Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.9e-56 219.9 115 100.0
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.1e-53 212.2 115 95.7
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.1e-41 173.3 120 76.7
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.0e-41 171.4 120 78.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.2e-40 169.9 120 76.7
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.6e-37 159.5 114 72.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.1e-33 145.2 117 70.1
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.0e-33 144.8 108 75.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 1.5e-32 142.9 114 66.7
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 4.9e-31 137.9 119 61.3
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.1e-30 136.7 118 65.3
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 7.1e-30 134.0 117 60.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 7.9e-29 130.6 114 60.5
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 2.3e-28 129.0 115 59.1
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 5.1e-28 127.9 117 59.8
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 5.1e-28 127.9 117 59.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 6.7e-28 127.5 115 62.6
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.1e-27 126.7 112 64.3
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.5e-27 126.3 116 63.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.9e-27 125.9 117 59.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 3.3e-27 125.2 114 56.1
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.3e-27 125.2 116 56.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 3.3e-27 125.2 118 58.5
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 4.3e-27 124.8 112 66.1
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 4.3e-27 124.8 114 61.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 5.7e-27 124.4 116 56.9
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 7.4e-27 124.0 116 58.6
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 7.4e-27 124.0 115 60.0
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 9.6e-27 123.6 117 57.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 9.6e-27 123.6 116 56.0
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 9.6e-27 123.6 118 60.2
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.3e-26 123.2 117 57.3
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.8e-26 122.1 112 60.7
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 4.8e-26 121.3 115 56.5
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 8.2e-26 120.6 115 55.7
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.1e-25 120.2 115 55.7
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.1e-25 120.2 117 56.4
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.8e-25 119.4 115 55.7
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.8e-25 119.4 119 56.3
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 2.4e-25 119.0 116 55.2
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 2.4e-25 119.0 115 55.7
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 3.1e-25 118.6 116 51.7
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 3.1e-25 118.6 115 54.8
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.1e-25 118.6 119 58.8
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.1e-25 118.6 116 59.5
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 4.1e-25 118.2 116 56.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 5.3e-25 117.9 115 54.8
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 5.3e-25 117.9 115 56.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 9.0e-25 117.1 116 56.9
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.5e-24 116.3 117 53.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 2.0e-24 115.9 116 56.9
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 2.0e-24 115.9 116 56.9
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.6e-24 115.5 120 54.2
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.6e-24 115.5 116 54.3
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.6e-24 115.5 116 53.4
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.4e-24 115.2 120 58.3
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.5e-24 114.8 119 51.3
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 5.9e-24 114.4 117 57.3
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 5.9e-24 114.4 119 54.6
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 7.6e-24 114.0 115 54.8
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.7e-23 112.8 116 56.0
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.7e-23 112.8 116 53.4
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 1.7e-23 112.8 103 63.1
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.2e-23 112.5 116 52.6
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 6.5e-23 110.9 117 56.4
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.1e-22 110.2 112 52.7
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 2.5e-22 109.0 117 53.0
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 3.2e-22 108.6 106 59.4
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 7.2e-22 107.5 114 52.6
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 7.2e-22 107.5 118 52.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 9.3e-22 107.1 117 51.3
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.3e-22 107.1 112 51.8
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.2e-21 106.7 136 50.7
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.1e-21 105.9 61 78.7
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 2.1e-21 105.9 109 57.8
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.1e-21 105.9 115 51.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.1e-21 105.9 104 57.7
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.1e-21 105.9 116 52.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 2.1e-21 105.9 117 52.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.1e-21 105.9 116 50.9
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 2.7e-21 105.5 117 53.0
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.6e-21 104.8 105 59.0
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.0e-20 103.6 63 71.4
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.0e-20 103.6 117 52.1
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.3e-20 103.2 90 58.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 3.0e-20 102.1 115 55.7
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 3.9e-20 101.7 111 52.3
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 5.1e-20 101.3 116 50.9
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 5.1e-20 101.3 115 51.3
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 5.1e-20 101.3 76 63.2
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 6.7e-20 100.9 117 49.6
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 5.7e-19 97.8 118 48.3
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.6e-18 96.3 67 64.2
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 3.7e-18 95.1 63 71.4
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 4.8e-18 94.7 104 56.7
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 6.3e-18 94.4 119 44.5
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 8.2e-18 94.0 76 63.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 8.2e-18 94.0 76 63.2
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.8e-17 92.8 106 50.0
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.8e-17 92.8 60 71.7
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.1e-17 92.0 106 53.8
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 5.3e-17 91.3 119 47.9
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 8.5e-15 84.0 115 44.3
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.1e-14 83.6 115 45.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.9e-14 82.8 106 44.3
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 2.5e-14 82.4 117 42.7
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.5e-14 81.3 107 49.5
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.3e-12 75.9 107 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.5e-11 72.4 108 41.7
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 5.3e-09 64.7 114 41.2
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 6.9e-09 64.3 31 96.8
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 5.9e-08 61.2 67 50.7
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 5.9e-08 61.2 105 41.0
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 3.8e-07 58.5 84 40.5
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 3.2e-06 55.5 112 37.5


User provided reference genes

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