Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 3.8e-36 155.2 132 100.0
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 3.1e-25 119.0 83 81.9
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 8.9e-25 117.5 83 77.1
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 2.6e-24 115.9 83 75.9
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 2.9e-15 85.9 83 54.2
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 5.4e-14 81.6 88 56.8
Solyc07g007500.3 Solanum lycopersicum HOM05D013625 ORTHO05D007516 7.8e-13 77.8 101 49.5
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 7.8e-13 77.8 101 49.5
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 1.0e-12 77.4 101 48.5
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 8.6e-12 74.3 83 50.6
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 1.1e-11 73.9 83 45.8
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 2.5e-11 72.8 69 55.1
Peaxi162Scf00088g00076 Petunia axillaris HOM05D013625 ORTHO05D007516 2.5e-11 72.8 80 53.8
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 7.3e-11 71.2 83 47.0
Peaxi162Scf01694g00020 Petunia axillaris HOM05D013625 ORTHO05D007516 9.5e-11 70.9 63 69.8
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 1.1e-09 67.4 84 47.6
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 2.4e-09 66.2 84 53.6
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 2.0e-08 63.2 83 45.8
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 2.6e-08 62.8 83 44.6
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.4e-08 62.4 64 53.1
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.9e-08 60.8 83 43.4
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 1.3e-07 60.5 64 53.1
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 1.3e-07 60.5 83 45.8
Nitab4.5_0000704g0140 Nicotiana tabacum HOM05D013625 ORTHO05D025947 1.3e-07 60.5 77 50.6
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.9e-07 59.3 83 42.2
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.8e-07 58.9 64 51.6
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 4.9e-07 58.5 64 50.0
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 4.9e-07 58.5 84 44.0
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 4.9e-07 58.5 64 50.0
ECA234G1017 Erigeron canadensis HOM05D021640 ORTHO05D007516 6.4e-07 58.2 56 55.4
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 6.4e-07 58.2 64 48.4
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 8.4e-07 57.8 68 50.0
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 1.1e-06 57.4 68 48.5
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.1e-06 57.4 64 48.4
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 1.1e-06 57.4 64 50.0
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 1.1e-06 57.4 64 46.9
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.1e-06 57.4 79 44.3
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 1.4e-06 57.0 81 42.0
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 4.2e-06 55.5 64 46.9
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.2e-06 55.5 64 46.9
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 5.4e-06 55.1 83 41.0
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 5.4e-06 55.1 83 39.8
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 5.4e-06 55.1 64 46.9
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 5.4e-06 55.1 64 46.9
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 5.4e-06 55.1 83 45.8
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 7.1e-06 54.7 64 48.4
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 9.2e-06 54.3 83 45.8


User provided reference genes

Program Settings