Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008522g0050 Nicotiana tabacum HOM05D015841 ORTHO05D019111 0.0e+00 1389.0 696 100.0
Nitab4.5_0012489g0010 Nicotiana tabacum HOM05D015841 ORTHO05D019111 0.0e+00 1238.8 698 90.3
Peaxi162Scf00444g00239 Petunia axillaris HOM05D015841 ORTHO05D019111 7.7e-228 794.3 740 60.9
Sopen03g003820 Solanum pennellii HOM05D015841 ORTHO05D019111 1.0e-227 793.9 783 59.4
Solyc03g007880.3 Solanum lycopersicum HOM05D015841 ORTHO05D019111 6.5e-211 738.0 732 59.2
PGSC0003DMG400009508 Solanum tuberosum HOM05D015841 ORTHO05D019111 3.5e-204 715.7 717 58.9
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 6.5e-17 93.6 925 22.4
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 5.0e-09 67.4 220 27.7
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 1.4e-08 65.9 222 26.1
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 4.6e-07 60.8 373 24.4
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 6.1e-07 60.5 328 25.6
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 6.1e-07 60.5 155 34.2
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 7.9e-07 60.1 199 27.1
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.3e-06 58.5 108 33.3
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 3.9e-06 57.8 206 30.1
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 3.9e-06 57.8 195 29.7
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 3.9e-06 57.8 85 38.8
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 3.9e-06 57.8 194 27.8
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 5.1e-06 57.4 172 27.3
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 5.1e-06 57.4 213 28.2
SGA_v2.0_scaffold60G21115 Striga asiatica HOM05D015841 ORTHO05D019111 5.1e-06 57.4 299 26.8
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 6.7e-06 57.0 220 26.4
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 8.8e-06 56.6 376 26.1
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 8.8e-06 56.6 394 23.4


User provided reference genes

Program Settings