Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 0.0e+00 1483.0 734 100.0
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 0.0e+00 1389.4 735 93.9
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 0.0e+00 1294.6 733 88.7
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 0.0e+00 1221.8 696 87.8
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 0.0e+00 1178.7 658 89.4
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 0.0e+00 1173.7 658 88.9
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 0.0e+00 1141.3 738 79.8
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.2e-215 753.8 662 57.7
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 7.6e-210 734.6 731 52.4
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 2.3e-206 723.0 655 57.9
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 3.9e-206 722.2 733 52.7
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 8.7e-206 721.1 724 53.6
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 3.7e-204 715.7 659 54.8
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 4.8e-204 715.3 735 52.5
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.8e-203 713.4 721 53.5
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 4.1e-203 712.2 728 52.6
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 3.8e-201 705.7 752 50.1
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 3.8e-201 705.7 723 53.4
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 6.5e-201 704.9 747 51.3
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.6e-199 700.3 717 52.0
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 8.7e-198 694.5 725 51.4
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.9e-197 693.3 718 51.7
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 9.7e-197 691.0 728 51.2
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 2.6e-194 682.9 727 49.9
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 3.8e-193 679.1 716 50.0
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 5.5e-192 675.2 728 50.8
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 9.4e-192 674.5 722 50.6
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.1e-191 673.3 724 50.4
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 6.1e-191 671.8 724 50.4
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 7.9e-191 671.4 717 50.6
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 1.0e-190 671.0 721 50.1
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 1.4e-190 670.6 720 50.4
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 5.1e-190 668.7 727 49.0
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 5.7e-189 665.2 744 49.7
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 6.3e-188 661.8 693 51.5
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 3.1e-187 659.4 719 49.8
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 4.5e-186 655.6 732 49.3
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 2.7e-183 646.4 742 49.3
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 5.7e-181 638.6 722 47.9
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 7.4e-181 638.3 722 49.0
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 7.4e-181 638.3 727 47.5
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 7.0e-179 631.7 716 47.8
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 1.5e-178 630.6 722 46.8
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 2.0e-178 630.2 720 47.5
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 2.6e-178 629.8 732 47.3
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 4.5e-178 629.0 733 47.5
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 3.8e-177 625.9 722 46.8
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 1.5e-176 624.0 734 47.3
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 1.2e-175 620.9 723 47.4
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 6.1e-175 618.6 717 46.0
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 5.2e-174 615.5 729 47.1
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 6.7e-174 615.1 724 46.5
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 4.4e-173 612.5 722 46.1
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 9.7e-173 611.3 718 46.5
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 9.7e-173 611.3 718 46.5
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.2e-172 610.1 544 58.1
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 6.3e-172 608.6 718 46.2
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 1.8e-171 607.1 717 46.0
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 2.4e-171 606.7 724 46.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 4.1e-171 605.9 720 46.2
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.2e-170 604.4 532 58.3
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.1e-168 597.8 724 46.3
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 1.9e-168 597.0 733 46.4
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.5e-168 596.7 544 57.0
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 2.1e-167 593.6 739 45.5
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 2.7e-167 593.2 719 44.8
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 1.2e-165 587.8 725 46.2
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 4.4e-165 585.9 718 45.5
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 1.3e-164 584.3 730 45.2
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 5.4e-163 578.9 599 51.6
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 1.3e-161 574.3 730 44.8
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 2.2e-161 573.5 657 47.9
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 1.5e-160 570.9 684 46.2
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.9e-160 570.5 720 43.8
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 3.0e-158 563.1 667 47.2
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 2.2e-156 557.0 684 44.4
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 1.8e-155 553.9 727 43.1
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 6.6e-153 545.4 731 43.2
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.6e-151 540.8 724 43.0
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 1.0e-150 538.1 684 44.9
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 1.0e-150 538.1 531 53.3
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 4.4e-149 532.7 530 50.6
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 2.2e-148 530.4 531 50.7
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.2e-148 530.4 554 51.1
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 1.4e-147 527.7 530 49.6
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.6e-146 524.2 784 40.2
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 5.9e-146 522.3 529 50.9
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 3.9e-145 519.6 737 39.5
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 3.6e-143 513.1 533 48.2
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 8.9e-142 508.4 775 39.6
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 1.2e-141 508.1 686 44.2
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 1.3e-140 504.6 779 38.8
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 5.4e-139 499.2 687 43.4
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 2.0e-138 497.3 742 41.0
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 1.7e-132 477.6 533 48.8
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.0e-125 454.1 515 48.9
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 2.1e-122 444.1 699 40.1
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 3.0e-121 440.3 684 39.5
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 4.4e-117 426.4 738 37.0
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 7.1e-115 419.1 445 51.7
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 2.5e-112 410.6 456 49.8
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 4.0e-110 403.3 366 57.1
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 1.9e-107 394.4 720 35.8
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 2.1e-106 391.0 604 39.6
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 4.0e-94 350.1 654 36.9
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 2.9e-92 344.0 513 40.7
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 3.1e-78 297.4 756 30.8
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 3.1e-78 297.4 741 30.9
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 1.8e-65 255.0 229 58.1
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 3.0e-65 254.2 629 32.9
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 5.2e-57 226.9 516 32.0
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.7e-52 211.8 197 54.8
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.9e-52 211.1 258 49.6
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 5.0e-44 183.7 206 45.1
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.6e-42 178.7 148 61.5
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-42 178.7 280 38.2
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 1.0e-36 159.5 212 45.8
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 3.8e-36 157.5 223 43.9
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 1.9e-35 155.2 138 61.6
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 2.1e-34 151.8 298 33.6
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 4.3e-27 127.5 151 44.4
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 4.0e-25 120.9 111 52.3
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.1e-18 98.6 117 45.3
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 2.1e-18 98.6 342 27.5
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 1.1e-17 96.3 198 31.3
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 8.9e-17 93.2 98 45.9
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.2e-15 88.6 69 59.4
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 7.8e-13 80.1 200 31.5
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 7.8e-13 80.1 200 31.5
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 9.5e-11 73.2 73 45.2
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 8.1e-10 70.1 57 61.4


User provided reference genes

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