Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.6e-169 599.4 299 100.0
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.0e-156 555.8 300 94.0
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 7.1e-106 387.9 310 69.0
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 4.4e-79 298.9 294 60.9
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 8.8e-72 274.6 174 82.2
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 3.7e-62 242.7 169 78.7
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 3.4e-55 219.5 163 74.8
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.7e-52 209.9 278 46.0
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-50 204.5 284 44.7
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.8e-48 197.2 275 44.7
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 3.7e-46 189.5 278 43.2
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 6.3e-46 188.7 297 42.8
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.4e-45 187.6 303 41.3
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 2.4e-45 186.8 282 45.7
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 8.6e-43 178.3 296 39.5
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 2.5e-42 176.8 272 40.4
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.5e-42 176.8 265 42.6
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 7.3e-42 175.3 274 40.5
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 9.5e-42 174.9 308 39.6
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 6.1e-41 172.2 294 39.8
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 4.0e-40 169.5 198 53.0
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 3.4e-39 166.4 306 42.2
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 7.5e-39 165.2 298 42.6
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 3.2e-37 159.8 262 42.0
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 3.2e-37 159.8 274 37.2
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.2e-36 157.9 261 38.7
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 2.7e-36 156.8 300 38.3
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 2.7e-36 156.8 233 42.1
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 3.5e-36 156.4 261 41.8
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.8e-36 155.2 230 44.8
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 7.8e-36 155.2 230 44.8
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.0e-35 154.8 298 38.3
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.7e-35 154.1 261 39.8
PGSC0003DMG401028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 3.0e-35 153.3 134 60.4
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 8.6e-35 151.8 293 38.2
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 1.9e-34 150.6 232 42.2
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 1.2e-33 147.9 172 52.9
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 1.2e-33 147.9 289 34.9
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 2.1e-33 147.1 276 38.8
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 3.6e-33 146.4 259 36.7
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 4.7e-33 146.0 259 36.3
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 1.4e-32 144.4 256 37.5
Solyc04g050310.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 5.2e-32 142.5 147 55.1
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 6.8e-32 142.1 256 35.2
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.6e-31 140.2 228 41.7
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 2.6e-31 140.2 204 38.7
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 3.4e-31 139.8 298 35.9
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 3.4e-31 139.8 298 38.3
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 3.4e-31 139.8 191 44.5
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 4.4e-31 139.4 194 40.7
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 5.8e-31 139.0 195 40.5
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 9.8e-31 138.3 215 41.9
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 1.7e-30 137.5 215 41.9
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 2.9e-30 136.7 191 39.8
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 3.7e-30 136.3 256 37.5
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 4.9e-30 136.0 182 42.3
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 4.9e-30 136.0 324 35.2
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 1.1e-29 134.8 196 40.3
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 1.1e-29 134.8 215 41.4
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.4e-29 134.4 254 34.3
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.4e-29 133.7 226 41.2
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 4.1e-29 132.9 206 37.4
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 5.4e-29 132.5 218 37.2
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 5.4e-29 132.5 266 35.0
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.2e-28 131.3 298 33.2
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 1.2e-28 131.3 322 37.9
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 2.1e-28 130.6 193 39.4
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 2.1e-28 130.6 279 34.8
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 3.5e-28 129.8 206 37.4
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 4.6e-28 129.4 264 35.6
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 4.6e-28 129.4 191 39.3
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 4.6e-28 129.4 201 34.8
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 6.0e-28 129.0 273 34.8
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 5.1e-27 125.9 313 36.4
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 8.6e-27 125.2 194 38.7
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 8.6e-27 125.2 257 39.3
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.5e-26 124.4 194 38.7
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 9.5e-26 121.7 206 38.3
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 2.8e-25 120.2 262 34.7
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 3.6e-25 119.8 234 35.9
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 4.7e-25 119.4 190 35.3
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 6.2e-25 119.0 193 36.8
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 1.4e-24 117.9 182 39.0
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 2.3e-24 117.1 194 39.7
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 3.1e-24 116.7 178 38.8
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.0e-24 116.3 225 36.0
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 2.0e-23 114.0 189 40.2
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.6e-23 113.6 280 34.3
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.4e-23 113.2 235 34.9
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 4.4e-23 112.8 184 41.8
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 4.4e-23 112.8 181 42.0
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.4e-23 112.8 191 38.2
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 4.4e-23 112.8 235 37.0
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.2e-22 110.5 218 36.2
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.2e-22 110.5 218 36.2
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.7e-22 109.8 203 36.5
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 6.4e-22 109.0 243 33.3
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.1e-21 108.2 276 31.2
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.4e-21 107.8 203 35.5
Sopen04g018350 Solanum pennellii HOM05D004244 ORTHO05D004964 4.1e-21 106.3 81 71.6
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.1e-20 104.0 212 33.5
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 2.7e-20 103.6 203 34.5
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 3.5e-20 103.2 200 33.0
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 3.5e-20 103.2 205 37.1
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 7.8e-20 102.1 301 30.6
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 1.0e-19 101.7 193 37.3
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 1.0e-19 101.7 191 30.9
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 1.3e-19 101.3 217 34.1
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 1.7e-19 100.9 223 33.6
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 2.3e-19 100.5 212 35.4
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 5.1e-19 99.4 226 32.7
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 2.5e-18 97.1 188 39.4
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 2.8e-17 93.6 242 32.6
AUR62006986 Chenopodium quinoa HOM05D004244 ORTHO05D004964 6.2e-17 92.4 168 35.7
C03p40780 Brassica napus HOM05D004244 ORTHO05D004964 8.1e-17 92.0 189 36.5
BolC3t16346H Brassica oleracea HOM05D004244 ORTHO05D004964 8.1e-17 92.0 189 36.5
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 1.4e-16 91.3 186 33.9
BcaC01g04379 Brassica carinata HOM05D004244 ORTHO05D004964 1.8e-16 90.9 185 36.8
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 6.8e-16 89.0 179 36.9
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.5e-15 87.8 153 38.6
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 2.6e-15 87.0 241 27.4
A03p33580 Brassica napus HOM05D004244 ORTHO05D004964 4.4e-15 86.3 189 34.9
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 4.4e-15 86.3 153 37.9
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 9.9e-15 85.1 150 37.3
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 2.2e-14 84.0 219 31.1
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 3.8e-14 83.2 195 31.3
BraA03t12533Z Brassica rapa HOM05D004244 ORTHO05D004964 6.4e-14 82.4 189 34.4
Ah.06g187950 Amaranthus hybridus HOM05D004244 ORTHO05D004964 8.4e-14 82.0 128 37.5
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 8.4e-14 82.0 226 26.5
BcaB04g19340 Brassica carinata HOM05D004244 ORTHO05D004964 1.4e-13 81.3 183 34.4
Aa31LG5G14830 Aethionema arabicum HOM05D004244 ORTHO05D004964 3.2e-13 80.1 270 28.5
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.2e-12 78.2 227 31.7
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 1.2e-12 78.2 182 34.6
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 2.1e-12 77.4 237 25.7
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.7e-12 77.0 175 32.0
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 2.3e-11 73.9 179 32.4
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 3.0e-11 73.6 202 30.2
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 5.1e-11 72.8 307 26.1
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 6.6e-11 72.4 166 30.7
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.5e-10 70.5 254 26.4
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 5.6e-10 69.3 267 25.8
Zm00001eb360230 Zea mays HOM05D004244 ORTHO05D004964 7.3e-10 68.9 276 25.4
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 1.3e-09 68.2 130 36.2
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 1.6e-09 67.8 177 29.4
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 3.6e-09 66.6 187 30.5
Zm00001eb156930 Zea mays HOM05D004244 ORTHO05D004964 4.8e-09 66.2 122 34.4
DCAR_030773 Daucus carota HOM05D004244 ORTHO05D004964 6.2e-09 65.9 151 35.8
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 6.2e-09 65.9 73 41.1
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 1.4e-08 64.7 277 23.5
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 1.4e-08 64.7 202 25.7
Peaxi162Scf00760g00213 Petunia axillaris HOM05D004244 ORTHO05D004964 1.2e-07 61.6 124 37.9
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 2.0e-07 60.8 192 25.5
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.9e-06 57.0 208 25.0
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 3.8e-06 56.6 82 36.6


User provided reference genes

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