Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 5.1e-134 481.1 247 100.0
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 2.6e-109 399.1 209 97.1
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 2.8e-100 369.0 201 93.5
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 3.7e-84 315.5 203 78.8
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 4.0e-78 295.4 201 77.1
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 1.3e-73 280.4 197 75.1
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 1.3e-73 280.4 197 75.1
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 5.4e-59 231.9 167 75.4
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 8.1e-47 191.4 200 55.5
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.8e-46 190.3 199 55.3
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 5.2e-46 188.7 196 56.6
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 8.4e-44 181.4 204 53.9
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 4.2e-43 179.1 195 53.3
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 4.2e-43 179.1 196 52.6
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 9.3e-43 177.9 190 53.2
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 1.6e-42 177.2 196 55.1
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 6.0e-42 175.3 197 51.8
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 7.8e-42 174.9 195 54.9
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 1.3e-41 174.1 203 53.7
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.5e-40 170.6 202 50.5
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.5e-40 170.6 202 50.5
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 1.5e-40 170.6 199 53.3
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 3.3e-40 169.5 204 52.5
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 4.3e-40 169.1 201 49.8
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.1e-39 166.8 223 48.4
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 2.8e-39 166.4 181 54.7
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 6.2e-39 165.2 185 48.1
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 6.2e-39 165.2 200 50.0
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 8.1e-39 164.9 194 50.5
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.4e-38 164.1 197 48.7
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.8e-38 163.7 197 48.7
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 6.9e-38 161.8 205 48.3
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 1.2e-37 161.0 201 48.8
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.0e-37 160.2 194 50.0
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 2.6e-37 159.8 185 48.6
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 5.8e-37 158.7 198 49.0
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 5.8e-37 158.7 192 47.4
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 7.6e-37 158.3 204 49.0
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.3e-36 157.5 192 47.9
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 1.3e-36 157.5 189 46.0
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 1.7e-36 157.1 201 47.8
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 2.2e-36 156.8 188 48.4
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 4.9e-36 155.6 196 50.5
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 4.9e-36 155.6 204 47.5
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 1.1e-35 154.5 200 47.0
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 1.1e-35 154.5 188 50.5
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 1.4e-35 154.1 200 48.5
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 1.4e-35 154.1 200 48.5
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.4e-35 153.3 197 50.8
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 2.4e-35 153.3 189 49.2
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 5.4e-35 152.1 201 48.8
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 7.1e-35 151.8 191 47.6
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 4.6e-34 149.1 197 49.7
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 4.6e-34 149.1 190 46.8
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 7.9e-34 148.3 184 49.5
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 3.0e-33 146.4 205 48.8
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 3.0e-33 146.4 206 47.1
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 3.9e-33 146.0 202 46.5
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 5.1e-33 145.6 187 46.0
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 6.6e-33 145.2 186 47.8
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 1.1e-32 144.4 202 45.0
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.5e-32 144.1 193 47.2
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 3.3e-32 142.9 197 49.2
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 1.3e-31 141.0 206 44.2
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 1.3e-31 141.0 186 48.9
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 1.6e-31 140.6 189 48.1
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 2.1e-31 140.2 198 47.0
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 2.1e-31 140.2 206 44.2
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 3.6e-31 139.4 185 43.2
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 3.6e-31 139.4 210 42.9
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 8.1e-31 138.3 200 45.0
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 1.4e-30 137.5 206 43.2
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 1.4e-30 137.5 211 40.8
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 1.4e-30 137.5 192 46.9
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 1.8e-30 137.1 187 44.4
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 1.8e-30 137.1 187 44.4
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 1.8e-30 137.1 202 46.0
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.1e-30 136.3 206 43.2
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 3.1e-30 136.3 197 44.2
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 5.3e-30 135.6 203 44.8
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 9.0e-30 134.8 206 41.7
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 1.2e-29 134.4 184 46.7
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 1.2e-29 134.4 196 45.9
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 1.5e-29 134.0 184 47.8
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 2.6e-29 133.3 190 48.9
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 4.5e-29 132.5 206 41.7
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 7.6e-29 131.7 191 44.5
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 9.9e-29 131.3 195 41.0
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 1.7e-28 130.6 185 42.2
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 2.2e-28 130.2 237 39.7
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 2.9e-28 129.8 200 46.0
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 4.9e-28 129.0 199 42.2
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 2.4e-27 126.7 204 42.2
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 5.5e-27 125.6 183 46.4
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 7.1e-27 125.2 185 47.0
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 2.7e-26 123.2 196 43.9
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 1.5e-24 117.5 180 44.4
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 7.4e-24 115.2 193 42.0
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 9.6e-24 114.8 191 42.9
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 9.6e-24 114.8 191 42.9
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 1.3e-23 114.4 200 42.5
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 2.8e-23 113.2 191 44.0
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 6.2e-23 112.1 196 41.8
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 1.4e-22 110.9 193 42.5
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 2.4e-22 110.2 195 44.6
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 4.0e-22 109.4 209 39.7
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 6.9e-22 108.6 193 42.0
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 6.9e-22 108.6 193 42.0
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 1.5e-21 107.5 197 41.1
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 2.9e-20 103.2 197 39.6
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 1.1e-19 101.3 184 36.4
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 2.5e-19 100.1 196 38.3
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 7.1e-19 98.6 200 36.5
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 5.1e-17 92.4 193 36.8
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 8.7e-17 91.7 199 38.2
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 3.3e-16 89.7 177 36.2
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 7.4e-16 88.6 125 43.2
MBI16_g31813_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 1.3e-15 87.8 171 36.8
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 1.8e-14 84.0 101 47.5
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 4.1e-14 82.8 185 37.8
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 3.4e-13 79.7 188 36.7
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 2.7e-10 70.1 190 30.0
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 6.7e-09 65.5 67 49.3
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 2.5e-08 63.5 98 41.8
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 6.3e-07 58.9 238 29.0


User provided reference genes

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