Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.4e-31 138.3 74 100.0
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-26 122.9 71 90.1
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 2.4e-26 121.7 70 90.0
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 2.4e-26 121.7 70 90.0
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.1e-26 121.3 70 90.0
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.9e-26 120.2 70 87.1
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 3.4e-25 117.9 70 85.7
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 7.6e-25 116.7 67 88.1
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.4e-23 111.7 71 76.1
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.4e-23 111.7 71 77.5
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 4.2e-23 110.9 70 81.4
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.7e-22 108.2 70 74.3
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 3.5e-22 107.8 70 78.6
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 4.6e-22 107.5 70 75.7
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 6.0e-22 107.1 70 75.7
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 6.0e-22 107.1 71 77.5
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 6.0e-22 107.1 71 77.5
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 7.8e-22 106.7 70 74.3
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.3e-21 105.9 70 74.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.3e-21 105.9 67 79.1
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 2.3e-21 105.1 70 74.3
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 2.3e-21 105.1 70 75.7
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 3.0e-21 104.8 70 74.3
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 3.9e-21 104.4 70 74.3
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 5.1e-21 104.0 70 74.3
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 6.6e-21 103.6 70 75.7
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 6.6e-21 103.6 71 70.4
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 8.7e-21 103.2 70 74.3
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.5e-20 102.4 67 76.1
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 1.9e-20 102.1 70 74.3
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.9e-20 102.1 70 68.6
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.9e-20 102.1 70 70.0
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.9e-20 102.1 70 71.4
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.9e-20 102.1 70 70.0
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 3.3e-20 101.3 70 70.0
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 4.3e-20 100.9 69 73.9
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 4.3e-20 100.9 70 74.3
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 4.3e-20 100.9 71 67.6
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 5.6e-20 100.5 70 68.6
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 5.6e-20 100.5 70 68.6
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.6e-20 100.5 70 71.4
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 7.3e-20 100.1 67 73.1
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 7.3e-20 100.1 70 71.4
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 7.3e-20 100.1 72 72.2
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 7.3e-20 100.1 70 67.1
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 7.3e-20 100.1 67 76.1
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 7.3e-20 100.1 73 69.9
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 9.6e-20 99.8 67 74.6
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.3e-19 99.4 70 71.4
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.3e-19 99.4 73 67.1
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 1.6e-19 99.0 70 70.0
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.6e-19 99.0 70 71.4
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 1.6e-19 99.0 70 67.1
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 1.6e-19 99.0 67 71.6
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 2.1e-19 98.6 71 67.6
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.1e-19 98.6 70 71.4
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 2.8e-19 98.2 70 71.4
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.8e-19 98.2 70 68.6
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 2.8e-19 98.2 70 65.7
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 3.6e-19 97.8 70 70.0
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 4.8e-19 97.4 70 67.1
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 4.8e-19 97.4 67 70.1
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.8e-19 97.4 70 68.6
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 4.8e-19 97.4 67 70.1
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 6.2e-19 97.1 70 65.7
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 6.2e-19 97.1 69 71.0
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 6.2e-19 97.1 68 70.6
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 67.1
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 70.0
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 70.0
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 67.1
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 70.0
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 68.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 8.1e-19 96.7 70 65.7
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.1e-18 96.3 67 70.1
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.1e-18 96.3 67 68.7
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.1e-18 96.3 70 65.7
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 1.1e-18 96.3 70 65.7
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 1.4e-18 95.9 66 72.7
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.8e-18 95.5 70 67.1
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.8e-18 95.5 70 67.1
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.8e-18 95.5 70 67.1
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 3.1e-18 94.7 70 68.6
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.0e-18 94.4 70 67.1
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.0e-18 94.4 70 67.1
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.3e-18 94.0 70 68.6
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 5.3e-18 94.0 69 63.8
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 6.9e-18 93.6 67 68.7
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 6.9e-18 93.6 71 62.0
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.2e-17 92.8 70 64.3
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 1.5e-17 92.4 70 67.1
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.5e-17 92.4 70 70.0
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 2.0e-17 92.0 67 64.2
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.6e-17 91.7 70 68.6
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.6e-17 91.7 70 68.6
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 3.4e-17 91.3 67 71.6
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.4e-17 91.3 70 68.6
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 7.6e-17 90.1 70 67.1
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 7.6e-17 90.1 66 68.2
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.3e-16 89.4 66 68.2
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 1.3e-16 89.4 67 61.2
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 2.2e-16 88.6 66 66.7
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.2e-16 88.6 65 70.8
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.2e-16 88.6 66 68.2
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 2.9e-16 88.2 70 65.7
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 2.9e-16 88.2 71 64.8
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 3.8e-16 87.8 66 66.7
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 3.8e-16 87.8 65 67.7
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 4.9e-16 87.4 66 66.7
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 4.9e-16 87.4 66 66.7
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 6.4e-16 87.0 67 65.7
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 6.4e-16 87.0 67 59.7
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 8.4e-16 86.7 66 66.7
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.9e-15 85.5 70 62.9
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.9e-15 85.5 56 75.0
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.9e-15 85.5 70 57.1
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 2.4e-15 85.1 66 65.2
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.4e-15 85.1 70 61.4
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.1e-15 83.6 66 65.2
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.8e-13 79.0 70 58.6
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 2.3e-13 78.6 70 60.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.9e-12 75.5 60 61.7
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 4.3e-12 74.3 70 52.9
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 5.6e-12 73.9 70 45.7
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 7.4e-12 73.6 70 52.9
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.6e-12 73.2 54 64.8
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.1e-11 72.0 51 62.7
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 6.2e-11 70.5 67 50.7
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 9.0e-10 66.6 51 62.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 5.8e-09 63.9 70 47.1


User provided reference genes

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