Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-72 273.9 132 100.0
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-54 216.5 132 81.1
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-45 185.7 132 71.2
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-44 182.6 139 70.5
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-44 182.2 137 69.3
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-44 181.0 121 76.0
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-43 179.9 116 78.4
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-43 178.7 132 70.5
PGSC0003DMG400046524 Solanum tuberosum HOM05D001309 ORTHO05D000385 3.2e-42 175.3 132 66.7
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-41 171.4 107 80.4
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-39 166.0 137 64.2
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.4e-39 164.1 116 71.6
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-37 157.9 121 69.4
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-36 154.1 132 63.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.0e-35 153.7 121 65.3
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.3e-35 153.3 133 63.2
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-35 152.1 81 87.7
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-35 151.0 81 86.4
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-35 151.0 117 69.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 8.5e-35 150.6 121 62.0
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-34 149.8 122 66.4
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.5e-34 147.9 121 63.6
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-34 147.1 82 81.7
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-33 146.0 140 57.1
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 4.6e-33 144.8 121 60.3
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-32 141.4 84 77.4
Nitab4.5_0015781g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.7e-32 141.0 82 79.3
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.7e-32 140.6 137 56.9
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-31 140.2 124 62.1
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-31 139.4 81 80.2
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-31 139.0 82 79.3
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-31 138.7 107 69.2
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-31 138.3 81 81.5
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-31 138.3 74 82.4
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-30 136.3 131 58.8
Peaxi162Scf00524g00007 Petunia axillaris HOM05D001309 ORTHO05D000385 3.7e-30 135.2 120 58.3
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-28 130.2 68 85.3
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-28 129.4 66 89.4
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-28 128.6 82 75.6
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-27 126.7 79 74.7
Nitab4.5_0008623g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-27 126.7 79 75.9
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-27 126.3 68 85.3
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-27 125.6 137 54.0
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.5e-27 124.0 79 74.7
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-26 122.1 70 80.0
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-26 122.1 137 54.7
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-25 120.2 121 58.7
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.1e-25 117.9 79 74.7
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-25 117.5 59 89.8
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-24 116.3 132 51.5
Nitab4.5_0004688g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-24 116.3 85 67.1
Nitab4.5_0000261g0180 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-23 112.1 123 55.3
Nitab4.5_0002419g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.7e-23 111.3 81 69.1
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-22 109.0 56 87.5
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-22 107.8 132 51.5
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.2e-22 107.5 116 53.4
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-21 106.3 58 84.5
Nitab4.5_0001130g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-21 106.3 59 78.0
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-21 104.8 59 79.7
Nitab4.5_0008584g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-20 103.2 59 76.3
Nitab4.5_0007152g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-20 102.1 132 46.2
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-19 100.5 58 77.6
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-19 100.5 75 69.3
Nitab4.5_0005558g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-19 99.8 57 73.7
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-19 99.4 83 65.1
Nitab4.5_0000928g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-19 97.8 55 80.0
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.5e-19 97.8 69 66.7
Nitab4.5_0000440g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-18 94.4 50 84.0
Nitab4.5_0005502g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-18 94.0 107 51.4
Nitab4.5_0001199g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-17 92.4 57 73.7
Nitab4.5_0006526g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-16 88.2 49 79.6
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 5.2e-16 88.2 75 54.7
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 8.8e-16 87.4 55 70.9
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-15 86.7 78 62.8
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-15 86.3 75 62.7
Nitab4.5_0010256g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-15 85.9 111 49.5
Nitab4.5_0002530g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-15 85.5 78 53.8
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-15 85.1 127 43.3
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 1.3e-14 83.6 50 76.0
Nitab4.5_0003836g0040 Nicotiana tabacum HOM05D052659 ORTHO05D000385 2.4e-13 79.3 54 77.8
Nitab4.5_0003433g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-12 77.0 81 56.8
Nitab4.5_0026778g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-12 76.6 63 61.9
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-12 75.9 40 85.0
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-11 73.9 40 85.0
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 8.5e-11 70.9 80 48.8
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 1.5e-10 70.1 114 37.7
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 1.9e-10 69.7 94 36.2
COL.COLO4_24303 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-10 68.9 75 44.0
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 4.2e-10 68.6 74 44.6
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.2e-10 68.6 84 39.3
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 5.5e-10 68.2 101 38.6
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 7.2e-10 67.8 74 43.2
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.2e-10 67.8 74 43.2
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 1.2e-09 67.0 121 33.9
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.6e-09 65.5 74 41.9
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 3.6e-09 65.5 82 41.5
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 4.7e-09 65.1 92 32.6
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.1e-09 64.7 74 40.5
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.1e-09 64.7 78 35.9
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.3e-08 62.8 78 37.2
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.0e-08 62.4 101 31.7
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.0e-08 62.4 60 48.3
Gohir.A06G124402 Gossypium hirsutum HOM05D008576 ORTHO05D000385 4.0e-08 62.0 67 41.8
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.0e-08 62.0 74 39.2
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.0e-08 62.0 84 34.5
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 4.0e-08 62.0 60 48.3
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 4.0e-08 62.0 76 44.7
MBI08_g25554_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.7e-08 61.2 76 34.2
Solyc10g049515.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 8.8e-08 60.8 40 70.0
MBI12_g08677_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000385 1.2e-07 60.5 98 30.6
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.2e-07 60.5 78 38.5
ECA247G2658 Erigeron canadensis HOM05D001309 ORTHO05D000385 1.5e-07 60.1 76 35.5
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.5e-07 60.1 76 31.6
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.5e-07 60.1 107 34.6
Os05g0202500 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 1.5e-07 60.1 78 44.9
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 1.5e-07 60.1 58 48.3
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-07 59.7 75 34.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.3e-07 58.9 79 41.8
Hund11418 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.3e-07 58.9 91 36.3
Hund15645 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.3e-07 58.9 91 36.3
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 4.4e-07 58.5 86 31.4
Hund12494 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.4e-07 58.5 91 35.2
COL.COLO4_15543 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.5e-07 57.8 84 35.7
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-07 57.8 96 30.2
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 7.5e-07 57.8 85 35.3
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 9.7e-07 57.4 80 35.0
Hund01503 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.7e-07 57.4 91 36.3
Hund09968 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.7e-07 57.4 91 36.3
Hund10716 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.7e-07 57.4 91 35.2
Gohir.A10G125500 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.3e-06 57.0 67 38.8
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 1.3e-06 57.0 79 39.2
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-06 56.6 79 40.5
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-06 56.6 84 36.9
Lj1g0004304 Lotus japonicus HOM05D001309 ORTHO05D000385 1.7e-06 56.6 68 51.5
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.7e-06 56.6 96 34.4
Hund17387 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.7e-06 56.6 91 35.2
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 2.2e-06 56.2 91 33.0
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 2.2e-06 56.2 61 42.6
Hund29993 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.2e-06 56.2 91 35.2
AUR62041080 Chenopodium quinoa HOM05D008576 ORTHO05D000385 2.8e-06 55.8 108 32.4
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 2.8e-06 55.8 95 33.7
CiPaw.04G150200 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.7e-06 55.5 67 37.3
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.7e-06 55.5 63 38.1
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.7e-06 55.5 84 28.6
Lsat_1_v5_gn_7_106640 Lactuca sativa HOM05D011604 ORTHO05D012513 3.7e-06 55.5 127 25.2
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.8e-06 55.1 68 39.7
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 4.8e-06 55.1 54 46.3
Nn2g14848 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.8e-06 55.1 118 27.1
Prupe.6G157700 Prunus persica HOM05D000539 ORTHO05D000233 6.3e-06 54.7 75 36.0
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 6.3e-06 54.7 68 41.2
Hund13918 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.3e-06 54.7 91 35.2
GSVIVG01019142001 Vitis vinifera HOM05D008595 ORTHO05D009597 6.3e-06 54.7 75 30.7
BolC7t42319H Brassica oleracea HOM05D022254 ORTHO05D000233 8.2e-06 54.3 74 39.2
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.2e-06 54.3 74 35.1
TAR624G0746 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.2e-06 54.3 78 37.2


User provided reference genes

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