Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008732g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.1e-131 473.4 257 100.0
Nitab4.5_0001997g0080 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.6e-37 159.1 222 46.4
Nitab4.5_0010982g0010 Nicotiana tabacum HOM05D000143 ORTHO05D009077 1.1e-35 154.5 135 67.4
Nitab4.5_0001820g0160 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.0e-31 141.4 126 65.9
Sopen06g018510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-30 136.7 124 63.7
Sopen01g023390 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-25 120.6 110 65.5
Nitab4.5_0009620g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.1e-25 119.4 102 63.7
Sopen01g018000 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-25 118.2 119 58.0
Nitab4.5_0008824g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.9e-24 115.5 161 49.1
Ah.06g185680 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-22 111.3 117 53.8
Nitab4.5_0000363g0230 Nicotiana tabacum HOM05D000041 ORTHO05D000061 1.0e-20 104.8 114 57.9
Nitab4.5_0009170g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.0e-20 104.8 217 36.9
Ah.16g104740 Amaranthus hybridus HOM05D007353 ORTHO05D009077 1.8e-20 104.0 196 33.2
Nitab4.5_0000016g0510 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.3e-20 103.6 78 71.8
MELO3C030545.2 Cucumis melo HOM05D000002 ORTHO05D009077 5.1e-20 102.4 96 56.2
Nitab4.5_0004515g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-19 100.1 166 39.2
Nitab4.5_0001551g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.3e-19 99.8 167 40.7
Nitab4.5_0006335g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-17 94.0 163 45.4
ClCG09G015080 Citrullus lanatus HOM05D007353 ORTHO05D009077 5.3e-17 92.4 166 39.8
Nitab4.5_0000607g0140 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.5e-16 90.9 108 52.8
Nitab4.5_0000523g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.9e-14 84.0 95 55.8
MELO3C025626.2 Cucumis melo HOM05D000109 ORTHO05D000965 4.2e-14 82.8 187 31.6
Nitab4.5_0007634g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.5e-14 82.4 147 37.4
Nitab4.5_0007409g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.4e-14 81.6 144 38.2
ClCG03G011030 Citrullus lanatus HOM05D007353 ORTHO05D009077 6.1e-13 79.0 184 35.3
Nitab4.5_0000090g0350 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-12 77.4 44 81.8
Nitab4.5_0003133g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.2e-12 75.9 145 36.6
AUR62019448 Chenopodium quinoa HOM05D007645 ORTHO05D009183 8.8e-12 75.1 75 53.3
Nitab4.5_0009278g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.8e-12 75.1 105 44.8
Nitab4.5_0000085g0280 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-11 73.9 103 50.5
Nitab4.5_0000527g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-11 73.9 62 66.1
Nitab4.5_0003671g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-11 73.9 35 97.1
Nitab4.5_0001357g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.7e-11 72.4 35 94.3
Nitab4.5_0004337g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.7e-11 72.4 35 94.3
Nitab4.5_0000773g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.7e-11 71.6 103 48.5
Nitab4.5_0005201g0030 Nicotiana tabacum HOM05D002477 ORTHO05D001927 9.7e-11 71.6 35 94.3
Nitab4.5_0000457g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.3e-10 71.2 35 94.3
Nitab4.5_0001438g0150 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.3e-10 71.2 35 91.4
Nitab4.5_0001212g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.2e-10 70.5 35 91.4
Nitab4.5_0004338g0150 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.2e-10 70.5 35 91.4
Nitab4.5_0000103g0230 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.7e-10 69.7 35 88.6
Nitab4.5_0001873g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.7e-10 69.7 35 91.4
Nitab4.5_0004199g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.7e-10 69.7 35 91.4
Nitab4.5_0001444g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.8e-10 69.3 35 88.6
Nitab4.5_0002040g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.2e-10 68.6 35 91.4
Nitab4.5_0002464g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.2e-10 68.6 138 36.2
Nitab4.5_0000007g0160 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-09 67.4 35 88.6
Nitab4.5_0002402g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-09 67.4 35 85.7
Nitab4.5_0002450g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.8e-09 67.4 35 88.6
Nitab4.5_0002297g0130 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.4e-09 67.0 35 91.4
Nitab4.5_0000537g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.1e-09 66.6 35 88.6
Nitab4.5_0000348g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.1e-09 66.2 35 88.6
Nitab4.5_0000787g0250 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.1e-09 66.2 35 88.6
Nitab4.5_0004577g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 7.0e-09 65.5 35 88.6
Nitab4.5_0013583g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.1e-09 65.1 35 82.9
Nitab4.5_0002464g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-08 63.9 35 85.7
Nitab4.5_0002759g0130 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-08 63.9 167 35.9
Nitab4.5_0003202g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-08 63.9 35 85.7
Nitab4.5_0007144g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-08 63.9 35 85.7
Nitab4.5_0000023g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-08 63.5 35 85.7
Nitab4.5_0003019g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-08 63.5 35 82.9
Nitab4.5_0003086g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-08 63.5 33 87.9
Nitab4.5_0014586g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-08 63.5 35 85.7
Nitab4.5_0008157g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.5e-08 63.2 41 82.9
FvH4_3g12191 Fragaria vesca HOM05D000002 ORTHO05D000001 5.9e-08 62.4 120 30.0
Nitab4.5_0000344g0140 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.9e-08 62.4 58 53.4
TAR301G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.7e-08 62.0 142 27.5
Nitab4.5_0001611g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.3e-07 61.2 166 34.9
Nitab4.5_0000032g0230 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.7e-07 60.8 35 80.0
Nitab4.5_0003995g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.7e-07 60.8 35 80.0
Nitab4.5_0000343g0270 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.2e-07 60.5 160 33.8
Ciclev10027114m.g Citrus clementina HOM05D013916 ORTHO05D000001 3.8e-07 59.7 167 27.5
Nitab4.5_0001543g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.8e-07 59.7 35 80.0
Nitab4.5_0011984g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.8e-07 59.7 35 80.0
PGR102G2395 Punica granatum HOM05D000002 ORTHO05D000001 5.0e-07 59.3 235 25.1
COL.COLO4_29421 Corchorus olitorius HOM05D009616 ORTHO05D012857 6.5e-07 58.9 205 24.9
ECA233G5736 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-07 58.9 163 27.0
ECA238G0832 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 57.8 84 35.7
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 1.5e-06 57.8 115 30.4
ECA247G1739 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 57.8 115 30.4
ECA233G2618 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 84 35.7
ECA236G3459 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 115 30.4
ECA248G1829 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.4 115 30.4
Nitab4.5_0000097g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.9e-06 57.4 109 39.4
TWI31G0831 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.9e-06 57.4 94 35.1
Nitab4.5_0000420g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.5e-06 57.0 28 92.9
Nitab4.5_0003677g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.2e-06 56.6 160 33.8
Nitab4.5_0006432g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.2e-06 56.6 127 35.4
Ciclev10033806m.g Citrus clementina HOM05D013916 ORTHO05D000001 4.2e-06 56.2 85 35.3
ECA233G1049 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.8 182 23.6
ECA240G2430 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.8 115 29.6
ECA246G2397 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 55.8 115 29.6
TWI75G1222 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.5e-06 55.8 94 35.1
CSS0007719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-06 55.5 110 35.5
CSS0049531 Camellia sinensis var. sinensis HOM05D001731 ORTHO05D000001 7.2e-06 55.5 125 31.2
CANSAT01G2470 Cannabis sativa HOM05D000002 ORTHO05D000001 7.2e-06 55.5 95 31.6
ECA232G1865 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-06 55.5 115 29.6
Aa31LG10G10330 Aethionema arabicum HOM05D000002 ORTHO05D000001 9.4e-06 55.1 83 38.6
ECA234G1659 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-06 55.1 147 29.3
Sopen11g018750 Solanum pennellii HOM05D000002 ORTHO05D000001 9.4e-06 55.1 157 22.9


User provided reference genes

Program Settings