Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008568g0060 Nicotiana tabacum HOM05D001501 ORTHO05D001329 5.3e-96 354.4 182 100.0
Nitab4.5_0001192g0020 Nicotiana tabacum HOM05D001501 ORTHO05D001329 9.5e-61 237.3 182 71.4
PGSC0003DMG400010464 Solanum tuberosum HOM05D001501 ORTHO05D001329 5.4e-48 194.9 236 53.8
Peaxi162Scf00472g00220 Petunia axillaris HOM05D001501 ORTHO05D001329 1.9e-40 169.9 242 47.9
Sopen10g033670 Solanum pennellii HOM05D001501 ORTHO05D001329 1.1e-37 160.6 209 51.2
Solyc10g084230.2 Solanum lycopersicum HOM05D001501 ORTHO05D001329 1.9e-37 159.8 209 50.7
Manes.08G004900 Manihot esculenta HOM05D001501 ORTHO05D001329 1.6e-36 156.8 269 42.8
TAR633G1143 Trochodendron aralioides HOM05D001501 ORTHO05D001329 6.2e-36 154.8 259 43.2
Dinv37270 Davidia involucrata HOM05D001501 ORTHO05D001329 5.2e-35 151.8 249 43.4
MSTRG.5730 Avicennia marina HOM05D001501 ORTHO05D001329 8.9e-35 151.0 256 40.6
Duzib128G1910 Durio zibethinus HOM05D001501 ORTHO05D001329 2.0e-34 149.8 267 39.3
Actinidia19693 Actinidia chinensis HOM05D001501 ORTHO05D001329 4.4e-34 148.7 229 44.1
Cpa.g.sc705.1 Carica papaya HOM05D001501 ORTHO05D001329 5.8e-34 148.3 251 41.0
Cc06_g03740 Coffea canephora HOM05D001501 ORTHO05D001329 8.4e-33 144.4 271 40.2
Eucgr.A01165 Eucalyptus grandis HOM05D001501 ORTHO05D001329 1.1e-32 144.1 252 40.5
QL07p044984 Quercus lobata HOM05D001501 ORTHO05D001329 1.9e-32 143.3 253 39.9
CSS0015375 Camellia sinensis var. sinensis HOM05D001501 ORTHO05D001329 3.5e-31 139.0 266 39.5
Gorai.009G419000 Gossypium raimondii HOM05D001501 ORTHO05D001329 2.3e-30 136.3 239 39.7
Sabra06G0102000 Salix brachista HOM05D001501 ORTHO05D001329 3.0e-30 136.0 272 38.6
PGR004G0314 Punica granatum HOM05D001501 ORTHO05D001329 5.1e-30 135.2 251 37.8
Lalb_Chr25g0289181 Lupinus albus HOM05D001501 ORTHO05D001329 6.6e-30 134.8 242 38.4
Glyma.03G179100 Glycine max HOM05D001501 ORTHO05D001329 3.3e-29 132.5 263 36.9
Gohir.A04G075300 Gossypium hirsutum HOM05D001501 ORTHO05D001329 3.3e-29 132.5 231 41.1
Gohir.D04G114400 Gossypium hirsutum HOM05D001501 ORTHO05D001329 3.3e-29 132.5 229 40.6
Nn2g13038 Nelumbo nucifera HOM05D001501 ORTHO05D001329 3.3e-29 132.5 270 38.1
TWI53G2136 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 3.3e-29 132.5 273 37.0
GSVIVG01025651001 Vitis vinifera HOM05D001501 ORTHO05D001329 4.3e-29 132.1 268 38.8
CANSAT80G0732 Cannabis sativa HOM05D001501 ORTHO05D001329 7.3e-29 131.3 279 37.3
Potri.006G129800 Populus trichocarpa HOM05D001501 ORTHO05D001329 2.1e-28 129.8 280 37.1
Glyma.19G179800 Glycine max HOM05D001501 ORTHO05D001329 2.8e-28 129.4 259 37.1
Cfa017527 Carpinus fangiana HOM05D001501 ORTHO05D001329 4.7e-28 128.6 276 37.7
Aqoxy1G02757 Aquilegia oxysepala HOM05D001501 ORTHO05D001329 6.2e-28 128.3 256 36.7
Gorai.006G167900 Gossypium raimondii HOM05D001501 ORTHO05D001329 6.2e-28 128.3 272 36.8
Prupe.6G239300 Prunus persica HOM05D001501 ORTHO05D001329 1.4e-27 127.1 299 35.1
TPR.G27593 Trifolium pratense HOM05D001501 ORTHO05D001329 1.4e-27 127.1 266 35.3
arahy.Tifrunner.gnm1.ann1.F8ZCRL Arachis hypogaea HOM05D001501 ORTHO05D001329 1.8e-27 126.7 278 35.6
Rhsim05G0184000 Rhododendron simsii HOM05D001501 ORTHO05D001329 1.8e-27 126.7 267 34.5
Gohir.D09G146700 Gossypium hirsutum HOM05D001501 ORTHO05D001329 4.0e-27 125.6 272 36.4
RcHm_v2.0_Chr3g0469151 Rosa chinensis HOM05D001501 ORTHO05D001329 1.2e-26 124.0 272 37.5
Lalb_Chr20g0112821 Lupinus albus HOM05D001501 ORTHO05D001329 2.0e-26 123.2 250 36.4
VMungo1383G2761 Vigna mungo HOM05D001501 ORTHO05D001329 2.6e-26 122.9 261 34.9
arahy.Tifrunner.gnm1.ann1.X384WT Arachis hypogaea HOM05D001501 ORTHO05D001329 3.4e-26 122.5 277 36.5
Lj1g0015323 Lotus japonicus HOM05D001501 ORTHO05D001329 3.4e-26 122.5 278 34.9
Duzib093G2253 Durio zibethinus HOM05D001501 ORTHO05D001329 9.9e-26 120.9 260 36.5
MBI14_g25894_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 9.9e-26 120.9 220 42.3
FvH4_6g15581 Fragaria vesca HOM05D001501 ORTHO05D001329 1.7e-25 120.2 271 36.9
Phvul.001G175800 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 1.7e-25 120.2 263 35.0
FAN09G4357 Fragaria x ananassa HOM05D001501 ORTHO05D001329 2.9e-25 119.4 273 37.4
FAN14G1218 Fragaria x ananassa HOM05D000190 ORTHO05D000113 1.1e-24 117.5 269 36.4
Psat3g044560 Pisum sativum HOM05D001501 ORTHO05D001329 2.4e-24 116.3 280 31.1
DCAR_014976 Daucus carota HOM05D001501 ORTHO05D001329 4.2e-24 115.5 234 36.3
FAN02G3557 Fragaria x ananassa HOM05D001501 ORTHO05D001329 4.2e-24 115.5 274 35.4
DCAR_017714 Daucus carota HOM05D001501 ORTHO05D001329 5.4e-24 115.2 272 35.3
FAN05G1796 Fragaria x ananassa HOM05D000190 ORTHO05D001329 5.4e-24 115.2 267 36.7
CiPaw.10G134900 Carya illinoinensis HOM05D001501 ORTHO05D001329 9.3e-24 114.4 275 34.5
MSTRG.26715 Avicennia marina HOM05D001501 ORTHO05D001329 1.6e-23 113.6 236 38.6
Gohir.A09G151100 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.6e-23 113.6 261 34.9
Nn2g10728 Nelumbo nucifera HOM05D001501 ORTHO05D001329 7.8e-23 111.3 303 33.3
MELO3C009330.2 Cucumis melo HOM05D001501 ORTHO05D001329 3.0e-22 109.4 241 34.4
TAR636G0711 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.9e-22 109.0 166 44.0
ClCG10G020410 Citrullus lanatus HOM05D001501 ORTHO05D001329 5.1e-22 108.6 240 33.3
EL10Ac7g16526 Beta vulgaris HOM05D001501 ORTHO05D001329 6.6e-22 108.2 248 32.7
Haze_20622 Corylus avellana HOM05D001501 ORTHO05D001329 1.1e-21 107.5 234 37.2
vmacro20046 Vaccinium macrocarpon HOM05D001501 ORTHO05D001329 1.3e-20 104.0 262 30.9
CsaV3_3G035700 Cucumis sativus L. HOM05D001501 ORTHO05D001329 1.6e-20 103.6 236 33.5
Gohir.A09G151150 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.6e-20 103.6 242 33.9
CSS0013234 Camellia sinensis var. sinensis HOM05D001501 ORTHO05D001329 2.1e-20 103.2 168 43.5
Sed0013904 Sechium edule HOM05D001501 ORTHO05D001329 2.8e-20 102.8 225 35.1
TWI74G0251 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 1.1e-19 100.9 192 37.0
PSO384G3594 Papaver somniferum HOM05D001501 ORTHO05D001329 2.4e-19 99.8 280 31.8
SalBow5G0168 Salvia bowleyana HOM05D001501 ORTHO05D001329 3.1e-19 99.4 206 35.9
SalBow5G1382 Salvia bowleyana HOM05D001501 ORTHO05D001329 3.1e-19 99.4 206 35.9
CDE09G0474 Ceratophyllum demersum HOM05D001501 ORTHO05D001329 5.3e-19 98.6 207 37.2
COL.COLO4_27056 Corchorus olitorius HOM05D001501 ORTHO05D001329 5.3e-19 98.6 150 40.0
PSO339G3537 Papaver somniferum HOM05D001501 ORTHO05D001329 3.4e-18 95.9 287 30.7
SGA_v2.0_scaffold452G51849 Striga asiatica HOM05D001501 ORTHO05D001329 3.4e-18 95.9 240 35.8
Ciclev10013612m.g Citrus clementina HOM05D001501 ORTHO05D001329 5.8e-18 95.1 163 40.5
CDE07G2074 Ceratophyllum demersum HOM05D001501 ORTHO05D001329 7.6e-18 94.7 223 35.4
Thecc.05G056600 Theobroma cacao HOM05D001501 ORTHO05D001329 4.9e-17 92.0 183 38.8
ATR0759G121 Amborella trichopoda HOM05D001501 ORTHO05D001329 6.0e-15 85.1 242 31.8
Sc20g0005140 Simmondsia chinensis HOM05D001501 ORTHO05D001329 6.7e-14 81.6 177 37.3
MBI14_g37137_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 1.9e-13 80.1 227 34.8
Atru.chr8.1890 Acer truncatum HOM05D001501 ORTHO05D001329 3.3e-13 79.3 185 36.2
Ah.08g211870 Amaranthus hybridus HOM05D001501 ORTHO05D001329 5.6e-13 78.6 278 27.3
AagrBONN_evm.TU.Sc2ySwM_340.359 Anthoceros agrestis HOM05D001501 ORTHO05D001329 2.0e-10 70.1 116 39.7
TAR626G1129 Trochodendron aralioides HOM05D001501 ORTHO05D001329 7.6e-10 68.2 122 36.1
ATR0012G043 Amborella trichopoda HOM05D001501 ORTHO05D001329 9.9e-10 67.8 164 28.7
Nn1g04509 Nelumbo nucifera HOM05D001501 ORTHO05D001329 2.2e-09 66.6 115 35.7
MBI07_g38899_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 2.9e-09 66.2 143 35.7
MBI07_g01326_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 3.8e-09 65.9 196 30.6
arahy.Tifrunner.gnm1.ann1.14Q3ET Arachis hypogaea HOM05D001501 ORTHO05D001329 8.4e-09 64.7 107 38.3
arahy.Tifrunner.gnm1.ann1.B8RZEA Arachis hypogaea HOM05D001501 ORTHO05D001329 8.4e-09 64.7 107 38.3
SMO165G0039 Selaginella moellendorffii HOM05D001501 ORTHO05D001329 1.9e-08 63.5 103 36.9
Phvul.005G093900 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 3.2e-08 62.8 119 33.6
MBI06_g36539_MAGBIO Magnolia biondii HOM05D001501 ORTHO05D001329 4.2e-08 62.4 130 31.5
Thecc.02G212700 Theobroma cacao HOM05D001501 ORTHO05D001329 4.2e-08 62.4 109 34.9
VMungo1080G0601 Vigna mungo HOM05D001501 ORTHO05D001329 5.5e-08 62.0 119 33.6
Nn1g04269 Nelumbo nucifera HOM05D001501 ORTHO05D001329 7.1e-08 61.6 135 32.6
Actinidia39519 Actinidia chinensis HOM05D001501 ORTHO05D001329 9.3e-08 61.2 121 31.4
Potri.004G059900 Populus trichocarpa HOM05D001501 ORTHO05D001329 1.2e-07 60.8 128 33.6
Dinv12367 Davidia involucrata HOM05D001501 ORTHO05D001329 1.6e-07 60.5 130 31.5
Oeu042465.1 Olea europaea HOM05D001501 ORTHO05D001329 2.1e-07 60.1 134 33.6
Phvul.011G127600 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 2.1e-07 60.1 231 27.3
Atru.chr6.2761 Acer truncatum HOM05D001501 ORTHO05D001329 2.7e-07 59.7 184 29.9
Glyma.15G085500 Glycine max HOM05D001501 ORTHO05D001329 2.7e-07 59.7 137 30.7
Peaxi162Scf00371g00510 Petunia axillaris HOM05D001501 ORTHO05D001329 2.7e-07 59.7 109 38.5
Psat5g250680 Pisum sativum HOM05D001501 ORTHO05D001329 2.7e-07 59.7 202 31.2
GSVIVG01020749001 Vitis vinifera HOM05D001501 ORTHO05D001329 2.7e-07 59.7 108 35.2
Eucgr.L00733 Eucalyptus grandis HOM05D001501 ORTHO05D001329 3.5e-07 59.3 243 27.6
Lalb_Chr12g0205011 Lupinus albus HOM05D001501 ORTHO05D001329 3.5e-07 59.3 234 26.1
Manes.16G042211 Manihot esculenta HOM05D001501 ORTHO05D001329 3.5e-07 59.3 127 33.9
Nn3g21114 Nelumbo nucifera HOM05D001501 ORTHO05D001329 3.5e-07 59.3 126 34.1
PSO170G2694 Papaver somniferum HOM05D001501 ORTHO05D001329 3.5e-07 59.3 228 27.2
Psat1g195160 Pisum sativum HOM05D001501 ORTHO05D001329 3.5e-07 59.3 119 31.9
TAR627G0009 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.5e-07 59.3 220 24.5
TAR627G0776 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.5e-07 59.3 220 24.5
CDE02G3304 Ceratophyllum demersum HOM05D001501 ORTHO05D001329 4.6e-07 58.9 182 28.0
Glyma.12G212200 Glycine max HOM05D001501 ORTHO05D001329 4.6e-07 58.9 114 33.3
Lalb_Chr07g0186361 Lupinus albus HOM05D001501 ORTHO05D001329 4.6e-07 58.9 241 26.1
Manes.17G058500 Manihot esculenta HOM05D001501 ORTHO05D001329 4.6e-07 58.9 127 32.3
Ca_03840_v3 Cicer arietinum L. HOM05D001501 ORTHO05D001329 6.0e-07 58.5 146 29.5
MELO3C007202.2 Cucumis melo HOM05D001501 ORTHO05D001329 6.0e-07 58.5 217 27.6
Dinv12368 Davidia involucrata HOM05D001501 ORTHO05D001329 6.0e-07 58.5 131 32.1
SEGI_36018 Sequoiadendron giganteum HOM05D001501 ORTHO05D001329 6.0e-07 58.5 112 30.4
Gorai.010G160700 Gossypium raimondii HOM05D001501 ORTHO05D001329 7.9e-07 58.2 231 29.4
Potri.011G069900 Populus trichocarpa HOM05D001501 ORTHO05D001329 7.9e-07 58.2 111 32.4
Sabra04G0038700 Salix brachista HOM05D001501 ORTHO05D001329 7.9e-07 58.2 174 31.0
SalBow5G4913 Salvia bowleyana HOM05D001501 ORTHO05D001329 7.9e-07 58.2 88 38.6
TPR.G4514 Trifolium pratense HOM05D001501 ORTHO05D001329 7.9e-07 58.2 106 34.0
Glyma.05G160500 Glycine max HOM05D001501 ORTHO05D001329 1.0e-06 57.8 115 32.2
Medtr8g086820 Medicago truncatula HOM05D001501 ORTHO05D001329 1.0e-06 57.8 176 26.1
Glyma.13G289500 Glycine max HOM05D001501 ORTHO05D001329 1.3e-06 57.4 118 32.2
MD05G1296400 Malus domestica HOM05D001501 ORTHO05D001329 1.3e-06 57.4 117 31.6
Medtr2g016760 Medicago truncatula HOM05D001501 ORTHO05D001329 1.3e-06 57.4 105 33.3
Phvul.002G240700 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 1.3e-06 57.4 129 31.0
Thecc.06G166500 Theobroma cacao HOM05D001501 ORTHO05D001329 1.3e-06 57.4 126 31.7
Gohir.D06G138300 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.8e-06 57.0 234 29.1
CiPaw.09G072400 Carya illinoinensis HOM05D001501 ORTHO05D001329 2.3e-06 56.6 112 31.2
Glyma.13G226900 Glycine max HOM05D001501 ORTHO05D001329 2.3e-06 56.6 117 30.8
Sabra11G0054000 Salix brachista HOM05D001501 ORTHO05D001329 2.3e-06 56.6 111 34.2
Sabra11G0057500 Salix brachista HOM05D001501 ORTHO05D001329 2.3e-06 56.6 111 34.2
Duzib192G0322 Durio zibethinus HOM05D001501 ORTHO05D001329 3.0e-06 56.2 132 34.8
FvH4_5g20610 Fragaria vesca HOM05D001501 ORTHO05D001329 3.0e-06 56.2 124 33.9
VMungo0540G0954 Vigna mungo HOM05D001501 ORTHO05D001329 3.0e-06 56.2 116 31.0
Ca_17901_v3 Cicer arietinum L. HOM05D001501 ORTHO05D001329 3.9e-06 55.8 108 33.3
FAN18G4527 Fragaria x ananassa HOM05D001501 ORTHO05D001329 3.9e-06 55.8 124 35.5
MD10G1276400 Malus domestica HOM05D001501 ORTHO05D001329 5.1e-06 55.5 106 32.1
AUR62027712 Chenopodium quinoa HOM05D001501 ORTHO05D001329 6.7e-06 55.1 101 36.6
CAN.G411.56 Capsicum annuum HOM05D001501 ORTHO05D001329 8.7e-06 54.7 223 26.9
Cpa.g.sc52.155 Carica papaya HOM05D001501 ORTHO05D001329 8.7e-06 54.7 115 33.9


User provided reference genes

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