Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.7e-73 279.3 141 100.0
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 7.8e-63 243.8 196 68.4
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 4.9e-49 198.0 184 61.4
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 2.1e-47 192.6 178 61.2
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 4.6e-47 191.4 178 60.7
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 1.0e-46 190.3 190 58.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 3.2e-40 168.7 172 59.3
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 2.9e-33 145.6 94 73.4
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 3.2e-32 142.1 133 57.9
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 3.2e-32 142.1 90 76.7
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 9.3e-32 140.6 136 55.1
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.2e-31 140.2 90 75.6
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 1.2e-31 140.2 113 64.6
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 1.6e-31 139.8 98 70.4
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.6e-31 139.8 84 79.8
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 2.7e-31 139.0 117 63.2
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 2.7e-31 139.0 100 67.0
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.7e-31 139.0 87 77.0
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 6.1e-31 137.9 90 74.4
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 6.1e-31 137.9 95 68.4
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 7.9e-31 137.5 130 56.9
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 1.0e-30 137.1 85 75.3
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.3e-30 136.7 74 83.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.3e-30 136.7 83 77.1
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.8e-30 136.3 134 57.5
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 2.3e-30 136.0 86 75.6
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 5.1e-30 134.8 68 88.2
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 6.7e-30 134.4 86 73.3
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 8.7e-30 134.0 102 62.7
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.1e-29 133.7 135 56.3
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.5e-29 133.3 86 73.3
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.5e-29 133.3 69 82.6
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 1.5e-29 133.3 119 58.8
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 2.5e-29 132.5 84 75.0
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 3.3e-29 132.1 65 87.7
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 3.3e-29 132.1 90 72.2
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.3e-29 132.1 91 70.3
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 4.3e-29 131.7 84 75.0
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 4.3e-29 131.7 87 75.9
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.3e-29 131.7 71 85.9
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 5.7e-29 131.3 72 83.3
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 5.7e-29 131.3 88 72.7
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 5.7e-29 131.3 91 68.1
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 7.4e-29 131.0 90 71.1
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 7.4e-29 131.0 90 70.0
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 9.7e-29 130.6 90 70.0
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 3.7e-28 128.6 86 72.1
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 3.7e-28 128.6 90 68.9
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 4.8e-28 128.3 65 84.6
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 4.8e-28 128.3 82 70.7
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 4.8e-28 128.3 65 84.6
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 6.3e-28 127.9 90 74.4
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 8.2e-28 127.5 93 64.5
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 8.2e-28 127.5 69 82.6
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.1e-27 127.1 63 85.7
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 1.1e-27 127.1 83 69.9
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.4e-27 126.7 102 62.7
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 1.8e-27 126.3 96 67.7
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.8e-27 126.3 87 70.1
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.8e-27 126.3 63 85.7
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 2.4e-27 125.9 162 48.1
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 2.4e-27 125.9 68 79.4
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 2.4e-27 125.9 72 75.0
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 2.4e-27 125.9 85 70.6
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 2.4e-27 125.9 92 67.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 4.1e-27 125.2 81 72.8
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 4.1e-27 125.2 138 50.0
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 5.3e-27 124.8 94 67.0
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 5.3e-27 124.8 117 59.0
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 6.9e-27 124.4 124 51.6
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 9.1e-27 124.0 81 72.8
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 9.1e-27 124.0 69 76.8
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.2e-26 123.6 90 66.7
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 1.5e-26 123.2 67 79.1
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 2.6e-26 122.5 125 52.0
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 3.4e-26 122.1 89 66.3
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 3.4e-26 122.1 73 75.3
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.4e-26 122.1 73 75.3
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 3.4e-26 122.1 73 75.3
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 3.4e-26 122.1 94 66.0
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 5.9e-26 121.3 87 66.7
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 5.9e-26 121.3 78 69.2
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 5.9e-26 121.3 90 63.3
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 7.7e-26 120.9 73 74.0
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 1.0e-25 120.6 93 59.1
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.3e-25 120.2 93 60.2
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.3e-25 120.2 93 60.2
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.3e-25 120.2 93 60.2
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 1.3e-25 120.2 77 70.1
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 2.9e-25 119.0 65 76.9
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.9e-25 119.0 65 76.9
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 2.9e-25 119.0 65 76.9
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.8e-25 118.6 65 76.9
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.8e-25 118.6 65 76.9
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 8.5e-25 117.5 91 64.8
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.4e-24 116.7 67 74.6
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 3.2e-24 115.5 87 59.8
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 5.5e-24 114.8 87 59.8
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 7.2e-24 114.4 65 75.4
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 3.6e-23 112.1 63 74.6
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 1.8e-22 109.8 90 58.9
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 5.1e-22 108.2 63 71.4
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 9.7e-21 104.0 51 84.3
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 1.8e-19 99.8 63 69.8
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.5e-13 80.1 66 51.5
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 1.1e-11 73.9 86 40.7
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 3.6e-07 58.9 57 47.4


User provided reference genes

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