Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.7e-275 951.4 508 100.0
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.1e-218 763.5 432 95.1
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.4e-194 682.6 501 77.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.5e-188 662.5 461 78.3
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 2.4e-186 656.0 462 76.6
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 4.2e-183 645.2 462 76.2
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 3.8e-115 419.5 472 52.8
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.1e-106 391.3 430 53.3
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 5.4e-106 389.0 458 51.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.6e-105 387.5 480 51.9
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 4.6e-105 386.0 531 46.1
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 4.0e-101 372.9 480 48.5
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 4.9e-99 365.9 485 46.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.2e-98 363.2 478 48.1
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.8e-96 357.5 459 50.8
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 5.3e-93 345.9 467 47.1
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 9.0e-93 345.1 460 50.4
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 4.9e-91 339.3 461 49.0
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 6.5e-91 339.0 398 50.3
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 9.3e-90 335.1 478 44.6
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.3e-88 330.5 519 42.6
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 3.9e-88 329.7 466 44.8
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.9e-88 329.7 439 46.9
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 3.9e-88 329.7 472 45.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 6.7e-88 328.9 497 45.3
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 1.1e-87 328.2 474 47.3
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.5e-87 327.8 369 52.8
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.5e-87 327.8 471 45.4
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.5e-87 327.8 564 40.2
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 3.3e-87 326.6 443 47.0
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.3e-87 326.2 443 46.5
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 6.9e-85 318.9 457 44.2
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 3.4e-84 316.6 457 43.8
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.4e-84 316.6 482 42.7
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.0e-83 315.1 471 45.9
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 3.2e-82 310.1 467 43.9
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 3.5e-81 306.6 492 42.1
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 5.7e-79 299.3 487 42.5
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.6e-78 297.7 464 43.3
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 2.2e-78 297.4 476 42.0
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.2e-78 297.4 470 42.3
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 4.1e-77 293.1 502 41.6
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 9.0e-77 292.0 473 41.9
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 5.9e-76 289.3 470 43.8
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.3e-75 288.1 473 42.5
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.7e-75 287.7 471 42.5
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.7e-75 287.7 472 42.2
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.9e-74 284.3 475 41.3
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.9e-74 284.3 474 42.2
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.2e-74 283.1 481 41.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 4.6e-73 279.6 479 40.5
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 2.0e-71 274.2 478 40.4
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.2e-70 270.8 459 39.2
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.4e-69 268.1 474 41.1
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.8e-69 267.7 487 40.0
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 3.1e-69 266.9 474 38.8
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.4e-68 263.5 462 39.4
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 3.4e-68 263.5 341 46.9
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.5e-68 263.1 463 39.5
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 5.9e-68 262.7 427 42.6
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.1e-66 258.5 387 40.6
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 5.5e-66 256.1 593 34.2
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.4e-64 251.5 379 44.6
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 4.4e-63 246.5 481 37.2
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 7.4e-63 245.7 469 38.4
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.7e-62 244.6 506 38.9
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 2.2e-62 244.2 409 42.1
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.0e-61 239.2 482 36.1
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.2e-58 230.3 362 41.7
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 5.2e-56 223.0 320 42.5
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 6.7e-56 222.6 490 35.5
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 9.7e-55 218.8 487 35.3
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.8e-54 217.2 465 37.2
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 6.3e-54 216.1 356 38.5
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.3e-51 208.4 304 42.4
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 2.9e-51 207.2 305 44.6
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.7e-49 199.9 279 43.7
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 3.4e-47 193.7 281 44.1
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.1e-45 188.7 180 57.8
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.4e-45 188.3 406 37.9
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 3.2e-42 177.2 274 40.9
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 4.0e-40 170.2 188 50.5
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 2.2e-38 164.5 570 29.6
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 2.2e-38 164.5 290 41.4
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 9.1e-37 159.1 443 33.9
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.6e-36 158.3 483 31.3
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 3.5e-36 157.1 280 38.6
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 5.6e-34 149.8 466 30.9
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 2.9e-27 127.5 175 44.6
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.0e-24 119.0 131 45.0
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 4.0e-24 117.1 188 43.1
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.0e-20 104.8 203 38.4
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 5.0e-19 100.1 117 48.7
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 6.6e-19 99.8 140 43.6
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 5.8e-15 86.7 371 26.1
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 2.9e-14 84.3 115 46.1
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 7.8e-12 76.3 192 32.3
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 1.7e-11 75.1 339 25.7
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 3.9e-11 73.9 79 46.8
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.3e-10 70.9 243 28.8
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 7.3e-10 69.7 217 27.2
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.6e-09 68.6 86 38.4
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 4.7e-09 67.0 212 28.3
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.7e-06 58.5 115 37.4


User provided reference genes

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