Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008734g0030 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.9e-60 235.0 114 100.0
Nitab4.5_0000016g0530 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.3e-44 182.2 97 91.8
Nitab4.5_0000016g0580 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.5e-43 178.7 98 88.8
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.3e-43 178.3 97 88.7
Nitab4.5_0000016g0550 Nicotiana tabacum HOM05D010426 ORTHO05D003796 9.5e-43 176.8 97 86.6
Nitab4.5_0000016g0610 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.8e-42 175.3 97 87.6
Nitab4.5_0007033g0050 Nicotiana tabacum HOM05D010426 ORTHO05D003796 8.1e-42 173.7 97 85.6
Nitab4.5_0000016g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.4e-41 172.9 97 85.6
Nitab4.5_0010629g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.8e-41 172.6 97 85.6
Nitab4.5_0007033g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.3e-41 172.2 97 85.6
Nitab4.5_0027357g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 5.8e-40 167.5 97 86.6
Nitab4.5_0008515g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.3e-39 166.4 97 84.5
Nitab4.5_0000293g0080 Nicotiana tabacum HOM05D010426 ORTHO05D003796 4.6e-37 157.9 97 81.4
Nitab4.5_0002112g0020 Nicotiana tabacum HOM05D010426 ORTHO05D003796 5.4e-30 134.4 80 81.2
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 1.5e-27 126.3 98 67.3
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 3.3e-27 125.2 98 66.3
Nitab4.5_0000016g0540 Nicotiana tabacum HOM05D010426 ORTHO05D003796 4.4e-24 114.8 64 84.4
Peaxi162Scf00027g00162 Petunia axillaris HOM05D010426 ORTHO05D003796 1.3e-23 113.2 98 62.2
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.3e-19 98.6 60 80.0
Nitab4.5_0001366g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.3e-11 71.6 85 42.4
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.3e-11 71.6 92 40.2
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 5.6e-11 71.2 92 42.4
Nitab4.5_0013311g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.3e-10 70.1 85 42.4
Nitab4.5_0002878g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.1e-10 69.3 93 37.6
PGSC0003DMG400040167 Solanum tuberosum HOM05D007636 ORTHO05D017739 1.1e-09 67.0 117 37.6
CAN.G2048.1 Capsicum annuum HOM05D008050 ORTHO05D003796 1.8e-09 66.2 107 37.4
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 2.4e-09 65.9 81 42.0
CAN.G135.83 Capsicum annuum HOM05D008050 ORTHO05D003796 3.1e-09 65.5 107 37.4
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 3.1e-09 65.5 81 44.4
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 3.1e-09 65.5 81 44.4
Sopen03g015050 Solanum pennellii HOM05D008050 ORTHO05D003796 3.1e-09 65.5 82 43.9
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 4.0e-09 65.1 99 38.4
Nitab4.5_0006831g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.0e-09 65.1 75 42.7
Solyc03g062750.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 4.0e-09 65.1 82 42.7
Actinidia11053 Actinidia chinensis HOM05D013685 ORTHO05D000952 6.9e-09 64.3 106 40.6
Actinidia11056 Actinidia chinensis HOM05D013685 ORTHO05D000952 6.9e-09 64.3 106 40.6
CAN.G894.4 Capsicum annuum HOM05D008050 ORTHO05D003796 9.0e-09 63.9 107 36.4
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.2e-08 63.5 95 36.8
Solyc03g114260.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.2e-08 63.5 81 42.0
PGSC0003DMG400039478 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.2e-08 63.5 81 43.2
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-08 63.2 94 37.2
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-08 63.2 94 37.2
Peaxi162Scf01007g00110 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-08 63.2 94 37.2
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 1.5e-08 63.2 94 37.2
Nitab4.5_0022592g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.6e-08 62.4 95 35.8
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 2.6e-08 62.4 94 39.4
Solyc07g062240.1 Solanum lycopersicum HOM05D007636 ORTHO05D000952 2.6e-08 62.4 92 38.0
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.4e-08 62.0 98 34.7
PGSC0003DMG400037921 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.4e-08 62.0 81 42.0
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.5e-08 61.6 94 35.1
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.5e-08 61.6 95 41.1
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.5e-08 61.6 94 35.1
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.5e-08 61.6 99 39.4
Actinidia11057 Actinidia chinensis HOM05D013685 ORTHO05D000952 5.8e-08 61.2 107 39.3
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 5.8e-08 61.2 89 36.0
CAN.G1424.7 Capsicum annuum HOM05D008050 ORTHO05D003796 7.6e-08 60.8 81 39.5
Nitab4.5_0007033g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 9.9e-08 60.5 100 38.0
Nitab4.5_0002608g0030 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.3e-07 60.1 94 35.1
Peaxi162Scf00269g00151 Petunia axillaris HOM05D007636 ORTHO05D003796 1.3e-07 60.1 105 35.2
Solyc03g059300.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.3e-07 60.1 81 40.7
PGSC0003DMG400036166 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.2e-07 59.3 91 36.3
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.9e-07 58.9 91 41.8
Actinidia11054 Actinidia chinensis HOM05D013685 ORTHO05D000952 3.8e-07 58.5 89 42.7
CAN.G375.39 Capsicum annuum HOM05D007636 ORTHO05D003796 3.8e-07 58.5 92 33.7
Actinidia11062 Actinidia chinensis HOM05D013685 ORTHO05D000952 4.9e-07 58.2 89 41.6
CAN.G853.5 Capsicum annuum HOM05D008050 ORTHO05D003796 8.4e-07 57.4 86 39.5
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.4e-07 57.4 87 42.5
Actinidia34725 Actinidia chinensis HOM05D040213 ORTHO05D000952 1.1e-06 57.0 77 44.2
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 1.1e-06 57.0 105 32.4
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 1.1e-06 57.0 105 32.4
SGA_v2.0_scaffold25G10851 Striga asiatica HOM05D007636 ORTHO05D003796 1.1e-06 57.0 100 36.0
SGA_v2.0_scaffold25G10881 Striga asiatica HOM05D007636 ORTHO05D003796 1.1e-06 57.0 100 36.0
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 1.4e-06 56.6 88 34.1
CAN.G853.22 Capsicum annuum HOM05D008050 ORTHO05D003796 1.4e-06 56.6 86 39.5
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 1.4e-06 56.6 91 41.8
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 1.9e-06 56.2 115 35.7
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 2.4e-06 55.8 99 35.4
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.4e-06 55.8 88 34.1
PGSC0003DMG400031147 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.4e-06 55.8 101 34.7
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 3.2e-06 55.5 115 35.7
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 4.2e-06 55.1 105 31.4
PGSC0003DMG400031146 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.5e-06 54.7 95 36.8
Peaxi162Scf00106g00206 Petunia axillaris HOM05D008050 ORTHO05D003796 7.1e-06 54.3 99 33.3


User provided reference genes

Program Settings