Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008761g0020 Nicotiana tabacum HOM05D003778 ORTHO05D004418 0.0e+00 1164.1 576 100.0
Nitab4.5_0001219g0170 Nicotiana tabacum HOM05D003778 ORTHO05D004418 0.0e+00 1127.1 566 96.5
Peaxi162Scf00833g00024 Petunia axillaris HOM05D003778 ORTHO05D004418 0.0e+00 1081.2 564 93.4
Solyc02g069490.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 5.9e-311 1070.1 565 90.6
Sopen02g018630 Solanum pennellii HOM05D003778 ORTHO05D004418 7.3e-309 1063.1 567 91.0
PGSC0003DMG400021142 Solanum tuberosum HOM05D003778 ORTHO05D004418 1.4e-307 1058.9 567 90.7
CAN.G675.20 Capsicum annuum HOM05D003778 ORTHO05D004418 6.9e-307 1056.6 567 91.2
CAN.G1362.14 Capsicum annuum HOM05D003778 ORTHO05D004418 2.8e-292 1008.1 564 84.8
Nitab4.5_0000265g0030 Nicotiana tabacum HOM05D003778 ORTHO05D004418 3.5e-287 991.1 566 83.6
CAN.G79.46 Capsicum annuum HOM05D003778 ORTHO05D004418 4.8e-284 980.7 564 82.6
Peaxi162Scf01123g00017 Petunia axillaris HOM05D003778 ORTHO05D004418 5.9e-282 973.8 567 79.9
vmacro00468 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 2.9e-281 971.5 572 80.8
CiPaw.06G057600 Carya illinoinensis HOM05D003778 ORTHO05D004418 3.8e-281 971.1 564 82.8
SGA_v2.0_scaffold223G42894 Striga asiatica HOM05D003778 ORTHO05D004418 3.2e-280 968.0 569 81.5
Haze_11725 Corylus avellana HOM05D003778 ORTHO05D004418 4.6e-279 964.1 564 81.0
Gohir.D13G024700 Gossypium hirsutum HOM05D003778 ORTHO05D004418 4.6e-279 964.1 563 81.3
Gorai.013G027900 Gossypium raimondii HOM05D003778 ORTHO05D004418 6.1e-279 963.8 563 81.3
PGR004G0624 Punica granatum HOM05D003778 ORTHO05D004418 6.1e-279 963.8 564 81.6
QL03p043582 Quercus lobata HOM05D003778 ORTHO05D004418 7.9e-279 963.4 564 81.2
Sabra08G0063000 Salix brachista HOM05D003778 ORTHO05D004418 2.3e-278 961.8 552 82.8
Potri.008G084800 Populus trichocarpa HOM05D003778 ORTHO05D004418 3.0e-278 961.4 552 83.0
Ciclev10030984m.g Citrus clementina HOM05D003778 ORTHO05D004418 3.9e-278 961.1 564 80.5
PGSC0003DMG400011801 Solanum tuberosum HOM05D003778 ORTHO05D004418 3.9e-278 961.1 552 81.2
Gohir.A13G026100 Gossypium hirsutum HOM05D003778 ORTHO05D004418 5.1e-278 960.7 563 80.8
CANSAT78G1874 Cannabis sativa HOM05D003778 ORTHO05D004418 6.7e-278 960.3 564 81.2
MD16G1000400 Malus domestica HOM05D003778 ORTHO05D004418 1.1e-277 959.5 564 80.5
MD13G1007700 Malus domestica HOM05D003778 ORTHO05D004418 1.5e-277 959.1 565 80.4
Sc06g0007850 Simmondsia chinensis HOM05D003778 ORTHO05D004418 1.5e-277 959.1 560 80.9
COL.COLO4_27669 Corchorus olitorius HOM05D003778 ORTHO05D004418 2.5e-277 958.4 563 81.0
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea HOM05D003778 ORTHO05D004418 3.3e-277 958.0 564 80.5
Potri.010G170000 Populus trichocarpa HOM05D003778 ORTHO05D004418 3.3e-277 958.0 552 83.0
Dinv17604 Davidia involucrata HOM05D003778 ORTHO05D004418 7.4e-277 956.8 564 80.7
Manes.03G081200 Manihot esculenta HOM05D003778 ORTHO05D004418 7.4e-277 956.8 552 82.2
Prupe.1G345300 Prunus persica HOM05D003778 ORTHO05D004418 9.7e-277 956.4 568 79.9
Sopen02g009490 Solanum pennellii HOM05D003778 ORTHO05D004418 9.7e-277 956.4 551 81.7
TWI77G0069 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 2.2e-276 955.3 564 80.5
Atru.chr11.1231 Acer truncatum HOM05D003778 ORTHO05D004418 6.3e-276 953.7 564 80.1
Atru.chr11.1319 Acer truncatum HOM05D003778 ORTHO05D004418 6.3e-276 953.7 564 80.1
Peaxi162Scf00695g00218 Petunia axillaris HOM05D003778 ORTHO05D004418 6.3e-276 953.7 565 81.9
Rhsim09G0073500 Rhododendron simsii HOM05D003778 ORTHO05D004418 6.3e-276 953.7 566 80.0
TWI74G0502 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 8.2e-276 953.4 564 80.7
Thecc.02G311500 Theobroma cacao HOM05D003778 ORTHO05D004418 2.4e-275 951.8 564 81.0
Eucgr.J00851 Eucalyptus grandis HOM05D003778 ORTHO05D004418 3.1e-275 951.4 564 80.1
Hund24279 Selenicereus undatus HOM05D003778 ORTHO05D004418 5.3e-275 950.7 550 81.1
Cc09_g06490 Coffea canephora HOM05D003778 ORTHO05D004418 6.9e-275 950.3 556 80.8
Rhsim09G0073400 Rhododendron simsii HOM05D003778 ORTHO05D004418 6.9e-275 950.3 566 79.9
TAR035G0003 Trochodendron aralioides HOM05D003778 ORTHO05D004418 1.2e-274 949.5 564 80.1
Sabra10G0129800 Salix brachista HOM05D003778 ORTHO05D004418 1.5e-274 949.1 552 82.6
TAR629G2113 Trochodendron aralioides HOM05D003778 ORTHO05D004418 3.4e-274 948.0 564 80.0
Duzib248G0532 Durio zibethinus HOM05D003778 ORTHO05D004418 4.5e-274 947.6 552 81.5
SalBow8G3862 Salvia bowleyana HOM05D003778 ORTHO05D004418 1.0e-273 946.4 563 79.8
Actinidia04080 Actinidia chinensis HOM05D003778 ORTHO05D004418 1.3e-273 946.0 564 79.1
VMungo1127G1615 Vigna mungo HOM05D003778 ORTHO05D004418 1.3e-273 946.0 566 79.0
MSTRG.16322 Avicennia marina HOM05D003778 ORTHO05D004418 2.2e-273 945.3 563 80.5
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea HOM05D003778 ORTHO05D004418 3.8e-273 944.5 564 79.8
Peaxi162Scf00312g00221 Petunia axillaris HOM05D003778 ORTHO05D004418 3.8e-273 944.5 565 81.9
Migut.M01947 Erythranthe guttata HOM05D003778 ORTHO05D004418 5.0e-273 944.1 564 80.1
SalBow2G0375 Salvia bowleyana HOM05D003778 ORTHO05D004418 5.0e-273 944.1 563 79.6
Glyma.11G103500 Glycine max HOM05D003778 ORTHO05D004418 1.4e-272 942.6 564 79.1
Solyc02g030170.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 4.2e-272 941.0 534 82.6
PSO017G4886 Papaver somniferum HOM05D003778 ORTHO05D004418 7.2e-272 940.3 563 80.1
PSO478G4461 Papaver somniferum HOM05D003778 ORTHO05D004418 7.2e-272 940.3 563 80.1
Ah.01g001630 Amaranthus hybridus HOM05D003778 ORTHO05D004418 1.2e-271 939.5 565 79.3
Lj3g0022719 Lotus japonicus HOM05D003778 ORTHO05D004418 1.2e-271 939.5 564 78.5
CSS0038233 Camellia sinensis var. sinensis HOM05D003778 ORTHO05D004418 3.6e-271 937.9 564 79.3
Lj6A722T93 Lonicera japonica HOM05D003778 ORTHO05D004418 3.6e-271 937.9 571 79.2
Lalb_Chr01g0001531 Lupinus albus HOM05D003778 ORTHO05D004418 6.1e-271 937.2 564 79.1
AUR62017664 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.0e-270 936.4 549 79.8
Phvul.011G031700 Phaseolus vulgaris HOM05D003778 ORTHO05D004418 1.4e-270 936.0 564 78.5
ClCG09G004610 Citrullus lanatus HOM05D003778 ORTHO05D004418 2.3e-270 935.3 552 79.5
AUR62015201 Chenopodium quinoa HOM05D003778 ORTHO05D004418 5.1e-270 934.1 549 79.6
Lalb_Chr03g0024881 Lupinus albus HOM05D003778 ORTHO05D004418 2.0e-269 932.2 564 79.3
DCAR_002565 Daucus carota HOM05D003778 ORTHO05D004418 5.7e-269 930.6 563 78.9
CDE05G2073 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 7.4e-269 930.2 550 79.8
MBI03_g24012_MAGBIO Magnolia biondii HOM05D003778 ORTHO05D004418 2.8e-268 928.3 564 78.4
DCAR_030405 Daucus carota HOM05D003778 ORTHO05D004418 4.8e-268 927.5 563 78.9
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 8.2e-268 926.8 574 78.4
THA.LOC104804923 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 1.1e-267 926.4 553 80.1
ATR0618G344 Amborella trichopoda HOM05D003778 ORTHO05D004418 2.4e-267 925.2 564 77.3
TPR.G21559 Trifolium pratense HOM05D003778 ORTHO05D004418 2.4e-267 925.2 564 77.5
SEGI_38803 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 2.6e-266 921.8 565 77.2
Aqoxy3G04278 Aquilegia oxysepala HOM05D003778 ORTHO05D004418 3.4e-266 921.4 564 77.8
AL3G33330 Arabidopsis lyrata HOM05D003778 ORTHO05D004418 4.5e-266 921.0 564 78.0
MELO3C023603.2 Cucumis melo HOM05D003778 ORTHO05D004418 7.7e-266 920.2 564 76.1
Psat7g174000 Pisum sativum HOM05D003778 ORTHO05D004418 1.0e-265 919.8 564 77.3
BcaC05g28402 Brassica carinata HOM05D003778 ORTHO05D004418 2.2e-265 918.7 564 78.2
A05p29300 Brassica napus HOM05D003778 ORTHO05D004418 2.2e-265 918.7 564 78.2
C05p44820 Brassica napus HOM05D003778 ORTHO05D004418 2.2e-265 918.7 564 78.2
RcHm_v2.0_Chr4g0446441 Rosa chinensis HOM05D003778 ORTHO05D004418 2.2e-265 918.7 568 78.0
FvH4_4g36730 Fragaria vesca HOM05D003778 ORTHO05D004418 2.9e-265 918.3 566 78.3
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 2.9e-265 918.3 566 78.3
BraA05t21813Z Brassica rapa HOM05D003778 ORTHO05D004418 5.0e-265 917.5 564 78.0
AT3G19820 Arabidopsis thaliana HOM05D003778 ORTHO05D004418 6.5e-265 917.1 564 77.7
Ca_03035_v3 Cicer arietinum L. HOM05D003778 ORTHO05D004418 6.5e-265 917.1 564 77.3
BolC5t33208H Brassica oleracea HOM05D003778 ORTHO05D004418 1.1e-264 916.4 564 78.0
BcaB06g26051 Brassica carinata HOM05D003778 ORTHO05D004418 1.4e-264 916.0 564 77.8
Sp3g17830 Schrenkiella parvula HOM05D003778 ORTHO05D004418 1.9e-264 915.6 564 77.5
A01p34930 Brassica napus HOM05D003778 ORTHO05D004418 3.2e-264 914.8 564 77.5
Medtr4g074350 Medicago truncatula HOM05D003778 ORTHO05D004418 3.2e-264 914.8 564 77.1
C01p44340 Brassica napus HOM05D003778 ORTHO05D004418 5.5e-264 914.1 564 77.3
BolC1t04399H Brassica oleracea HOM05D003778 ORTHO05D004418 5.5e-264 914.1 564 77.3
Thhalv10020412m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 7.2e-264 913.7 564 77.3
Carub.0003s1970 Capsella rubella HOM05D003778 ORTHO05D004418 9.4e-264 913.3 564 76.8
CARHR095330 Cardamine hirsuta HOM05D003778 ORTHO05D004418 1.2e-263 912.9 564 76.6
Sed0012416 Sechium edule HOM05D003778 ORTHO05D004418 1.6e-263 912.5 552 78.3
BraA01t03576Z Brassica rapa HOM05D003778 ORTHO05D004418 2.1e-263 912.1 564 77.1
HanXRQChr13g0388101 Helianthus annuus HOM05D003778 ORTHO05D004418 2.1e-263 912.1 571 76.9
Aa31LG8G6590 Aethionema arabicum HOM05D003778 ORTHO05D004418 6.1e-263 910.6 564 77.1
CsaV3_7G030530 Cucumis sativus L. HOM05D003778 ORTHO05D004418 8.0e-263 910.2 564 75.4
Zm00001eb228910 Zea mays HOM05D003778 ORTHO05D004418 1.4e-262 909.4 552 78.4
Os10g0397400 Oryza sativa ssp. japonica HOM05D003778 ORTHO05D004418 2.3e-262 908.7 552 78.1
Sp1g37100 Schrenkiella parvula HOM05D003778 ORTHO05D004418 2.3e-262 908.7 564 77.1
ECA233G5967 Erigeron canadensis HOM05D003778 ORTHO05D004418 2.6e-261 905.2 567 76.7
EL10Ac9g22920 Beta vulgaris HOM05D003778 ORTHO05D004418 4.4e-261 904.4 562 75.8
ECA234G2331 Erigeron canadensis HOM05D003778 ORTHO05D004418 1.3e-260 902.9 553 78.1
HanXRQChr01g0028571 Helianthus annuus HOM05D003778 ORTHO05D004418 2.8e-260 901.7 556 77.2
THA.LOC104815230 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 1.4e-259 899.4 564 75.5
Lj6g0014800 Lotus japonicus HOM05D003778 ORTHO05D004418 2.4e-259 898.7 564 76.2
A06p03260 Brassica napus HOM05D003778 ORTHO05D004418 3.1e-259 898.3 553 77.4
BraA06t23537Z Brassica rapa HOM05D003778 ORTHO05D004418 7.0e-259 897.1 553 77.2
CsaV3_4G009240 Cucumis sativus L. HOM05D003778 ORTHO05D004418 2.6e-258 895.2 564 75.2
ClCG07G016390 Citrullus lanatus HOM05D003778 ORTHO05D004418 1.0e-257 893.3 564 75.4
Lsat_1_v5_gn_4_26521 Lactuca sativa HOM05D003778 ORTHO05D004418 1.7e-257 892.5 553 77.0
BolC6t35641H Brassica oleracea HOM05D003778 ORTHO05D004418 2.9e-257 891.7 553 77.0
Lsat_1_v5_gn_8_32421 Lactuca sativa HOM05D003778 ORTHO05D004418 2.9e-257 891.7 567 75.7
Lj6g0026630 Lotus japonicus HOM05D003778 ORTHO05D004418 9.4e-256 886.7 568 74.3
Sed0007506 Sechium edule HOM05D003778 ORTHO05D004418 1.2e-255 886.3 552 75.2
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 6.7e-254 880.6 561 77.5
C06p05320 Brassica napus HOM05D003778 ORTHO05D004418 1.1e-243 846.7 524 76.5
SMO367G0245 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 1.1e-243 846.7 552 72.3
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis HOM05D003778 ORTHO05D004418 4.1e-243 844.7 550 72.0
BcaC08g43211 Brassica carinata HOM05D003778 ORTHO05D004418 7.2e-240 833.9 553 73.1
HanXRQChr15g0483641 Helianthus annuus HOM05D003778 ORTHO05D004418 2.3e-238 828.9 574 69.7
Mapoly0190s0010 Marchantia polymorpha HOM05D003778 ORTHO05D004418 3.0e-238 828.6 551 71.0
Pp3c7_650 Physcomitrium patens HOM05D003778 ORTHO05D004418 2.8e-236 822.0 566 69.4
Lsat_1_v5_gn_3_32901 Lactuca sativa HOM05D003778 ORTHO05D004418 1.4e-235 819.7 551 71.1
Pp3c11_26120 Physcomitrium patens HOM05D003778 ORTHO05D004418 1.2e-226 790.0 551 68.6
unitig_748.g7356 Utricularia gibba HOM05D003778 ORTHO05D004418 1.3e-225 786.6 552 71.0
MELO3C022613.2 Cucumis melo HOM05D003778 ORTHO05D004418 6.2e-223 777.7 469 77.2
AUR62018172 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.4e-205 718.4 425 79.3
Glyma.12G028300 Glycine max HOM05D003778 ORTHO05D004418 1.3e-204 716.8 418 81.3
GSVIVG01010184001 Vitis vinifera HOM05D003778 ORTHO05D004418 4.6e-186 655.2 567 59.3
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.1e-182 644.0 373 79.4
Oeu008711.1 Olea europaea HOM05D003778 ORTHO05D004418 7.6e-181 637.9 564 57.8
Mapoly0153s0024 Marchantia polymorpha HOM05D003778 ORTHO05D004418 1.6e-175 620.2 555 54.1
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis HOM05D003778 ORTHO05D004418 3.2e-163 579.3 488 53.9
vmacro10903 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 8.2e-159 564.7 417 67.9
CDE05G2099 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 5.9e-157 558.5 318 79.6
SEGI_20352 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 7.7e-157 558.1 520 50.6
SMO347G0448 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 5.5e-147 525.4 418 57.2
Nn4g24924 Nelumbo nucifera HOM05D003778 ORTHO05D004418 7.7e-141 505.0 292 77.4
Nitab4.5_0012697g0010 Nicotiana tabacum HOM05D003778 ORTHO05D004418 4.1e-134 482.6 566 49.6
Zm00001eb190720 Zea mays HOM05D003778 ORTHO05D004418 5.3e-134 482.3 304 75.7
Nitab4.5_0000876g0110 Nicotiana tabacum HOM05D003778 ORTHO05D004418 5.9e-133 478.8 564 48.8
CDE05G1908 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 7.8e-117 425.2 457 52.5
CBR_g45591 Chara braunii HOM05D003778 ORTHO05D004418 3.3e-83 313.5 492 37.0
Thhalv10012112m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 3.3e-75 287.0 213 65.3
C06p05360 Brassica napus HOM05D003778 ORTHO05D004418 2.6e-72 277.3 549 35.5
BcaB04g19062 Brassica carinata HOM05D003778 ORTHO05D004418 1.1e-57 228.8 166 64.5
BcaC08g43207 Brassica carinata HOM05D003778 ORTHO05D004418 2.0e-56 224.6 136 75.0
BolC6t35639H Brassica oleracea HOM05D003778 ORTHO05D004418 3.8e-55 220.3 136 73.5
vmacro10902 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 1.4e-44 185.3 119 73.9
GSVIVG01028580001 Vitis vinifera HOM05D003778 ORTHO05D004418 1.8e-44 184.9 133 71.4
Zm00001eb190730 Zea mays HOM05D003778 ORTHO05D004418 2.2e-42 177.9 117 67.5
GSVIVG01002973001 Vitis vinifera HOM05D003778 ORTHO05D004418 4.8e-42 176.8 128 70.3
C03p50700 Brassica napus HOM05D003778 ORTHO05D004418 5.3e-41 173.3 166 58.4
C03p50680 Brassica napus HOM05D003778 ORTHO05D004418 2.0e-40 171.4 166 58.4
BolC3t17357H Brassica oleracea HOM05D003778 ORTHO05D004418 3.4e-40 170.6 166 58.4
Cfa024211 Carpinus fangiana HOM05D003778 ORTHO05D004418 4.5e-40 170.2 319 33.2
BolC3t17355H Brassica oleracea HOM05D003778 ORTHO05D004418 3.8e-39 167.2 166 57.8
Cfa023151 Carpinus fangiana HOM05D003778 ORTHO05D004418 1.7e-31 141.7 495 26.7
Gorai.005G150900 Gossypium raimondii HOM05D003778 ORTHO05D004418 6.7e-28 129.8 97 61.9
A03p41410 Brassica napus HOM05D003778 ORTHO05D004418 1.1e-27 129.0 213 39.0
PGSC0003DMG400004305 Solanum tuberosum HOM05D003778 ORTHO05D004418 7.5e-27 126.3 90 66.7
HanXRQChr08g0230901 Helianthus annuus HOM05D003778 ORTHO05D004418 2.8e-26 124.4 75 72.0
GSVIVG01033182001 Vitis vinifera HOM05D003778 ORTHO05D008307 1.8e-25 121.7 67 76.1
BcaC01g03602 Brassica carinata HOM05D003778 ORTHO05D004418 4.0e-20 104.0 184 38.0
A03p41420 Brassica napus HOM05D003778 ORTHO05D004418 1.4e-17 95.5 166 39.8
C06p05290 Brassica napus HOM05D003778 ORTHO05D033430 7.7e-16 89.7 53 69.8
BraA03t13295Z Brassica rapa HOM05D003778 ORTHO05D004418 8.8e-12 76.3 46 67.4


User provided reference genes

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