Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-180 635.2 372 100.0
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.5e-65 252.7 377 50.4
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-41 174.5 245 53.9
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.1e-38 164.1 393 45.3
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.2e-31 139.8 143 58.0
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.8e-27 127.1 378 34.9
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.1e-26 123.2 547 29.4
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.7e-24 117.9 266 37.2
Nitab4.5_0011353g0010 Nicotiana tabacum HOM05D004064 ORTHO05D283601 7.2e-23 112.5 99 62.6
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-22 111.7 67 85.1
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-22 111.3 404 31.2
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.0e-22 109.0 380 31.1
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-21 107.8 375 33.1
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.4e-20 103.2 115 55.7
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-18 98.6 273 33.7
Nitab4.5_0003194g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-18 97.8 212 37.7
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 2.4e-18 97.4 295 34.6
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.1e-18 97.1 160 42.5
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 5.9e-17 92.8 164 40.2
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.0e-16 92.0 148 41.9
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.0e-16 92.0 148 41.9
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.0e-16 92.0 148 41.9
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.0e-16 92.0 148 41.9
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.0e-16 89.7 133 44.4
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 8.5e-16 89.0 343 29.2
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.1e-15 88.6 148 41.9
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 1.1e-15 88.6 148 40.5
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-15 88.2 224 34.8
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.5e-15 88.2 157 40.1
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.9e-15 87.8 148 41.2
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.2e-15 86.7 135 44.4
Nitab4.5_0001547g0060 Nicotiana tabacum HOM05D004064 ORTHO05D283174 7.2e-15 85.9 87 56.3
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-14 85.1 56 76.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-14 84.7 100 50.0
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.7e-14 84.0 148 40.5
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 3.6e-14 83.6 289 30.1
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.7e-14 83.2 430 32.8
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-13 81.6 111 48.6
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 1.4e-13 81.6 100 48.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-13 81.6 100 48.0
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-13 80.9 111 45.9
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.0e-13 80.5 110 47.3
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.0e-13 80.5 244 34.8
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.0e-13 80.1 112 47.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 6.7e-13 79.3 255 32.9
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-12 78.6 139 39.6
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.7e-12 75.5 281 30.2
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 1.7e-11 74.7 245 30.6
Nitab4.5_0000498g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-11 74.3 60 73.3
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.2e-11 74.3 288 38.2
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 2.8e-11 73.9 100 44.0
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-10 72.0 56 64.3
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.1e-10 70.1 58 69.0
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 4.1e-10 70.1 261 36.0
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.1e-10 70.1 133 39.8
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.0e-10 69.3 201 37.8
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.6e-09 68.2 62 62.9
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-09 68.2 61 63.9
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.0e-09 67.8 61 63.9
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 3.5e-09 67.0 73 52.1
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-09 65.9 83 42.2
Nitab4.5_0008697g0010 Nicotiana tabacum HOM05D004064 ORTHO05D285435 2.2e-08 64.3 54 68.5
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.2e-08 64.3 96 42.7
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-08 63.5 80 42.5
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-08 63.5 80 42.5
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-08 63.5 80 42.5
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 5.0e-08 63.2 109 34.9
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 5.0e-08 63.2 82 40.2
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 6.5e-08 62.8 70 51.4
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.5e-08 62.8 204 34.8
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.5e-08 62.8 222 33.8
Nitab4.5_0009324g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009561 8.5e-08 62.4 54 64.8
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 8.5e-08 62.4 83 43.4
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-08 62.4 80 42.5
Nitab4.5_0000062g0040 Nicotiana tabacum HOM05D004064 ORTHO05D284748 2.5e-07 60.8 66 63.6
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 2.5e-07 60.8 80 41.2
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.5e-07 60.8 136 38.2
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.5e-07 60.8 57 56.1
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 3.2e-07 60.5 80 41.2
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 4.2e-07 60.1 76 43.4
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 4.2e-07 60.1 82 41.5
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.2e-07 60.1 104 36.5
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 5.5e-07 59.7 72 43.1
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 5.5e-07 59.7 197 31.5
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 5.5e-07 59.7 80 41.2
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-07 59.7 80 41.2
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 7.2e-07 59.3 92 35.9
CAN.G293.7 Capsicum annuum HOM05D004064 ORTHO05D009561 9.4e-07 58.9 55 56.4
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 9.4e-07 58.9 69 56.5
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 9.4e-07 58.9 92 35.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 9.4e-07 58.9 52 57.7
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 9.4e-07 58.9 68 47.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 9.4e-07 58.9 52 57.7
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.2e-06 58.5 70 48.6
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-06 58.5 52 63.5
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.2e-06 58.5 144 33.3
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-06 58.5 80 40.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 58.5 52 57.7
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.2e-06 58.5 80 40.0
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-06 58.2 52 55.8
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 2.1e-06 57.8 97 37.1
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 2.1e-06 57.8 110 35.5
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 2.7e-06 57.4 78 39.7
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.7e-06 57.4 107 35.5
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.7e-06 56.6 202 33.2
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 6.1e-06 56.2 94 34.0
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 8.0e-06 55.8 55 50.9
Peaxi162Scf00385g00076 Petunia axillaris HOM05D004064 ORTHO05D009561 8.0e-06 55.8 55 49.1
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 8.0e-06 55.8 239 27.6
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 8.0e-06 55.8 80 40.0
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 8.0e-06 55.8 81 39.5


User provided reference genes

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