Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008623g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-33 144.8 76 100.0
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.6e-24 113.2 84 76.2
Nitab4.5_0003433g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.1e-22 106.7 79 75.9
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-21 106.3 93 66.7
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-21 104.8 97 63.9
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-21 104.8 70 85.7
Nitab4.5_0003970g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-21 104.4 70 81.4
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-21 104.0 96 66.7
Nitab4.5_0001523g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-21 104.0 97 63.9
Nitab4.5_0001369g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-20 100.5 97 61.9
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-19 99.4 97 60.8
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-19 99.0 70 78.6
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-19 99.0 97 62.9
Nitab4.5_0007152g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-19 98.6 75 73.3
Nitab4.5_0000644g0170 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-19 98.2 97 60.8
Nitab4.5_0014949g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-19 97.4 89 65.2
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-18 95.1 92 64.1
Nitab4.5_0000049g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-18 93.2 95 57.9
Nitab4.5_0000415g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-18 93.2 95 57.9
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-17 92.4 96 55.2
Nitab4.5_0000356g0120 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-17 90.5 62 80.6
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-17 90.5 92 62.0
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-16 89.7 97 52.6
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-16 89.4 92 57.6
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-16 89.0 93 58.1
Nitab4.5_0007229g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-16 88.6 97 52.6
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-16 88.2 97 53.6
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-16 88.2 97 57.7
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-16 87.0 96 55.2
Nitab4.5_0001132g0060 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.9e-15 85.5 95 53.7
Nitab4.5_0003283g0020 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.9e-15 85.5 83 60.2
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-15 84.0 95 52.6
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-15 83.2 96 53.1
Nitab4.5_0000007g0330 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-14 82.8 97 53.6
Nitab4.5_0000774g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-14 82.4 95 52.6
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-14 82.4 94 51.1
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-14 81.3 97 53.6
Nitab4.5_0002263g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-14 80.9 89 53.9
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.2e-14 80.5 70 71.4
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-13 78.6 76 63.2
Nitab4.5_0000866g0110 Nicotiana tabacum HOM05D001309 ORTHO05D009935 1.5e-12 75.9 53 81.1
Nitab4.5_0003082g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-12 75.9 81 58.0
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-12 75.9 99 49.5
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-12 75.5 71 63.4
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-11 71.2 98 44.9
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-11 70.9 53 75.5
PGSC0003DMG400042577 Solanum tuberosum HOM05D001309 ORTHO05D000385 6.4e-11 70.5 95 47.4
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.4e-11 70.1 81 53.1
PGSC0003DMG400039811 Solanum tuberosum HOM05D001309 ORTHO05D000385 1.1e-10 69.7 90 50.0
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-10 68.6 99 45.5
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-10 67.4 76 57.9
Nitab4.5_0003622g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-10 66.6 72 54.2
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-09 65.5 99 43.4
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-09 65.1 76 50.0
Nitab4.5_0007969g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.0e-09 63.9 75 54.7
Nitab4.5_0000220g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-09 63.5 77 53.2
Nitab4.5_0000931g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 62.4 94 41.5
Nitab4.5_0002530g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 62.4 97 46.4
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-08 62.0 72 52.8
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-08 61.2 99 45.5
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-08 60.5 85 41.2
Nitab4.5_0003836g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.7e-08 60.1 53 62.3
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-07 58.9 41 75.6
Nitab4.5_0005502g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-07 58.5 79 53.2
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-07 58.2 85 41.2
Nitab4.5_0000151g0380 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-07 57.8 99 44.4
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 2.1e-06 55.5 97 37.1
Nitab4.5_0006065g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-06 55.1 97 40.2
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.1e-06 53.5 70 48.6


User provided reference genes

Program Settings