Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.7e-24 115.5 76 100.0
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 3.1e-21 104.8 86 84.9
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 3.1e-21 104.8 86 84.9
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 3.1e-21 104.8 86 84.9
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 5.2e-21 104.0 86 84.9
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 6.8e-21 103.6 86 76.7
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 1.5e-20 102.4 86 82.6
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.7e-19 99.0 86 66.3
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.7e-19 99.0 86 66.3
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 3.7e-19 97.8 86 65.1
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 3.7e-19 97.8 86 65.1
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 3.7e-19 97.8 83 83.1
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 4.9e-19 97.4 86 65.1
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 6.4e-19 97.1 86 65.1
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 6.4e-19 97.1 86 65.1
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 6.4e-19 97.1 86 65.1
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 8.3e-19 96.7 86 64.0
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 8.3e-19 96.7 83 66.3
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 8.3e-19 96.7 86 64.0
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 8.3e-19 96.7 83 66.3
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.1e-18 96.3 86 64.0
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.4e-18 95.9 86 64.0
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 1.4e-18 95.9 86 64.0
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.4e-18 95.9 86 64.0
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.4e-18 95.9 86 64.0
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 1.4e-18 95.9 86 65.1
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.4e-18 95.9 83 63.9
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.9e-18 95.5 86 64.0
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.9e-18 95.5 86 64.0
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.9e-18 95.5 83 63.9
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.9e-18 95.5 83 63.9
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.9e-18 95.5 83 63.9
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.9e-18 95.5 83 63.9
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.9e-18 95.5 83 63.9
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.9e-18 95.5 84 64.3
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 1.9e-18 95.5 86 64.0
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 2.4e-18 95.1 86 64.0
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.4e-18 95.1 86 62.8
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.4e-18 95.1 83 65.1
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 3.2e-18 94.7 83 65.1
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 4.1e-18 94.4 85 62.4
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 4.1e-18 94.4 84 63.1
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 5.4e-18 94.0 83 63.9
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 5.4e-18 94.0 83 63.9
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 5.4e-18 94.0 83 63.9
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 5.4e-18 94.0 83 63.9
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 5.4e-18 94.0 86 62.8
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 7.1e-18 93.6 86 64.0
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 9.2e-18 93.2 86 62.8
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 9.2e-18 93.2 83 63.9
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 1.2e-17 92.8 86 61.6
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 2.7e-17 91.7 83 60.2
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.7e-17 91.7 83 61.4
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 4.6e-17 90.9 88 61.4
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 4.6e-17 90.9 84 63.1
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 4.6e-17 90.9 84 63.1
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 4.6e-17 90.9 84 63.1
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 4.6e-17 90.9 84 63.1
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 4.6e-17 90.9 84 63.1
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 4.6e-17 90.9 83 62.7
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 6.0e-17 90.5 83 62.7
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 6.0e-17 90.5 83 59.0
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 7.8e-17 90.1 83 60.2
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 7.8e-17 90.1 83 61.4
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 1.7e-16 89.0 79 62.0
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 6.6e-16 87.0 86 70.9
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 5.6e-15 84.0 85 58.8
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 5.6e-15 84.0 85 58.8
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 9.5e-15 83.2 90 54.4
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 9.5e-15 83.2 84 56.0
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 1.2e-14 82.8 84 54.8
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.6e-14 82.4 86 65.1
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 3.6e-14 81.3 82 59.8
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 3.6e-14 81.3 82 59.8
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 1.1e-13 79.7 73 65.8
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 2.4e-13 78.6 55 76.4
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 6.8e-13 77.0 55 74.5
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 8.9e-13 76.6 55 76.4
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 1.2e-12 76.3 56 73.2
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.5e-12 75.9 90 51.1
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 4.4e-12 74.3 83 54.2
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 3.8e-11 71.2 35 97.1
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 6.4e-11 70.5 71 53.5
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 2.4e-10 68.6 35 91.4
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 2.4e-10 68.6 73 52.1
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 4.6e-09 64.3 34 91.2
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 1.0e-08 63.2 35 80.0
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 5.6e-07 57.4 33 81.8


User provided reference genes

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