Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 1.4e-182 642.9 337 100.0
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 7.4e-160 567.4 337 90.5
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 5.0e-140 501.5 340 80.9
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.2e-127 459.5 341 75.1
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 2.0e-117 426.4 341 71.6
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 9.2e-102 374.4 308 66.9
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 2.5e-54 216.9 335 46.9
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 6.0e-53 212.2 333 48.0
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 7.9e-53 211.8 333 47.7
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 3.0e-52 209.9 341 48.7
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.5e-48 197.6 340 47.6
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 1.3e-47 194.5 326 45.7
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 1.4e-46 191.0 332 43.1
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 1.9e-46 190.7 333 43.2
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 7.2e-46 188.7 293 48.8
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 2.7e-45 186.8 322 45.7
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.7e-45 186.8 322 45.7
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.7e-45 186.8 322 45.7
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 2.7e-45 186.8 334 44.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 4.6e-45 186.0 330 43.3
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 7.9e-45 185.3 338 44.1
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 1.8e-44 184.1 329 43.5
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.3e-43 179.5 322 44.7
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 1.6e-42 177.6 342 43.3
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 2.8e-42 176.8 334 39.2
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 8.2e-42 175.3 326 45.1
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.8e-41 174.1 277 45.5
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 5.9e-40 169.1 322 40.1
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 1.1e-38 164.9 341 43.1
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 2.5e-38 163.7 301 45.2
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 4.2e-38 162.9 334 43.7
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 7.2e-38 162.2 333 39.6
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.7e-37 160.2 329 42.6
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 2.3e-36 157.1 327 42.5
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.0e-36 156.8 278 45.7
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 5.1e-36 156.0 328 39.9
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.5e-35 154.5 332 36.1
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 7.4e-35 152.1 272 44.9
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 1.7e-34 151.0 276 45.3
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 2.8e-34 150.2 322 40.7
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 5.0e-31 139.4 270 47.0
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 6.1e-29 132.5 325 39.1
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 3.9e-28 129.8 336 37.5
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.1e-27 128.3 282 37.6
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 1.5e-27 127.9 281 41.3
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 3.3e-27 126.7 287 39.7
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 3.3e-27 126.7 283 38.9
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 4.8e-26 122.9 328 38.4
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 2.4e-25 120.6 268 36.9
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.2e-24 118.2 321 40.8
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 7.7e-24 115.5 330 37.3
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 1.0e-23 115.2 335 35.2
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.9e-23 113.6 351 32.2
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 3.8e-23 113.2 292 42.5
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.8e-23 113.2 316 37.3
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 6.5e-23 112.5 336 38.1
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 1.5e-22 111.3 335 36.4
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 1.5e-22 111.3 229 42.8
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 1.5e-22 111.3 180 45.0
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 1.9e-22 110.9 377 33.7
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 7.2e-22 109.0 294 37.1
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 1.2e-21 108.2 374 34.5
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 2.1e-21 107.5 356 34.3
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 2.1e-21 107.5 354 34.5
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.7e-21 107.1 304 37.2
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 1.0e-20 105.1 354 34.5
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 1.4e-20 104.8 317 34.1
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 2.3e-20 104.0 331 33.8
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 8.8e-20 102.1 289 37.7
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 5.7e-19 99.4 331 35.6
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 7.5e-19 99.0 277 38.3
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 9.7e-19 98.6 282 39.7
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 9.7e-19 98.6 355 33.5
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 2.8e-18 97.1 343 35.9
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 3.7e-18 96.7 272 36.8
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 1.8e-17 94.4 319 35.1
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 4.1e-17 93.2 326 34.4
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 1.0e-15 88.6 302 34.8
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 5.0e-15 86.3 214 36.0
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 2.7e-13 80.5 369 30.1
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 2.0e-11 74.3 266 32.0
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 4.4e-11 73.2 319 32.6
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 4.4e-11 73.2 319 32.6
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 4.4e-11 73.2 319 32.6
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 5.7e-11 72.8 266 31.2
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 5.7e-11 72.8 310 30.6
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 2.2e-10 70.9 361 31.0
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 6.3e-10 69.3 311 31.5
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.1e-09 68.6 188 37.2
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 1.2e-08 65.1 101 49.5
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.5e-06 57.4 264 31.4
BcaC03g14581 Brassica carinata HOM05D007548 ORTHO05D009527 4.2e-06 56.6 143 33.6
A02p12160 Brassica napus HOM05D007548 ORTHO05D009527 4.2e-06 56.6 333 23.1
BolC2t08158H Brassica oleracea HOM05D007548 ORTHO05D009527 5.5e-06 56.2 337 23.4


User provided reference genes

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