Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 8.0e-158 560.5 298 100.0
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.9e-151 539.3 298 96.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.4e-125 453.4 302 83.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.1e-125 452.2 300 84.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-100 370.5 314 70.7
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 4.3e-87 325.5 304 62.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.4e-85 319.7 313 60.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.5e-84 317.0 228 73.7
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.8e-83 312.4 310 59.0
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 3.8e-83 312.4 240 69.2
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.5e-82 309.7 274 62.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 3.2e-82 309.3 298 59.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 7.2e-82 308.1 295 59.7
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.7e-81 306.2 216 72.2
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.6e-81 305.8 285 60.4
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.3e-80 303.1 295 60.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 3.0e-80 302.8 294 56.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.9e-80 302.4 313 57.8
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 6.7e-80 301.6 291 59.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.5e-79 300.4 221 70.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.9e-79 300.1 296 56.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 3.3e-79 299.3 269 63.6
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.7e-79 298.5 301 57.8
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 9.7e-79 297.7 315 57.1
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.6e-78 297.0 244 66.4
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.6e-78 297.0 299 57.5
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 4.8e-78 295.4 300 58.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.8e-77 293.5 221 69.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 5.3e-77 292.0 305 55.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.9e-77 291.6 304 55.3
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 6.9e-77 291.6 252 61.9
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 9.0e-77 291.2 244 64.3
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.0e-76 290.0 308 54.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.6e-76 289.7 302 55.0
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.6e-76 289.7 224 67.9
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.4e-76 289.3 267 61.8
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.9e-76 288.5 299 55.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 5.9e-76 288.5 249 63.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.7e-76 288.1 251 62.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 7.7e-76 288.1 226 67.7
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.0e-75 287.7 299 57.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.3e-75 287.3 259 61.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.7e-75 287.0 300 56.7
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.9e-75 286.2 270 60.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.9e-75 286.2 228 71.9
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 3.8e-75 285.8 303 55.4
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.8e-75 285.8 303 55.1
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 6.5e-75 285.0 268 59.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.1e-74 284.3 302 57.6
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 5.5e-74 282.0 226 67.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 7.2e-74 281.6 294 55.1
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 9.4e-74 281.2 296 55.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 9.4e-74 281.2 294 56.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.7e-73 279.6 253 60.9
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 7.9e-73 278.1 279 57.3
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.0e-72 276.2 193 73.1
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.9e-72 275.8 216 65.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 5.1e-72 275.4 285 56.8
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 6.7e-72 275.0 226 66.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.0e-71 273.5 302 52.6
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.6e-71 273.1 323 52.9
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.3e-71 272.7 296 56.4
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 9.7e-71 271.2 309 53.7
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.7e-70 270.4 270 60.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-70 269.6 299 55.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.7e-70 269.2 309 53.7
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 6.9e-69 265.0 202 70.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.0e-67 261.2 175 74.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.9e-67 259.6 309 52.8
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.8e-67 259.2 326 50.6
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 8.5e-67 258.1 217 63.1
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.4e-66 257.3 300 52.3
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.2e-66 256.1 217 63.1
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 5.5e-66 255.4 301 53.2
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.4e-66 254.6 305 54.8
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.9e-65 251.5 272 57.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 7.9e-65 251.5 265 57.7
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 3.0e-64 249.6 392 45.9
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.9e-64 249.2 238 58.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 6.7e-64 248.4 199 64.3
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-63 247.7 301 52.5
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.6e-63 246.5 189 68.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 7.4e-63 245.0 288 52.8
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.4e-63 245.0 315 51.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.7e-62 243.8 289 54.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.7e-62 243.8 222 59.5
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.8e-62 243.0 287 52.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.1e-61 239.6 211 57.8
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 5.9e-60 235.3 211 59.7
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-59 234.6 289 49.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.0e-59 234.6 202 59.9
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.7e-59 233.8 267 53.6
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.2e-59 233.4 342 46.5
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 6.5e-59 231.9 289 49.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.9e-58 230.3 260 55.0
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-56 224.2 184 67.4
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.1e-55 221.1 228 59.6
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 6.3e-54 215.3 222 55.0
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.0e-48 196.4 194 60.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.6e-47 193.4 141 70.2
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.4e-47 192.6 266 48.9
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.7e-47 192.2 136 69.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 4.5e-44 182.6 212 52.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.2e-42 176.4 201 45.3
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.0e-40 169.9 144 61.8
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.4e-39 166.0 286 45.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 8.3e-38 161.8 143 58.7
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.8e-37 160.6 190 53.2
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.4e-37 160.2 177 47.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 3.8e-35 152.9 267 42.7
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 5.0e-35 152.5 190 53.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 2.6e-31 140.2 172 51.2
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.4e-29 134.4 116 59.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 6.6e-27 125.6 187 42.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 4.7e-25 119.4 126 54.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.3e-22 111.3 70 88.6
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.7e-20 103.6 178 33.7
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 7.3e-18 95.5 190 33.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.2e-16 89.4 79 59.5
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.6e-12 77.8 93 50.5
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 8.6e-11 72.0 53 64.2


User provided reference genes

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