Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.5e-95 352.8 177 100.0
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.2e-92 343.2 177 97.2
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.2e-73 280.0 171 83.0
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 3.2e-69 265.4 171 79.5
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 6.0e-68 261.2 171 78.9
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.3e-67 260.0 171 78.4
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 8.0e-65 250.8 171 77.2
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 8.6e-59 230.7 171 71.3
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 7.6e-55 217.6 171 67.8
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 9.6e-50 200.7 174 63.2
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 6.6e-43 177.9 170 58.2
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 3.3e-42 175.6 175 57.1
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-41 173.3 179 57.0
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 1.6e-41 173.3 179 57.0
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 3.6e-41 172.2 185 53.0
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 3.4e-39 165.6 171 55.6
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 2.9e-38 162.5 169 56.8
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.4e-37 160.2 157 56.1
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.4e-37 160.2 215 45.1
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 1.2e-36 157.1 170 54.7
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 2.1e-36 156.4 175 54.9
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 7.9e-36 154.5 171 53.8
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 1.3e-33 147.1 153 56.9
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 3.6e-33 145.6 157 52.2
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 8.1e-33 144.4 165 53.3
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 4.0e-32 142.1 167 51.5
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 1.7e-30 136.7 175 49.7
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 2.9e-30 136.0 152 53.3
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 1.9e-29 133.3 170 49.4
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 2.4e-29 132.9 161 51.6
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 4.2e-29 132.1 169 49.7
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 7.1e-29 131.3 175 45.1
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 9.3e-29 131.0 170 48.2
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 9.3e-29 131.0 170 48.2
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.6e-28 130.2 172 49.4
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.6e-28 130.2 170 48.2
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 2.1e-28 129.8 152 51.3
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 6.0e-28 128.3 164 50.0
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 7.9e-28 127.9 179 47.5
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 6.7e-27 124.8 174 48.9
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 4.3e-26 122.1 168 47.6
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 4.3e-26 122.1 158 48.7
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 7.4e-26 121.3 210 43.3
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 9.6e-26 120.9 174 46.0
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 1.3e-25 120.6 163 47.9
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 1.3e-25 120.6 142 50.7
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 1.6e-25 120.2 157 49.7
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.8e-25 119.4 163 47.2
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 2.8e-25 119.4 159 50.3
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 3.7e-25 119.0 164 47.0
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 3.7e-25 119.0 173 46.2
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 4.8e-25 118.6 185 43.8
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 4.8e-25 118.6 171 45.6
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 4.8e-25 118.6 222 40.5
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 6.2e-25 118.2 156 49.4
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 6.2e-25 118.2 158 48.1
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 6.2e-25 118.2 175 44.6
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 8.1e-25 117.9 175 44.6
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.1e-24 117.5 163 46.6
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 1.1e-24 117.5 160 46.2
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 1.4e-24 117.1 165 47.3
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.4e-24 117.1 157 47.8
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 2.4e-24 116.3 108 58.3
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 3.1e-24 115.9 159 47.2
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.1e-24 115.9 176 43.2
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 4.0e-24 115.5 166 46.4
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 4.0e-24 115.5 162 48.1
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 2.0e-23 113.2 173 44.5
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 2.0e-23 113.2 157 42.7
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 3.4e-23 112.5 105 62.9
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 4.5e-23 112.1 98 65.3
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 2.9e-22 109.4 157 42.0
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.5e-22 108.2 74 70.3
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 1.9e-21 106.7 107 55.1
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 4.2e-21 105.5 159 45.9
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 7.1e-21 104.8 153 45.1
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 1.2e-20 104.0 217 38.2
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 2.1e-20 103.2 134 47.8
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.6e-20 102.1 165 40.6
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 4.6e-20 102.1 130 49.2
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 6.0e-20 101.7 173 40.5
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 7.9e-20 101.3 172 40.7
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 7.9e-20 101.3 153 47.1
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 1.0e-19 100.9 153 46.4
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 3.9e-19 99.0 159 44.0
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 5.1e-19 98.6 172 43.6
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.1e-18 97.4 157 44.6
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 3.3e-18 95.9 140 42.9
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.6e-17 93.6 150 41.3
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 3.7e-17 92.4 153 41.8
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 8.2e-17 91.3 140 45.0
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 4.1e-16 89.0 201 35.3
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 5.3e-16 88.6 133 41.4
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 1.2e-15 87.4 133 39.8
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 2.6e-15 86.3 161 37.9
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 3.4e-15 85.9 143 42.0
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 5.8e-15 85.1 123 41.5
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 1.1e-13 80.9 154 38.3
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.4e-13 80.5 97 46.4
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 1.9e-13 80.1 155 35.5
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 2.5e-13 79.7 161 34.8
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 5.5e-13 78.6 89 55.1
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 1.2e-12 77.4 139 40.3
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.2e-12 77.4 152 36.8
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.6e-12 77.0 129 42.6
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 5.1e-11 72.0 155 35.5
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 5.1e-11 72.0 155 35.5
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 5.1e-11 72.0 129 38.0
Solyc09g018900.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 5.1e-11 72.0 44 77.3
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 6.7e-11 71.6 103 39.8
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 4.3e-10 68.9 149 36.2
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.2e-09 66.6 153 30.1
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 4.8e-09 65.5 82 46.3
Thhalv10005690m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 1.0e-06 57.8 80 46.2
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 3.8e-06 55.8 82 40.2
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 5.0e-06 55.5 104 37.5


User provided reference genes

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