Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008481g0050 Nicotiana tabacum HOM05D008102 ORTHO05D010266 1.8e-54 215.7 108 100.0
Solyc08g078730.3 Solanum lycopersicum HOM05D008102 ORTHO05D010266 4.9e-41 171.0 104 78.8
PGSC0003DMG400004757 Solanum tuberosum HOM05D008102 ORTHO05D010266 2.1e-39 165.6 106 79.2
Peaxi162Scf00002g01718 Petunia axillaris HOM05D008102 ORTHO05D010266 3.5e-39 164.9 111 81.1
Sopen08g027200 Solanum pennellii HOM05D008102 ORTHO05D010266 3.9e-38 161.4 106 76.4
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 7.2e-32 140.6 108 70.4
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 8.8e-14 80.5 67 58.2
Manes.02G038800 Manihot esculenta HOM05D008102 ORTHO05D010266 9.7e-13 77.0 77 51.9
THA.LOC109116598 Tarenaya hassleriana HOM05D008102 ORTHO05D010266 1.3e-12 76.6 66 53.0
A04p27180 Brassica napus HOM05D008102 ORTHO05D010266 1.1e-11 73.6 94 42.6
BraA04t18216Z Brassica rapa HOM05D008102 ORTHO05D010266 1.1e-11 73.6 94 42.6
Nn6g33980 Nelumbo nucifera HOM05D008102 ORTHO05D010266 1.8e-11 72.8 69 52.2
BcaC02g07675 Brassica carinata HOM05D008102 ORTHO05D010266 2.4e-11 72.4 94 41.5
C04p64690 Brassica napus HOM05D008102 ORTHO05D010266 2.4e-11 72.4 94 41.5
Glyma.17G141000 Glycine max HOM05D008102 ORTHO05D010266 4.1e-11 71.6 62 56.5
Lj4g0008790 Lotus japonicus HOM05D008102 ORTHO05D010266 5.3e-11 71.2 98 40.8
Nn1g01035 Nelumbo nucifera HOM05D008102 ORTHO05D010266 5.3e-11 71.2 64 57.8
Thhalv10017440m.g Eutrema salsugineum HOM05D008102 ORTHO05D010266 1.6e-10 69.7 89 38.2
EL10Ac5g13056 Beta vulgaris HOM05D008102 ORTHO05D010266 2.0e-10 69.3 66 47.0
TWI81G0747 Tripterygium wilfordii HOM05D008102 ORTHO05D010266 2.6e-10 68.9 67 47.8
Gohir.A12G217600 Gossypium hirsutum HOM05D008102 ORTHO05D010266 4.5e-10 68.2 62 53.2
Gohir.D12G220100 Gossypium hirsutum HOM05D008102 ORTHO05D010266 4.5e-10 68.2 62 53.2
Psat4g071720 Pisum sativum HOM05D008102 ORTHO05D010266 4.5e-10 68.2 65 52.3
Lsat_1_v5_gn_6_91441 Lactuca sativa HOM05D008102 ORTHO05D010266 5.9e-10 67.8 79 43.0
Thecc.03G253100 Theobroma cacao HOM05D008102 ORTHO05D010266 5.9e-10 67.8 44 65.9
GSVIVG01001314001 Vitis vinifera HOM05D008102 ORTHO05D010266 5.9e-10 67.8 89 43.8
Ah.12g056760 Amaranthus hybridus HOM05D008102 ORTHO05D010266 7.7e-10 67.4 66 43.9
PSO063G5269 Papaver somniferum HOM05D008102 ORTHO05D010266 7.7e-10 67.4 67 46.3
BolC4t27946H Brassica oleracea HOM05D008102 ORTHO05D010266 1.0e-09 67.0 73 43.8
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 1.0e-09 67.0 60 53.3
Rhsim07G0108100 Rhododendron simsii HOM05D008102 ORTHO05D010266 1.0e-09 67.0 101 38.6
Carub.0004s1746 Capsella rubella HOM05D008102 ORTHO05D010266 1.3e-09 66.6 102 36.3
AUR62039959 Chenopodium quinoa HOM05D008102 ORTHO05D010266 1.3e-09 66.6 67 44.8
ClCG10G002750 Citrullus lanatus HOM05D008102 ORTHO05D010266 1.3e-09 66.6 58 53.4
HanXRQChr03g0088621 Helianthus annuus HOM05D008102 ORTHO05D010266 1.3e-09 66.6 82 41.5
QL12p012528 Quercus lobata HOM05D008102 ORTHO05D010266 1.3e-09 66.6 79 43.0
CARHR129970 Cardamine hirsuta HOM05D008102 ORTHO05D010266 2.2e-09 65.9 86 39.5
Gorai.008G235800 Gossypium raimondii HOM05D008102 ORTHO05D010266 2.2e-09 65.9 62 51.6
Os01g0927300 Oryza sativa ssp. japonica HOM05D008102 ORTHO05D010266 2.2e-09 65.9 58 53.4
Potri.003G110500 Populus trichocarpa HOM05D008102 ORTHO05D010266 2.2e-09 65.9 92 38.0
Hund14530 Selenicereus undatus HOM05D008102 ORTHO05D010266 2.2e-09 65.9 67 43.3
Zm00001eb363820 Zea mays HOM05D008102 ORTHO05D010266 2.2e-09 65.9 78 46.2
CsaV3_3G002790 Cucumis sativus L. HOM05D008102 ORTHO05D010266 2.9e-09 65.5 78 44.9
PGR031G0607 Punica granatum HOM05D008102 ORTHO05D010266 3.8e-09 65.1 66 47.0
Eucgr.L01885 Eucalyptus grandis HOM05D008102 ORTHO05D010266 6.5e-09 64.3 46 58.7
GSVIVG01006641001 Vitis vinifera HOM05D008102 ORTHO05D010266 6.5e-09 64.3 63 47.6
HPP92_007043 Vanilla planifolia HOM05D008102 ORTHO05D010266 1.1e-08 63.5 94 42.6
CDE12G0094 Ceratophyllum demersum HOM05D008102 ORTHO05D010266 1.9e-08 62.8 81 43.2
SGA_v2.0_scaffold120G32878 Striga asiatica HOM05D008102 ORTHO05D010266 1.9e-08 62.8 62 48.4
AT2G35730 Arabidopsis thaliana HOM05D008102 ORTHO05D010266 2.5e-08 62.4 88 37.5
Glyma.05G058600 Glycine max HOM05D008102 ORTHO05D010266 2.5e-08 62.4 63 50.8
PSO782G4576 Papaver somniferum HOM05D008102 ORTHO05D010266 2.5e-08 62.4 69 44.9
Sabra03G0076600 Salix brachista HOM05D008102 ORTHO05D010266 4.2e-08 61.6 92 35.9
TPR.G37625 Trifolium pratense HOM05D008102 ORTHO05D010266 4.2e-08 61.6 69 43.5
CiPaw.11G153400 Carya illinoinensis HOM05D008102 ORTHO05D010266 7.2e-08 60.8 88 38.6
Sp4g18000 Schrenkiella parvula HOM05D008102 ORTHO05D010266 7.2e-08 60.8 89 38.2
Phvul.003G219900 Phaseolus vulgaris HOM05D008102 ORTHO05D010266 9.4e-08 60.5 62 43.5
Sed0012982 Sechium edule HOM05D008102 ORTHO05D010266 1.2e-07 60.1 71 45.1
VMungo0251G3084 Vigna mungo HOM05D008102 ORTHO05D010266 1.2e-07 60.1 62 43.5
AL4G31820 Arabidopsis lyrata HOM05D008102 ORTHO05D010266 2.7e-07 58.9 92 35.9
Eucgr.D02069 Eucalyptus grandis HOM05D008102 ORTHO05D010266 3.6e-07 58.5 43 53.5
Duzib084G0060 Durio zibethinus HOM05D008102 ORTHO05D010266 4.7e-07 58.2 49 51.0
Eucgr.D02071 Eucalyptus grandis HOM05D008102 ORTHO05D010266 8.0e-07 57.4 43 53.5
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 1.8e-06 56.2 60 43.3


User provided reference genes

Program Settings