Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.0e-124 449.1 234 100.0
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.4e-101 373.2 218 91.7
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.1e-93 347.1 214 86.9
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 2.4e-93 345.9 214 86.0
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 7.8e-92 340.9 214 85.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.8e-89 332.4 214 83.6
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.4e-77 292.7 214 73.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 3.9e-75 285.4 219 71.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.1e-74 283.9 219 70.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.5e-74 282.7 218 69.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 4.3e-74 282.0 214 71.0
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 7.4e-74 281.2 220 69.1
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 7.4e-74 281.2 222 67.6
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 9.6e-74 280.8 214 72.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.1e-73 279.6 220 72.7
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.8e-73 279.3 216 70.4
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.4e-72 276.9 222 67.1
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 3.1e-72 275.8 150 94.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.3e-72 275.0 218 70.6
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.5e-71 273.5 215 71.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.6e-71 272.7 215 70.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.6e-71 272.7 234 65.4
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 3.4e-71 272.3 214 68.7
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.4e-71 272.3 218 70.6
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 5.8e-71 271.6 219 69.9
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 7.6e-71 271.2 214 65.4
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.7e-70 270.0 220 68.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 2.2e-70 269.6 216 68.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 2.2e-70 269.6 216 68.1
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.2e-70 269.6 216 69.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.8e-70 268.9 215 68.8
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.9e-69 266.5 215 70.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-68 263.8 214 64.0
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.6e-68 263.5 190 72.6
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.6e-68 263.5 214 68.2
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 4.6e-68 261.9 222 64.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-67 260.4 221 66.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.3e-67 260.4 216 65.3
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.8e-67 260.0 155 83.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.1e-66 257.3 236 62.7
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.1e-66 257.3 215 64.7
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.9e-66 256.5 217 66.4
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 3.3e-66 255.8 232 62.1
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.3e-66 255.4 218 66.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 5.6e-66 255.0 214 66.4
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.6e-65 253.4 150 84.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.6e-65 253.4 222 63.1
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.6e-65 253.4 150 84.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 2.8e-65 252.7 219 63.0
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.7e-65 252.3 219 65.3
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.4e-64 250.4 218 65.1
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.4e-64 249.6 214 66.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.0e-64 248.8 195 66.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 5.3e-64 248.4 221 62.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 6.9e-64 248.1 215 63.3
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 6.9e-64 248.1 250 58.8
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 6.9e-64 248.1 216 62.0
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.2e-63 247.3 214 65.9
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 2.0e-63 246.5 216 62.5
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 5.8e-63 245.0 214 63.6
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 7.6e-63 244.6 152 78.9
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.0e-62 244.2 204 67.2
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 4.9e-62 241.9 221 61.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.5e-62 241.5 136 86.0
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 6.5e-62 241.5 214 61.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.4e-61 240.4 215 61.9
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.4e-61 240.4 214 62.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 7.1e-61 238.0 222 60.4
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 3.5e-60 235.7 197 69.5
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.6e-60 235.3 214 61.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.0e-59 234.2 147 78.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.0e-59 234.2 214 60.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 5.1e-59 231.9 214 61.2
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 8.7e-59 231.1 217 60.4
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.1e-58 230.7 197 64.0
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.5e-58 230.3 197 61.4
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.9e-58 229.9 217 62.2
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.9e-58 229.9 196 68.4
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.5e-58 229.6 219 61.2
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 7.4e-58 228.0 153 73.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.6e-58 227.6 151 77.5
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.1e-56 224.2 222 61.7
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.2e-55 220.7 214 55.6
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.5e-55 220.3 221 57.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.0e-55 219.9 128 82.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 5.9e-55 218.4 199 59.8
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 5.9e-55 218.4 199 59.8
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.0e-54 217.6 216 57.4
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.2e-54 216.5 203 59.6
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 2.2e-54 216.5 222 56.3
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.6e-52 210.3 215 56.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.1e-52 209.9 221 57.0
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.7e-52 209.5 174 64.4
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.9e-51 205.7 151 65.6
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.7e-51 204.9 230 51.7
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.5e-50 203.8 235 52.3
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 3.3e-50 202.6 151 62.3
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.3e-49 200.7 158 59.5
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.0e-47 193.4 108 88.0
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 3.4e-47 192.6 173 64.7
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 2.2e-46 189.9 109 83.5
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.5e-45 186.4 145 63.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.7e-42 174.5 110 80.0
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 5.9e-39 165.2 152 63.8
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-35 154.5 153 62.7
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.4e-34 149.1 159 56.0
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 7.4e-34 148.3 149 58.4
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 4.8e-33 145.6 161 55.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 7.0e-32 141.7 159 52.8
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.1e-29 134.4 72 86.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 5.7e-26 122.1 180 40.0
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.8e-22 109.4 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.8e-22 109.4 68 75.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.4e-18 96.3 104 53.8
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.1e-16 89.4 58 72.4
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.0e-15 87.0 52 84.6


User provided reference genes

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