Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.2e-133 477.2 241 100.0
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.0e-107 393.7 266 79.7
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.7e-95 352.4 267 72.3
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.6e-92 343.2 267 70.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.6e-90 335.9 267 70.4
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 4.0e-83 312.0 266 66.2
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 6.6e-78 294.7 269 61.0
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 3.3e-77 292.4 267 62.2
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 7.3e-77 291.2 268 60.8
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.1e-76 289.7 200 73.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.6e-76 288.9 181 79.6
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.1e-75 287.3 220 70.0
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.8e-75 286.6 280 59.6
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 4.0e-75 285.4 200 73.0
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 4.0e-75 285.4 267 61.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 5.2e-75 285.0 187 75.4
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 8.9e-75 284.3 267 60.7
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.6e-74 282.7 221 69.7
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.6e-74 282.7 178 78.7
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 7.6e-74 281.2 266 62.0
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.3e-73 280.4 178 79.2
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 4.9e-73 278.5 220 68.6
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 6.4e-73 278.1 263 58.9
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.4e-72 276.9 251 60.2
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.4e-72 276.9 195 72.3
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 4.2e-72 275.4 191 72.8
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 4.2e-72 275.4 191 72.8
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 5.4e-72 275.0 260 58.8
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 5.4e-72 275.0 250 58.8
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 5.4e-72 275.0 197 71.1
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.6e-71 273.5 272 57.4
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 2.7e-71 272.7 187 74.3
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 6.0e-71 271.6 270 56.7
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.3e-70 269.6 229 62.9
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.3e-70 269.6 188 69.7
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 3.9e-70 268.9 271 56.1
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.1e-70 268.5 264 59.8
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.1e-69 267.3 265 58.1
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.1e-69 267.3 268 58.6
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.9e-69 266.5 266 59.0
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.5e-69 266.2 237 60.3
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 3.3e-69 265.8 258 59.7
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 7.3e-69 264.6 272 54.4
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 9.6e-69 264.2 208 64.9
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 9.6e-69 264.2 197 68.0
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.1e-68 263.1 273 58.2
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 6.2e-68 261.5 283 55.8
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.4e-67 260.4 272 58.5
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 5.3e-67 258.5 190 70.5
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 5.3e-67 258.5 259 57.5
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.2e-66 257.3 197 68.5
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.5e-66 256.9 197 67.0
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 3.4e-66 255.8 249 57.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 4.4e-66 255.4 198 65.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.3e-65 253.8 196 67.9
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.3e-65 253.8 187 68.4
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.2e-65 253.1 178 70.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.9e-65 252.7 249 57.4
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.9e-65 252.7 186 68.3
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.9e-65 252.7 235 60.9
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 3.8e-65 252.3 252 57.5
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 4.9e-65 251.9 184 69.6
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 4.9e-65 251.9 201 65.2
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 8.4e-65 251.1 180 69.4
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.4e-64 250.4 265 55.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.4e-64 249.6 249 56.2
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 7.1e-64 248.1 178 69.1
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 9.3e-64 247.7 185 67.6
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.2e-63 247.3 259 54.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.7e-63 246.1 262 55.0
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 3.5e-63 245.7 251 55.4
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.5e-63 245.7 268 53.7
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.3e-62 243.0 231 56.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 8.7e-62 241.1 177 66.7
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.1e-61 240.7 177 65.5
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.2e-58 230.7 153 72.5
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.2e-58 230.7 188 60.6
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.6e-58 229.6 259 52.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.9e-56 223.4 192 61.5
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 7.9e-55 218.0 265 50.2
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.9e-54 215.7 233 53.6
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 6.7e-54 214.9 183 60.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.1e-53 214.2 192 60.9
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.8e-51 206.8 259 50.2
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 2.0e-50 203.4 230 48.3
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 3.4e-50 202.6 187 57.2
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 1.7e-49 200.3 192 54.2
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 8.7e-46 188.0 114 77.2
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 6.3e-44 181.8 172 56.4
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.1e-43 181.0 107 79.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.5e-40 169.9 123 72.4
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 4.2e-40 169.1 135 63.7
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 3.3e-37 159.5 215 49.3
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.9e-33 146.4 129 61.2
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 7.2e-32 141.7 163 51.5
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 3.0e-30 136.3 179 46.4
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-13 81.3 57 63.2
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.7e-12 77.4 41 82.9
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 2.8e-12 76.6 38 92.1
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.6e-10 70.9 82 51.2


User provided reference genes

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