Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008813g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 1.7e-47 192.2 88 100.0
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.8e-12 75.9 41 85.4
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.8e-12 75.9 41 85.4
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.8e-12 75.9 41 85.4
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.1e-12 74.3 41 82.9
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 8.8e-12 73.6 41 82.9
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-11 73.2 41 82.9
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 1.1e-11 73.2 41 82.9
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 2.5e-11 72.0 55 65.5
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 4.3e-11 71.2 41 80.5
Peaxi162Scf00475g00112 Petunia axillaris HOM05D007952 ORTHO05D004271 7.4e-11 70.5 45 68.9
Nitab4.5_0006096g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 1.1e-09 66.6 34 88.2
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 4.1e-09 64.7 41 73.2
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 4.1e-09 64.7 31 93.5
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 4.1e-09 64.7 31 93.5
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 4.1e-09 64.7 31 93.5
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 4.1e-09 64.7 31 93.5
Peaxi162Scf00136g00086 Petunia axillaris HOM05D007952 ORTHO05D004271 6.9e-09 63.9 33 87.9
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 2.6e-08 62.0 40 70.0
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-08 61.6 31 87.1
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 4.5e-08 61.2 31 87.1
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 4.5e-08 61.2 31 87.1
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.7e-08 60.5 31 87.1
SEGI_28289 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 7.7e-08 60.5 39 71.8
Glyma.19G187300 Glycine max HOM05D007952 ORTHO05D004271 1.0e-07 60.1 31 87.1
Lsat_1_v5_gn_5_36201 Lactuca sativa HOM05D048309 ORTHO05D031508 1.7e-07 59.3 28 96.4
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.7e-07 59.3 28 96.4
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.9e-07 58.5 40 67.5
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.2e-06 55.1 48 58.3


User provided reference genes

Program Settings