Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 2.5e-112 409.1 246 100.0
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.4e-99 366.7 255 91.0
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 1.7e-44 183.7 206 67.5
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 4.1e-43 179.1 254 61.0
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 1.2e-39 167.5 195 59.0
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 7.1e-27 125.2 255 41.6
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.0e-25 121.3 248 41.5
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 1.1e-24 117.9 257 37.7
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 2.4e-19 100.1 209 39.2
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.3e-17 94.4 222 36.0
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 5.1e-17 92.4 222 35.6
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 1.5e-16 90.9 216 35.6
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 3.1e-14 83.2 183 33.9
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 9.0e-14 81.6 173 35.3
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 1.5e-13 80.9 183 32.8
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 9.9e-13 78.2 184 39.1
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 1.7e-12 77.4 200 41.0
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 2.2e-12 77.0 206 32.5
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 3.8e-12 76.3 227 30.4
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 4.9e-12 75.9 185 31.9
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 4.9e-12 75.9 195 33.3
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 1.1e-11 74.7 208 32.7
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.6e-10 70.9 189 33.3
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 2.7e-10 70.1 181 33.7
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.5e-10 69.7 181 33.7
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 4.6e-10 69.3 205 30.2
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 4.6e-10 69.3 189 31.7
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 7.9e-10 68.6 186 32.8
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 7.9e-10 68.6 183 32.2
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 1.8e-09 67.4 213 31.5
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.8e-09 67.4 181 33.7
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 2.3e-09 67.0 182 35.2
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 3.0e-09 66.6 189 29.6
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.7e-09 65.1 250 29.6
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 1.1e-08 64.7 175 32.6
DCAR_005774 Daucus carota HOM05D007468 ORTHO05D009051 1.5e-08 64.3 163 34.4
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 1.5e-08 64.3 196 33.2
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 1.9e-08 63.9 173 31.2
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 1.9e-08 63.9 185 30.8
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 2.5e-08 63.5 201 29.9
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 2.5e-08 63.5 188 29.3
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 3.3e-08 63.2 210 30.5
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 4.3e-08 62.8 229 28.8
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 7.4e-08 62.0 179 32.4
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 9.6e-08 61.6 179 32.4
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 1.6e-07 60.8 198 31.8
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 2.1e-07 60.5 192 28.6
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 2.8e-07 60.1 239 28.5
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 2.8e-07 60.1 223 25.1
Actinidia21419 Actinidia chinensis HOM05D007468 ORTHO05D009051 3.7e-07 59.7 130 38.5
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 6.2e-07 58.9 185 29.7
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 8.1e-07 58.5 227 29.1
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 8.1e-07 58.5 207 29.0
Migut.D00103 Erythranthe guttata HOM05D007468 ORTHO05D009051 1.1e-06 58.2 210 37.6
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 1.1e-06 58.2 231 26.0
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.4e-06 57.8 234 30.8
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 2.4e-06 57.0 180 30.0
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 2.4e-06 57.0 205 26.8
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 3.1e-06 56.6 222 27.0
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 5.3e-06 55.8 199 28.1
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 5.3e-06 55.8 208 32.2
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 6.9e-06 55.5 170 33.5
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 6.9e-06 55.5 217 28.1
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 6.9e-06 55.5 215 31.2


User provided reference genes

Program Settings