H02954 Eucalyptus grandis HOM05D000932 ORTHO05D000729 8.5e-27 125.6 381 31.0
AUR62035091 Chenopodium quinoa HOM05D000932 ORTHO05D000729 1.1e-26 125.2 314 32.5
TPR.G23980 Trifolium pratense HOM05D000932 ORTHO05D000729 1.1e-26 125.2 296 35.1
AT1G04500 Arabidopsis thaliana HOM05D000932 ORTHO05D000729 2.5e-26 124.0 373 33.5
Eucgr.H02941 Eucalyptus grandis HOM05D000932 ORTHO05D000729 2.5e-26 124.0 381 29.9
Thhalv10007843m.g Eutrema salsugineum HOM05D000932 ORTHO05D000729 9.4e-26 122.1 369 31.4
SGA_v2.0_scaffold179G39549 Striga asiatica HOM05D000932 ORTHO05D000729 8.0e-25 119.0 372 30.1
AL1G14150 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 1.0e-24 118.6 375 32.8
HanXRQChr06g0182791 Helianthus annuus HOM05D000932 ORTHO05D000729 1.0e-24 118.6 420 32.4
Oeu064853.1 Olea europaea HOM05D000932 ORTHO05D011387 1.8e-24 117.9 212 42.5
PSO675G1743 Papaver somniferum HOM05D000932 ORTHO05D000729 4.0e-24 116.7 380 31.1
Migut.G00546 Erythranthe guttata HOM05D000932 ORTHO05D000729 2.6e-23 114.0 443 29.8
Sp1g03330 Schrenkiella parvula HOM05D000932 ORTHO05D000729 2.6e-23 114.0 372 34.1
EL10Ac3g04948 Beta vulgaris HOM05D000932 ORTHO05D000729 4.4e-23 113.2 400 31.2
SalBow3G0311 Salvia bowleyana HOM05D000932 ORTHO05D000729 7.5e-23 112.5 400 32.2
Actinidia11370 Actinidia chinensis HOM05D000932 ORTHO05D000729 1.3e-22 111.7 210 40.0
Aa31LG5G3960 Aethionema arabicum HOM05D000932 ORTHO05D000729 2.2e-22 110.9 383 34.7
BolC5t29048H Brassica oleracea HOM05D000932 ORTHO05D000729 8.2e-22 109.0 376 33.5
Aa31LG1G20370 Aethionema arabicum HOM05D000932 ORTHO05D000729 1.1e-21 108.6 383 30.5
THA.LOC104801068 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 1.4e-21 108.2 379 33.2
Lj3A649T59 Lonicera japonica HOM05D000932 ORTHO05D000729 1.8e-21 107.8 192 38.0
BraA10t42561Z Brassica rapa HOM05D000932 ORTHO05D000729 2.4e-21 107.5 369 31.2
PGR031G3329 Punica granatum HOM05D000932 ORTHO05D000729 3.1e-21 107.1 389 29.6
PGR031G3509 Punica granatum HOM05D000932 ORTHO05D000729 3.1e-21 107.1 389 29.6
Psat6g107360 Pisum sativum HOM05D000932 ORTHO05D000729 5.3e-21 106.3 312 36.5
MBI10_g27527_MAGBIO Magnolia biondii HOM05D000932 ORTHO05D000729 1.6e-20 104.8 368 31.8
unitig_32.g10856 Utricularia gibba HOM05D000932 ORTHO05D000729 7.7e-20 102.4 392 32.1
Gohir.D02G048200 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.0e-19 102.1 209 34.4
C05p02670 Brassica napus HOM05D000932 ORTHO05D000729 3.8e-19 100.1 375 33.1
Medtr1g044785 Medicago truncatula HOM05D000932 ORTHO05D000729 8.5e-19 99.0 208 34.6
A08p36900 Brassica napus HOM05D000932 ORTHO05D000729 1.1e-18 98.6 366 29.2
BraA08t35590Z Brassica rapa HOM05D000932 ORTHO05D000729 1.1e-18 98.6 366 29.2
A10p02920 Brassica napus HOM05D000932 ORTHO05D000729 1.5e-18 98.2 368 30.4
vmacro08551 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 3.2e-18 97.1 412 31.1
BcaB06g28677 Brassica carinata HOM05D000932 ORTHO05D000729 7.2e-18 95.9 393 30.0
Sp4g15660 Schrenkiella parvula HOM05D000932 ORTHO05D000729 7.2e-18 95.9 388 32.5
AL4G29000 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 2.7e-17 94.0 387 32.3
AT2G33350 Arabidopsis thaliana HOM05D000932 ORTHO05D000729 2.7e-17 94.0 388 29.4
unitig_32.g11697 Utricularia gibba HOM05D000932 ORTHO05D000729 4.7e-17 93.2 181 34.3
THA.LOC104826094 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 6.1e-17 92.8 367 31.9
Migut.N00298 Erythranthe guttata HOM05D000932 ORTHO05D000729 1.4e-16 91.7 386 32.9
CARHR127350 Cardamine hirsuta HOM05D000932 ORTHO05D000729 2.3e-16 90.9 372 33.9
Carub.0004s1497 Capsella rubella HOM05D000932 ORTHO05D000729 4.0e-16 90.1 388 33.5
C04p62810 Brassica napus HOM05D000932 ORTHO05D000729 1.5e-15 88.2 396 28.8
A04p25660 Brassica napus HOM05D000932 ORTHO05D000729 2.0e-15 87.8 396 28.8
BolC8t46918H Brassica oleracea HOM05D000932 ORTHO05D000729 2.0e-15 87.8 366 28.4
Lsat_1_v5_gn_1_75661 Lactuca sativa HOM05D000932 ORTHO05D000729 2.0e-15 87.8 379 29.6
ECA248G3283 Erigeron canadensis HOM05D000932 ORTHO05D000729 2.6e-15 87.4 379 29.0
C08p01180 Brassica napus HOM05D000932 ORTHO05D000729 3.4e-15 87.0 366 28.4
BraA04t18070Z Brassica rapa HOM05D000932 ORTHO05D000729 7.5e-15 85.9 393 27.7
Eucgr.H00131 Eucalyptus grandis HOM05D000932 ORTHO05D000729 2.8e-14 84.0 371 28.6
Actinidia39927 Actinidia chinensis HOM05D000932 ORTHO05D000729 3.7e-14 83.6 164 38.4
Ca_11908_v3 Cicer arietinum L. HOM05D000932 ORTHO05D000729 2.4e-13 80.9 161 34.2
Thhalv10016744m.g Eutrema salsugineum HOM05D000932 ORTHO05D000729 3.1e-13 80.5 423 29.3
BcaB03g13484 Brassica carinata HOM05D000932 ORTHO05D000729 7.7e-12 75.9 311 28.9
BraA05t20161Z Brassica rapa HOM05D000932 ORTHO05D000729 6.6e-11 72.8 391 27.1
A05p12170 Brassica napus HOM05D000932 ORTHO05D000729 1.1e-10 72.0 390 27.2
BcaC02g07835 Brassica carinata HOM05D000932 ORTHO05D000729 1.5e-10 71.6 393 30.5
BolC4t27764H Brassica oleracea HOM05D000932 ORTHO05D000729 1.5e-10 71.6 393 30.5
C04p15740 Brassica napus HOM05D000932 ORTHO05D000729 2.5e-10 70.9 394 26.9
BolC4t23143H Brassica oleracea HOM05D000932 ORTHO05D000729 3.3e-10 70.5 395 26.8
BcaC02g11421 Brassica carinata HOM05D000932 ORTHO05D000729 9.5e-10 68.9 363 27.5
Rhsim04G0172700 Rhododendron simsii HOM05D000932 ORTHO05D000729 1.2e-09 68.6 420 26.2
Actinidia35815 Actinidia chinensis HOM05D002111 ORTHO05D002160 3.6e-09 67.0 195 32.8
BcaB02g10553 Brassica carinata HOM05D000932 ORTHO05D000729 6.8e-08 62.8 376 26.6
MBI07_g12939_MAGBIO Magnolia biondii HOM05D000932 ORTHO05D000729 1.7e-06 58.2 384 26.6


User provided reference genes

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