Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.4e-119 433.0 219 100.0
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 5.2e-114 414.5 219 95.4
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 2.6e-97 359.0 226 82.7
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 7.8e-94 347.4 229 79.0
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 1.3e-93 346.7 229 79.5
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 1.1e-87 327.0 225 74.7
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 3.2e-79 298.9 214 73.4
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 4.0e-66 255.4 227 59.0
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 1.4e-63 246.9 219 58.9
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 3.2e-63 245.7 212 56.6
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 2.5e-60 236.1 187 62.0
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 2.5e-60 236.1 204 57.8
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 4.3e-60 235.3 211 55.9
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 1.4e-58 230.3 214 56.1
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 2.0e-57 226.5 180 63.9
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 2.2e-56 223.0 217 54.4
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 8.7e-53 211.1 220 53.6
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 1.1e-52 210.7 213 54.0
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 3.3e-52 209.1 213 56.8
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 4.3e-52 208.8 178 59.0
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 5.7e-52 208.4 217 51.6
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 2.8e-51 206.1 218 50.5
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.8e-51 206.1 211 51.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 4.8e-51 205.3 210 51.4
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 4.8e-51 205.3 210 50.5
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 6.3e-51 204.9 217 51.2
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 6.3e-51 204.9 220 52.7
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 8.2e-51 204.5 219 50.7
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 1.4e-50 203.8 205 53.2
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 1.4e-50 203.8 207 52.2
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.8e-50 203.4 210 52.4
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 1.5e-49 200.3 219 49.8
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 1.5e-49 200.3 216 49.1
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 5.9e-49 198.4 211 52.6
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.0e-48 197.6 217 50.7
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 2.2e-48 196.4 178 57.3
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 3.8e-48 195.7 215 50.7
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 8.5e-48 194.5 217 49.3
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 8.5e-48 194.5 225 51.6
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 1.1e-47 194.1 210 51.4
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.4e-47 193.7 213 52.1
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.4e-47 193.7 175 55.4
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 1.9e-47 193.4 221 48.4
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 3.2e-47 192.6 178 56.7
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 3.2e-47 192.6 216 48.1
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 7.2e-47 191.4 178 56.7
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 1.6e-46 190.3 226 47.8
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 1.6e-46 190.3 218 50.0
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 2.1e-46 189.9 215 50.2
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.1e-46 189.9 215 50.2
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.1e-46 189.9 179 55.3
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 4.6e-46 188.7 211 48.8
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 4.6e-46 188.7 217 47.9
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 6.1e-46 188.3 216 48.6
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 1.4e-45 187.2 186 54.3
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.8e-45 186.8 226 47.3
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 1.8e-45 186.8 220 47.7
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.3e-45 186.4 179 54.7
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.9e-45 185.7 215 48.8
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.9e-45 185.7 180 55.6
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 5.1e-45 185.3 181 54.1
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.5e-44 183.7 211 47.4
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 5.7e-44 181.8 297 39.4
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 1.3e-43 180.6 197 50.3
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.7e-43 180.3 216 46.8
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 2.8e-43 179.5 216 45.8
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 6.3e-43 178.3 217 47.0
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 2.4e-42 176.4 210 46.2
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 3.1e-42 176.0 222 44.6
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 3.1e-42 176.0 214 48.6
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 4.1e-42 175.6 187 48.7
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 1.2e-41 174.1 221 47.5
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 2.0e-41 173.3 214 45.3
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 2.0e-41 173.3 212 49.5
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 3.4e-41 172.6 219 47.0
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 4.5e-41 172.2 138 60.9
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 1.0e-40 171.0 171 53.8
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 1.0e-40 171.0 178 50.6
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 1.3e-40 170.6 222 45.5
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 2.9e-40 169.5 182 54.9
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.1e-39 167.5 221 42.5
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 2.5e-39 166.4 140 62.1
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 4.2e-39 165.6 190 49.5
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 1.2e-38 164.1 182 50.0
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 3.0e-37 159.5 172 51.2
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 1.5e-36 157.1 191 47.1
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 9.7e-36 154.5 184 48.4
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 6.3e-35 151.8 142 55.6
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 3.1e-34 149.4 193 45.6
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 2.6e-33 146.4 172 48.3
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 3.5e-33 146.0 137 56.2
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.0e-32 144.4 214 40.7
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 3.2e-31 139.4 174 47.1
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 4.2e-31 139.0 177 46.3
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 5.5e-31 138.7 178 44.4
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 5.7e-28 128.6 208 37.5
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 6.3e-27 125.2 164 43.9
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.2e-25 120.9 142 47.2
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 1.2e-25 120.9 145 44.1
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 1.1e-23 114.4 149 46.3
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 2.5e-23 113.2 144 46.5
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 8.0e-22 108.2 106 59.4
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 2.3e-21 106.7 162 38.9
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 7.2e-15 85.1 128 36.7
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 8.8e-13 78.2 69 55.1
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 8.8e-13 78.2 69 55.1
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 4.4e-12 75.9 75 53.3
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 9.8e-12 74.7 168 31.0
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 4.9e-11 72.4 119 36.1
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 1.4e-10 70.9 145 35.2
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 5.9e-09 65.5 87 42.5
CARHR292590 Cardamine hirsuta HOM05D007009 ORTHO05D008451 2.8e-06 56.6 40 70.0
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 6.1e-06 55.5 83 32.5


User provided reference genes

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