Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.3e-134 483.0 244 100.0
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.6e-127 459.5 244 94.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 2.1e-119 432.6 244 86.9
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 2.5e-117 425.6 244 86.9
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 4.7e-116 421.4 244 86.1
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.2e-113 412.5 244 84.8
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.9e-81 305.8 247 63.6
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.4e-78 297.0 247 62.3
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 3.0e-78 295.8 249 60.2
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 3.9e-78 295.4 246 60.2
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 5.1e-78 295.0 250 60.0
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.5e-77 293.5 254 60.2
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.3e-77 292.0 250 60.0
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 2.2e-76 289.7 257 58.4
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.3e-76 288.1 250 60.0
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.1e-75 287.3 261 58.2
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.1e-75 287.3 243 58.4
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 2.4e-75 286.2 229 62.9
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 6.9e-75 284.6 244 61.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 9.1e-75 284.3 227 64.3
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.0e-73 280.8 212 64.6
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.3e-73 280.4 249 57.8
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.7e-73 280.0 246 58.9
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 2.2e-73 279.6 249 58.6
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.2e-73 279.6 246 58.9
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-73 279.3 235 59.6
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 5.0e-73 278.5 244 57.8
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 8.5e-73 277.7 212 63.7
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 2.5e-72 276.2 251 57.8
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 2.5e-72 276.2 246 57.3
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 9.4e-72 274.2 250 59.2
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.1e-71 273.1 211 64.5
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 2.7e-71 272.7 236 59.3
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.7e-71 271.9 246 57.7
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 7.9e-71 271.2 236 58.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 7.9e-71 271.2 208 64.4
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.9e-71 271.2 254 57.1
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.4e-70 270.4 253 54.9
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.4e-70 270.4 246 56.9
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.8e-70 270.0 205 64.9
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 2.3e-70 269.6 258 56.2
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 3.0e-70 269.2 247 55.9
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 3.9e-70 268.9 186 68.8
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 3.9e-70 268.9 246 56.5
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 5.1e-70 268.5 232 59.1
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 6.7e-70 268.1 256 55.9
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 8.8e-70 267.7 216 62.5
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.5e-69 266.9 221 59.3
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.6e-69 266.2 212 60.4
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.7e-69 264.2 246 56.5
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 9.7e-69 264.2 247 56.3
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 1.3e-68 263.8 212 60.4
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 2.2e-68 263.1 246 56.1
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.2e-68 263.1 239 56.1
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 3.7e-68 262.3 211 62.1
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.7e-68 262.3 151 86.1
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 3.7e-68 262.3 235 57.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 6.3e-68 261.5 246 56.5
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 8.2e-68 261.2 223 58.7
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 8.2e-68 261.2 186 65.6
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 4.1e-67 258.8 172 72.1
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.1e-67 258.8 250 56.4
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 5.3e-67 258.5 244 54.5
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 5.3e-67 258.5 250 55.6
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 9.1e-67 257.7 210 62.4
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.6e-66 256.1 199 61.3
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 3.4e-66 255.8 229 56.3
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 5.9e-66 255.0 247 51.8
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 5.9e-66 255.0 244 53.3
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 5.9e-66 255.0 237 57.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 2.2e-65 253.1 185 64.3
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.8e-65 252.3 204 56.9
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 6.5e-65 251.5 197 60.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 5.5e-64 248.4 181 65.7
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 9.4e-64 247.7 181 65.7
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.6e-63 246.9 203 57.6
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 3.9e-62 242.3 243 54.3
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.1e-61 240.7 237 51.9
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.1e-59 234.2 236 50.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.6e-58 230.3 230 55.2
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 3.8e-57 225.7 234 52.6
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 5.0e-57 225.3 235 50.6
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.9e-56 223.4 230 51.3
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 3.2e-56 222.6 235 50.6
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 4.2e-56 222.2 241 49.8
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 4.2e-56 222.2 241 49.8
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 4.2e-56 222.2 241 49.8
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 9.4e-56 221.1 213 54.9
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 1.2e-55 220.7 241 49.8
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.1e-55 219.9 142 69.7
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 2.7e-55 219.5 238 49.6
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 8.0e-55 218.0 181 58.6
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.4e-54 217.2 177 56.5
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 2.3e-54 216.5 217 53.0
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 3.3e-53 212.6 144 68.8
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 7.5e-53 211.5 175 55.4
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.6e-50 203.8 208 46.2
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.1e-48 197.6 180 52.2
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.5e-48 197.2 202 52.0
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.2e-47 194.1 188 52.7
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 1.6e-47 193.7 160 61.2
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.7e-47 192.2 246 43.5
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.5e-45 187.2 212 49.1
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 1.8e-43 180.3 219 41.6
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 5.4e-43 178.7 179 49.2
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 5.0e-41 172.2 215 43.3
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.2e-31 141.0 87 74.7
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 2.1e-31 140.2 145 53.1
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-30 137.5 170 46.5
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 9.8e-29 131.3 213 35.7
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.6e-26 124.0 220 36.4
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 4.4e-21 105.9 83 59.0
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.3e-17 93.6 159 37.7
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.9e-16 90.5 204 32.4
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.5e-16 90.1 67 61.2
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-15 87.8 123 38.2
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 4.1e-11 72.8 73 47.9
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.9e-09 66.2 133 33.8
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 8.6e-09 65.1 73 41.1
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 5.2e-06 55.8 87 37.9


User provided reference genes

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