Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 9.9e-106 386.7 187 100.0
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.1e-104 383.3 187 98.9
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.7e-97 359.4 187 94.1
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 2.2e-97 359.0 187 94.1
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 6.5e-97 357.5 187 93.6
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 1.9e-96 355.9 187 92.5
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 3.5e-95 351.7 186 90.3
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.3e-94 349.7 181 90.6
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 3.9e-94 348.2 187 89.3
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.1e-93 346.7 181 90.6
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 1.9e-93 345.9 185 89.7
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 2.5e-93 345.5 188 86.7
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 4.3e-93 344.7 184 88.6
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 7.4e-93 344.0 188 85.6
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 1.3e-92 343.2 185 87.0
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 1.3e-92 343.2 188 86.2
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.6e-92 342.8 187 86.1
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 3.7e-92 341.7 187 87.2
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 185 88.1
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 4.8e-92 341.3 185 88.1
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 187 87.2
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 6.2e-92 340.9 184 86.4
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 1.1e-91 340.1 187 88.2
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 2.4e-91 339.0 181 87.3
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 2.4e-91 339.0 188 84.0
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 2.4e-91 339.0 181 86.2
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 3.1e-91 338.6 184 85.9
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 1.5e-90 336.3 180 88.3
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 2.0e-90 335.9 185 84.9
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 2.0e-90 335.9 185 85.4
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.6e-90 335.5 187 85.0
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 4.5e-90 334.7 181 85.6
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 5.8e-90 334.3 181 85.6
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 7.6e-90 334.0 187 84.5
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.0e-89 333.6 185 82.7
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.0e-89 333.6 185 82.7
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 1.0e-89 333.6 181 84.0
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 1.0e-89 333.6 181 84.5
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.3e-89 333.2 180 85.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 1.3e-89 333.2 181 82.9
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.3e-89 333.2 181 84.0
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 1.3e-89 333.2 187 84.0
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.7e-89 332.8 180 85.0
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 1.7e-89 332.8 181 83.4
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.2e-89 332.4 181 82.9
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.2e-89 332.4 181 82.9
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 2.2e-89 332.4 184 83.7
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.9e-89 332.0 181 85.1
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.9e-89 332.0 181 84.0
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 8.4e-89 330.5 185 82.7
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 8.4e-89 330.5 185 82.7
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.1e-88 330.1 185 82.7
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 1.4e-88 329.7 181 83.4
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 1.4e-88 329.7 187 81.8
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.4e-88 329.7 187 81.8
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.4e-88 329.7 187 81.8
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.4e-88 329.7 181 84.0
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 2.5e-88 328.9 180 82.8
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 3.2e-88 328.6 181 83.4
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 5.5e-88 327.8 178 85.4
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 7.1e-88 327.4 180 83.3
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 1.2e-87 326.6 181 83.4
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 1.6e-87 326.2 181 83.4
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.6e-87 326.2 184 82.6
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 2.1e-87 325.9 185 81.1
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.5e-87 325.1 187 80.2
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 3.5e-87 325.1 181 81.2
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 3.5e-87 325.1 181 82.3
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 4.6e-87 324.7 174 86.2
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 4.6e-87 324.7 181 82.9
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 7.9e-87 323.9 181 81.2
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 7.9e-87 323.9 187 81.3
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 7.9e-87 323.9 184 82.6
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.0e-86 323.6 182 81.3
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.0e-86 323.6 181 81.8
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.3e-86 323.2 180 85.0
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 1.8e-86 322.8 181 82.3
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 82.2
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 2.3e-86 322.4 185 82.7
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 5.1e-86 321.2 180 80.6
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 6.7e-86 320.9 182 80.2
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 8.7e-86 320.5 182 80.2
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 8.7e-86 320.5 181 80.1
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.9e-85 319.3 180 80.6
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 2.5e-85 318.9 182 79.7
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 3.3e-85 318.5 180 81.1
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 3.3e-85 318.5 180 80.0
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 5.7e-85 317.8 180 80.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 5.7e-85 317.8 182 79.1
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 5.7e-85 317.8 181 81.2
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 7.4e-85 317.4 180 79.4
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 7.4e-85 317.4 180 80.0
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 1.3e-84 316.6 180 79.4
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.3e-84 316.6 182 78.6
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 1.3e-84 316.6 180 79.4
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.3e-84 316.6 182 78.6
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 1.3e-84 316.6 180 79.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 3.7e-84 315.1 193 77.7
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 78.3
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 8.2e-84 313.9 180 78.9
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 6.9e-83 310.8 172 81.4
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 5.0e-81 304.7 185 75.1
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.4e-80 303.1 185 75.1
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 4.2e-80 301.6 181 77.3
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 9.4e-80 300.4 181 77.9
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 2.7e-79 298.9 181 76.2
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 6.1e-79 297.7 181 75.7
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 4.3e-77 291.6 181 76.8
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 4.3e-77 291.6 181 76.2
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 9.7e-77 290.4 180 73.3
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 2.2e-76 289.3 181 75.1
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 2.8e-76 288.9 181 76.2
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 3.1e-75 285.4 181 74.6
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 1.2e-74 283.5 181 74.0
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 2.0e-74 282.7 181 72.9
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 2.0e-74 282.7 181 73.5
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 7.7e-74 280.8 173 72.3
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.3e-73 280.0 180 69.4
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 2.9e-73 278.9 184 69.0
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 1.0e-65 253.8 181 63.5
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.8e-62 243.0 180 56.1
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 5.9e-58 228.0 183 54.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.6e-55 219.9 181 53.0
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.7e-55 219.2 186 52.2
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 9.8e-53 210.7 172 59.3
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 3.7e-52 208.8 185 50.3
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 2.9e-49 199.1 185 48.6
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 1.2e-45 187.2 168 52.4
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 8.6e-41 171.0 180 46.7
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 5.7e-37 158.3 87 85.1
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 6.8e-30 134.8 172 41.3
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 2.3e-22 109.8 86 58.1
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 3.1e-22 109.4 154 35.1
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 9.8e-21 104.4 54 87.0
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.3e-09 66.6 88 37.5


User provided reference genes

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