Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008542g0030 Nicotiana tabacum HOM05D004417 ORTHO05D005528 1.9e-295 1018.5 520 100.0
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 1.9e-276 955.3 512 95.3
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 8.0e-254 880.2 501 89.6
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 3.3e-252 874.8 501 89.2
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 7.2e-239 830.5 503 82.3
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 4.4e-236 821.2 501 81.2
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 3.5e-233 811.6 503 80.5
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 2.9e-232 808.5 501 79.8
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 3.6e-230 801.6 495 81.2
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 1.4e-229 799.7 500 80.8
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 1.2e-228 796.6 500 79.8
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 1.3e-227 793.1 500 79.0
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 3.7e-227 791.6 503 77.5
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 8.3e-227 790.4 507 79.1
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 1.4e-226 789.6 500 78.4
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 1.6e-225 786.2 500 78.0
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 7.8e-225 783.9 498 78.3
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 1.0e-224 783.5 500 77.6
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 2.3e-224 782.3 503 77.3
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 2.9e-224 781.9 501 80.2
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 3.9e-224 781.6 509 77.0
Gohir.A03G118100 Gossypium hirsutum HOM05D004417 ORTHO05D005528 9.5e-223 776.9 503 76.1
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 1.8e-221 772.7 503 75.5
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 2.3e-221 772.3 500 78.0
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 1.5e-220 769.6 515 74.2
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 2.0e-220 769.2 503 75.5
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 1.3e-219 766.5 500 76.0
VMungo1215G0458 Vigna mungo HOM05D004417 ORTHO05D005528 1.7e-219 766.1 505 74.7
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 2.2e-219 765.8 515 75.1
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 4.9e-219 764.6 498 77.1
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 2.4e-218 762.3 501 75.6
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 3.2e-218 761.9 515 73.4
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 3.2e-218 761.9 515 73.4
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 4.1e-218 761.5 505 74.5
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 5.4e-218 761.1 515 73.2
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 7.0e-218 760.8 499 76.8
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 1.2e-217 760.0 500 75.4
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 2.0e-217 759.2 498 75.3
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 1.0e-216 756.9 505 73.5
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 3.9e-216 755.0 500 74.8
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 3.9e-216 755.0 500 74.6
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 1.5e-215 753.1 498 75.5
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 1.9e-215 752.7 500 74.6
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 4.3e-215 751.5 463 81.9
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 7.3e-215 750.7 500 74.0
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 2.1e-214 749.2 503 72.6
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 1.4e-213 746.5 501 77.8
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 8.9e-213 743.8 498 74.7
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 1.2e-212 743.4 500 74.2
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 2.4e-210 735.7 500 74.2
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 2.4e-210 735.7 495 74.1
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 4.1e-210 734.9 503 71.6
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea HOM05D004417 ORTHO05D005528 7.1e-210 734.2 500 73.6
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 1.2e-209 733.4 503 71.8
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 1.7e-208 729.6 503 72.2
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 3.0e-208 728.8 500 73.8
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 3.9e-208 728.4 503 71.0
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 3.3e-207 725.3 500 72.6
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 3.3e-207 725.3 503 70.2
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 7.3e-207 724.2 503 73.0
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 9.5e-207 723.8 497 71.6
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 1.6e-206 723.0 504 71.4
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 1.6e-206 723.0 503 71.8
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 2.1e-206 722.6 500 71.4
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 2.1e-206 722.6 497 71.2
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 6.2e-206 721.1 506 70.8
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 6.2e-206 721.1 500 71.6
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 6.2e-206 721.1 503 73.2
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 1.1e-205 720.3 503 70.4
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 1.4e-205 719.9 503 71.8
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 1.4e-205 719.9 500 71.4
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 3.1e-205 718.8 506 70.8
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 4.0e-205 718.4 506 70.6
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 4.0e-205 718.4 505 70.5
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 5.2e-205 718.0 506 70.6
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 6.8e-205 717.6 505 70.5
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 6.8e-205 717.6 506 70.6
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 1.5e-204 716.5 498 71.3
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 3.4e-204 715.3 504 70.4
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 5.8e-204 714.5 502 70.3
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 7.6e-204 714.1 496 73.6
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 4.1e-202 708.4 501 72.7
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 1.7e-200 703.0 511 69.5
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 9.6e-199 697.2 507 68.4
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 3.6e-198 695.3 672 57.0
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 1.7e-195 686.4 500 69.8
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 3.8e-195 685.3 489 71.8
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 1.4e-194 683.3 468 74.8
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 3.0e-192 675.6 499 68.9
BcaB07g32312 Brassica carinata HOM05D004417 ORTHO05D005528 3.3e-191 672.2 475 70.5
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 1.4e-189 666.8 504 69.4
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 1.8e-189 666.4 504 69.4
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 5.4e-186 654.8 407 80.6
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 7.3e-183 644.4 501 66.9
unitig_899.g15633 Utricularia gibba HOM05D004417 ORTHO05D005528 1.3e-182 643.7 494 66.8
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 1.7e-179 633.3 514 64.0
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 2.3e-176 622.9 343 93.0
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 2.4e-173 612.8 406 76.8
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 3.4e-172 609.0 499 64.3
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 1.9e-167 593.2 411 71.8
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 9.0e-165 584.3 501 60.3
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 4.2e-154 548.9 507 60.0
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 1.1e-149 534.3 511 57.1
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 5.0e-147 525.4 339 77.3
Haze_10916 Corylus avellana HOM05D004417 ORTHO05D005528 1.1e-146 524.2 361 73.7
Cpa.g.sc2.214 Carica papaya HOM05D004417 ORTHO05D005528 7.7e-140 501.5 325 76.6
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 1.6e-137 493.8 489 55.0
Actinidia25662 Actinidia chinensis HOM05D004417 ORTHO05D005528 1.6e-129 467.2 291 81.4
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 7.5e-127 458.4 453 55.4
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 5.5e-122 442.2 504 49.2
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 1.4e-120 437.6 505 49.3
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 1.4e-117 427.6 497 49.7
SEGI_15839 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.2e-116 424.5 371 59.3
SHI04465 Sapria himalayana HOM05D004417 ORTHO05D005528 7.3e-98 362.1 351 56.4
SEGI_38026 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 4.7e-97 359.4 365 53.2
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 4.4e-95 352.8 257 72.0
Peaxi162Scf00376g00324 Petunia axillaris HOM05D004417 ORTHO05D005528 5.6e-82 309.3 163 94.5
Psat2g053360 Pisum sativum HOM05D004417 ORTHO05D005528 5.6e-74 282.7 213 66.7
CiPaw.05G190600 Carya illinoinensis HOM05D004417 ORTHO05D005528 1.2e-71 275.0 159 84.3
Potri.010G108350 Populus trichocarpa HOM05D004417 ORTHO05D005528 7.4e-58 229.2 142 78.9
SEGI_21450 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.5e-50 204.9 212 53.8
Actinidia25661 Actinidia chinensis HOM05D004417 ORTHO05D005528 1.3e-46 191.8 104 85.6
CAN.G45.12 Capsicum annuum HOM05D004417 ORTHO05D005528 5.1e-43 179.9 98 87.8
Haze_10915 Corylus avellana HOM05D004417 ORTHO05D005528 2.0e-39 167.9 100 80.0
Hund24935 Selenicereus undatus HOM05D008000 ORTHO05D010275 2.1e-36 157.9 101 74.3
QL03p034878 Quercus lobata HOM05D004417 ORTHO05D005528 4.6e-36 156.8 92 80.4
Sopen03g014530 Solanum pennellii HOM05D004417 ORTHO05D005528 7.4e-34 149.4 91 83.5
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 2.0e-26 124.8 99 57.6
HPP92_024820 Vanilla planifolia HOM05D004417 ORTHO05D005528 3.8e-22 110.5 107 57.0
HPP92_024819 Vanilla planifolia HOM05D004417 ORTHO05D005528 7.0e-16 89.7 82 58.5
Lsat_1_v5_gn_1_113260 Lactuca sativa HOM05D005112 ORTHO05D006681 1.6e-12 78.6 56 62.5
TWI77G0048 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 4.7e-12 77.0 50 70.0
Lsat_1_v5_gn_4_130540 Lactuca sativa HOM05D005112 ORTHO05D006681 1.8e-11 75.1 54 63.0
Migut.L00545 Erythranthe guttata HOM05D004417 ORTHO05D005528 1.2e-10 72.4 50 64.0


User provided reference genes

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