Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 4.2e-184 647.9 330 100.0
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 6.5e-177 624.0 330 96.1
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.1e-147 526.9 308 84.7
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 4.1e-147 525.0 312 85.6
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.2e-146 523.5 307 84.0
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.7e-146 522.3 307 84.4
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.5e-144 516.5 311 83.3
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 7.6e-101 371.3 307 61.2
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.3e-100 370.5 306 62.7
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.9e-100 368.6 293 65.5
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.4e-99 367.1 305 61.6
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.2e-99 365.9 305 61.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 6.0e-98 361.7 308 61.0
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 7.9e-98 361.3 301 60.1
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.3e-97 359.8 297 64.3
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.9e-96 356.7 306 59.2
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 3.3e-96 355.9 310 60.0
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.1e-95 353.2 308 62.0
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 8.2e-95 351.3 306 60.5
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 5.3e-94 348.6 308 58.4
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 9.0e-94 347.8 299 60.2
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.5e-93 347.1 300 60.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.5e-93 347.1 306 58.2
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 4.5e-93 345.5 308 57.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.0e-92 344.4 308 57.8
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.0e-92 344.4 308 57.8
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.3e-92 344.0 305 58.7
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.7e-92 343.6 332 55.1
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.8e-92 342.4 306 59.2
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.8e-92 342.4 301 57.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.9e-91 340.1 306 56.2
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.2e-90 337.4 306 57.8
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.6e-90 337.0 306 58.8
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.5e-90 335.9 293 59.0
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 4.6e-90 335.5 306 55.6
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.3e-89 334.0 302 58.6
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.8e-89 333.6 307 58.6
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 6.7e-89 331.6 363 51.2
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.5e-88 330.5 305 57.4
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.5e-88 330.5 317 54.6
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.5e-88 330.5 305 54.4
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 4.3e-88 328.9 306 58.2
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 5.7e-88 328.6 304 58.2
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.3e-87 327.4 337 52.2
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.6e-87 327.0 314 54.5
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 2.8e-87 326.2 306 57.5
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 6.3e-87 325.1 314 57.0
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 8.2e-87 324.7 309 56.0
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 8.2e-87 324.7 314 53.8
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 1.1e-86 324.3 306 57.2
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 4.1e-86 322.4 306 55.6
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 5.3e-86 322.0 308 55.8
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.5e-85 320.5 313 54.0
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 2.6e-85 319.7 306 54.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 4.5e-85 318.9 306 55.9
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 7.7e-85 318.2 304 56.6
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 7.7e-85 318.2 306 56.2
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.0e-84 317.8 306 54.2
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.3e-84 317.4 308 55.8
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.3e-84 317.4 308 55.5
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.3e-84 317.4 304 56.6
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 3.8e-84 315.8 300 54.0
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.8e-84 315.8 300 54.0
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 3.8e-84 315.8 306 53.9
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 5.0e-84 315.5 305 55.4
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 5.0e-84 315.5 291 58.1
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 8.5e-84 314.7 315 53.7
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.4e-83 313.9 306 56.2
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.5e-83 313.2 307 54.7
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 2.5e-83 313.2 313 53.4
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 9.4e-83 311.2 306 53.6
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 2.1e-82 310.1 305 53.8
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 4.6e-82 308.9 306 55.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 4.6e-82 308.9 306 55.2
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.0e-81 307.8 308 52.6
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.4e-81 307.4 311 54.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 3.9e-81 305.8 304 54.9
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 3.9e-81 305.8 306 53.6
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 6.7e-81 305.1 302 54.3
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.0e-80 303.5 306 52.9
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 9.7e-80 301.2 306 54.6
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.3e-79 300.8 323 51.7
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 6.3e-79 298.5 306 53.6
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 8.2e-79 298.1 307 50.5
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 3.1e-78 296.2 304 52.0
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.1e-78 295.8 306 53.3
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 9.1e-78 294.7 307 52.4
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 4.5e-77 292.4 302 53.0
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.7e-74 283.1 293 51.5
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 2.4e-70 270.0 264 52.3
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 4.5e-69 265.8 306 50.3
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 4.5e-69 265.8 315 45.7
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 7.7e-69 265.0 315 45.7
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.2e-68 263.5 308 49.4
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 8.2e-63 245.0 207 63.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.1e-59 234.6 274 48.2
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 2.5e-59 233.4 306 49.0
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 4.2e-59 232.6 248 49.6
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 9.4e-59 231.5 307 43.3
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 9.8e-56 221.5 241 50.6
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 3.7e-55 219.5 190 65.8
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 8.3e-55 218.4 141 80.9
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 9.1e-54 214.9 141 79.4
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 7.7e-53 211.8 203 55.7
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.5e-51 207.6 209 53.6
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 5.2e-49 199.1 120 85.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-48 196.8 120 85.0
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 2.2e-47 193.7 144 71.5
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 9.5e-43 178.3 246 40.2
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 1.0e-41 174.9 169 55.6
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.9e-36 156.8 193 46.6
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 4.7e-34 149.4 105 71.4
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 3.4e-32 143.3 305 29.8
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.6e-29 134.4 217 38.7
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 3.1e-25 120.2 181 40.9
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 1.2e-24 118.2 118 49.2
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 3.4e-24 116.7 120 51.7
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.7e-23 113.2 294 28.9
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-22 111.3 91 70.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.6e-21 106.3 100 55.0
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 7.3e-19 99.0 258 32.2
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 9.5e-19 98.6 69 69.6
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 8.1e-18 95.5 67 70.1
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 6.0e-13 79.3 65 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 2.1e-10 70.9 123 36.6
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.8e-09 67.8 58 53.4


User provided reference genes

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