Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.9e-162 574.7 284 100.0
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.5e-132 474.6 242 97.5
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 2.3e-122 442.6 242 90.9
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 2.6e-121 439.1 242 90.9
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.7e-120 436.4 242 90.1
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 5.0e-117 424.9 243 88.5
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.4e-106 390.2 240 80.8
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.8e-103 379.8 239 76.2
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.3e-101 373.6 239 75.3
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 5.0e-101 371.7 239 74.5
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.9e-100 369.8 239 73.6
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 2.5e-100 369.4 240 76.7
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 7.2e-100 367.9 239 73.6
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 7.2e-100 367.9 238 76.1
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 9.5e-100 367.5 239 73.6
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.0e-98 362.1 238 73.1
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 5.2e-98 361.7 243 77.8
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.6e-97 359.4 238 72.3
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 4.4e-97 358.6 239 74.1
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 1.4e-95 353.6 241 74.7
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 3.2e-95 352.4 239 72.4
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 5.4e-95 351.7 244 71.3
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 9.2e-95 350.9 239 72.0
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-94 350.5 238 71.0
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-94 350.5 238 71.0
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 1.6e-94 350.1 234 72.2
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 2.0e-94 349.7 242 70.7
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 2.0e-94 349.7 240 72.1
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.0e-94 349.7 266 66.2
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 3.5e-94 349.0 262 70.2
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 7.8e-94 347.8 244 72.5
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 5.0e-93 345.1 244 74.6
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.9e-92 343.2 239 71.1
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 4.3e-92 342.0 239 70.7
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 4.3e-92 342.0 239 72.0
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 4.3e-92 342.0 241 71.8
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 4.3e-92 342.0 237 69.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 5.6e-92 341.7 241 72.2
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 5.6e-92 341.7 239 72.4
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.2e-91 340.5 241 73.4
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 6.2e-91 338.2 242 71.1
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 8.0e-91 337.8 243 70.4
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 1.0e-90 337.4 241 69.3
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.4e-90 337.0 271 65.7
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.4e-90 337.0 240 69.6
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.3e-90 336.3 236 71.6
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 3.1e-90 335.9 240 69.2
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 4.0e-90 335.5 240 67.5
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 8.9e-90 334.3 242 71.5
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.5e-89 333.6 239 69.5
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 4.4e-89 332.0 239 68.6
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 4.4e-89 332.0 237 70.9
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 4.4e-89 332.0 234 70.9
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.5e-89 331.3 239 68.6
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 7.5e-89 331.3 234 70.9
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.7e-88 330.1 241 67.2
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 2.9e-88 329.3 241 68.0
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 2.9e-88 329.3 241 67.2
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 6.4e-88 328.2 237 68.8
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 1.1e-87 327.4 242 69.0
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 3.2e-87 325.9 239 67.8
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 4.1e-87 325.5 237 70.5
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 4.1e-87 325.5 237 67.9
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.6e-86 323.6 246 66.7
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 1.6e-86 323.6 242 70.7
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 1.6e-86 323.6 241 67.2
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.0e-85 320.9 243 66.3
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.0e-85 320.9 240 65.8
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 3.0e-85 319.3 239 66.9
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 3.9e-85 318.9 247 68.4
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 1.9e-84 316.6 246 65.0
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 2.5e-84 316.2 241 69.3
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 2.5e-84 316.2 236 65.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.3e-84 315.8 239 66.1
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 9.5e-84 314.3 241 68.9
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.8e-83 312.8 240 65.8
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.8e-83 312.8 239 65.3
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 2.8e-83 312.8 244 66.8
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 3.6e-83 312.4 243 68.7
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 4.7e-83 312.0 245 64.9
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 8.1e-83 311.2 245 62.9
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 8.1e-83 311.2 237 65.8
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 4.0e-82 308.9 237 65.8
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 5.2e-82 308.5 197 75.6
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 5.2e-82 308.5 244 65.2
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.5e-81 307.0 244 66.4
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 2.0e-81 306.6 237 64.6
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.6e-81 306.2 270 58.9
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 4.4e-81 305.4 232 69.0
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 7.5e-81 304.7 242 66.5
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 1.9e-79 300.1 244 63.9
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.2e-78 297.4 242 65.7
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.2e-78 297.4 241 65.1
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 1.2e-78 297.4 186 76.3
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 1.6e-78 297.0 245 64.5
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 1.6e-78 297.0 245 64.5
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 2.7e-78 296.2 244 64.3
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 2.7e-78 296.2 246 62.6
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 4.6e-78 295.4 245 64.5
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 4.3e-76 288.9 232 65.1
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 4.3e-76 288.9 240 62.1
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.6e-75 287.0 242 62.8
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 6.2e-75 285.0 241 63.1
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 3.4e-73 279.3 219 65.8
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.4e-73 278.9 198 70.2
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 4.4e-73 278.9 238 63.0
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.9e-68 263.5 235 61.3
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 8.9e-66 254.6 129 92.2
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 5.8e-65 251.9 152 79.6
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.7e-64 250.4 200 62.0
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.2e-62 244.2 140 81.4
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 7.8e-62 241.5 219 57.1
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.9e-61 239.2 140 79.3
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 4.3e-60 235.7 194 59.8
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 8.1e-59 231.5 194 59.8
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.1e-58 231.1 225 55.6
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 6.9e-58 228.4 229 55.5
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.3e-53 213.4 126 79.4
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.1e-50 204.5 221 50.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 2.1e-46 190.3 139 65.5
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 6.7e-45 185.3 219 50.2
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 7.6e-41 171.8 138 62.3
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 8.4e-40 168.3 129 65.9
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.9e-38 161.8 138 61.6
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 2.3e-37 160.2 118 62.7
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 2.5e-31 140.2 249 38.2
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.8e-29 134.0 79 81.0
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 4.1e-26 122.9 73 79.5
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.3e-11 74.7 43 81.4
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 8.0e-06 55.5 45 62.2


User provided reference genes

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