Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.3e-104 380.2 187 100.0
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.1e-79 297.7 196 80.1
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.7e-52 209.9 210 57.1
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.4e-46 190.3 227 51.1
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.6e-41 171.4 229 47.2
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.9e-32 143.3 179 49.7
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.6e-31 139.0 196 43.9
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.0e-31 137.9 195 45.1
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 8.0e-31 137.9 196 43.9
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.8e-30 136.7 189 46.0
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 3.1e-30 136.0 205 42.0
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 4.0e-30 135.6 190 43.2
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 6.8e-30 134.8 190 43.2
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.9e-30 134.4 190 42.6
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 1.2e-29 134.0 200 39.5
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.6e-29 132.9 209 42.1
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 2.9e-28 129.4 181 43.1
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 3.7e-28 129.0 197 41.6
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 8.3e-28 127.9 200 42.0
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 1.4e-27 127.1 176 46.0
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 5.4e-27 125.2 198 41.4
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 6.0e-26 121.7 171 44.4
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 7.8e-26 121.3 186 41.9
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 7.8e-26 121.3 204 40.7
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.0e-25 120.9 174 43.1
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.0e-25 120.9 192 43.2
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.3e-25 120.6 193 44.0
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 2.3e-25 119.8 186 41.9
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.3e-25 119.8 184 40.8
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 2.3e-25 119.8 191 39.3
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.0e-25 119.4 179 41.9
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 3.9e-25 119.0 176 38.6
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.9e-25 119.0 184 40.8
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 8.6e-25 117.9 168 41.7
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.1e-24 117.5 184 41.8
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.9e-24 116.7 166 46.4
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.9e-24 116.7 188 41.0
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.9e-24 116.7 195 41.0
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.5e-24 116.3 187 41.2
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 2.5e-24 116.3 180 40.0
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 4.3e-24 115.5 183 39.3
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 5.6e-24 115.2 183 44.3
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 5.6e-24 115.2 183 44.3
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 5.6e-24 115.2 181 38.1
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 7.3e-24 114.8 183 40.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 9.5e-24 114.4 204 39.2
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.2e-23 114.0 173 41.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.2e-23 114.0 203 40.9
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.2e-23 114.0 175 42.9
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 1.2e-23 114.0 193 40.4
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.6e-23 113.6 183 43.7
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.6e-23 113.6 183 39.3
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.6e-23 113.6 183 43.7
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.6e-23 113.6 183 39.3
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.6e-23 113.6 170 39.4
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.1e-23 113.2 187 39.6
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 2.1e-23 113.2 188 39.9
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 2.1e-23 113.2 183 45.4
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.8e-23 112.8 206 40.3
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 2.8e-23 112.8 194 39.2
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 3.6e-23 112.5 186 41.4
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 3.6e-23 112.5 186 41.4
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 3.6e-23 112.5 169 41.4
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.7e-23 112.1 207 40.6
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 6.2e-23 111.7 213 39.0
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 6.2e-23 111.7 202 41.1
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.1e-23 111.3 190 43.7
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.4e-22 110.5 186 39.2
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.3e-22 109.8 182 37.9
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.3e-22 109.8 184 40.8
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 3.1e-22 109.4 211 37.9
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.1e-22 109.4 178 40.4
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 4.0e-22 109.0 183 42.1
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 4.0e-22 109.0 182 42.3
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 4.0e-22 109.0 191 40.3
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 6.8e-22 108.2 172 39.5
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 8.9e-22 107.8 187 40.1
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 8.9e-22 107.8 190 40.0
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.9e-22 107.8 196 37.8
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 1.5e-21 107.1 179 40.2
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.5e-21 107.1 172 46.5
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 2.0e-21 106.7 185 35.7
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.0e-21 106.7 183 36.1
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 5.8e-21 105.1 187 40.6
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.3e-20 104.0 199 38.7
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.3e-20 104.0 199 38.7
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.9e-20 102.8 188 37.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.7e-20 102.4 179 39.1
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 4.9e-20 102.1 163 39.3
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 6.4e-20 101.7 175 36.0
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 6.4e-20 101.7 188 36.2
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 8.3e-20 101.3 200 38.0
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 1.4e-19 100.5 163 41.7
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.9e-19 100.1 181 40.9
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.9e-19 100.1 188 35.1
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.9e-19 100.1 197 36.0
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 2.4e-19 99.8 190 35.8
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 3.2e-19 99.4 188 39.4
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 5.4e-19 98.6 201 37.3
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 5.4e-19 98.6 174 40.2
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 2.1e-18 96.7 192 38.5
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 2.7e-18 96.3 188 35.6
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 6.0e-18 95.1 172 36.0
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.0e-17 94.4 178 39.9
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 2.3e-17 93.2 202 35.6
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 3.9e-17 92.4 194 34.5
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 8.6e-17 91.3 167 37.7
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.1e-16 90.9 183 35.0
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.9e-16 90.1 216 30.6
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.3e-16 89.4 175 35.4
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 9.5e-16 87.8 208 30.3
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.6e-15 85.9 172 34.9
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 6.2e-15 85.1 196 37.2
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.6e-13 79.7 185 36.2
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.2e-12 76.6 186 32.3
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.9e-12 76.3 175 37.7
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.4e-11 73.9 170 35.9
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.4e-11 73.2 205 30.7
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 5.4e-11 72.0 82 51.2
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 7.1e-11 71.6 169 34.3
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 1.6e-10 70.5 188 32.4
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 1.0e-09 67.8 174 32.2
Solyc07g042400.2 Solanum lycopersicum HOM05D000392 ORTHO05D007128 1.0e-09 67.8 106 48.1
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 2.3e-09 66.6 51 62.7
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.5e-08 63.9 111 43.2
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.1e-07 60.1 96 43.8
DCAR_011924 Daucus carota HOM05D005897 ORTHO05D007128 2.4e-06 56.6 177 32.2
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 8.9e-06 54.7 201 28.4


User provided reference genes

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