Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 3.1e-246 854.7 454 100.0
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 2.0e-216 755.7 430 90.0
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 7.5e-216 753.8 430 89.8
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 1.7e-212 742.7 485 84.7
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 3.0e-212 741.9 430 90.5
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 3.5e-205 718.4 430 88.4
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 1.1e-193 680.2 387 92.8
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 1.4e-185 653.3 435 77.2
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 4.0e-185 651.7 432 76.9
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 9.9e-184 647.1 436 77.5
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 1.7e-183 646.4 431 77.0
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 2.4e-182 642.5 430 77.2
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 2.7e-181 639.0 437 76.7
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 6.6e-180 634.4 435 76.6
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 6.6e-180 634.4 430 75.6
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 4.0e-177 625.2 424 75.9
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 1.2e-176 623.6 426 74.6
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 1.5e-176 623.2 438 74.4
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 2.0e-176 622.9 437 74.1
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 4.5e-176 621.7 426 73.7
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 9.9e-176 620.5 453 72.4
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.9e-175 619.0 426 76.1
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.1e-174 617.1 431 74.5
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 9.3e-174 614.0 423 74.0
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 1.2e-173 613.6 437 74.8
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 1.2e-173 613.6 423 74.2
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.7e-173 612.5 430 76.0
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 7.9e-173 610.9 432 74.8
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 1.3e-172 610.1 437 74.8
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 2.3e-172 609.4 433 73.9
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 2.3e-172 609.4 426 75.6
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 4.3e-171 605.1 432 74.3
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 7.4e-171 604.4 436 73.2
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 6.9e-169 597.8 418 74.4
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 6.9e-169 597.8 418 74.4
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 9.0e-169 597.4 438 71.5
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 1.2e-168 597.0 418 74.2
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.2e-168 597.0 419 74.2
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 1.2e-168 597.0 418 74.2
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 1.2e-168 597.0 418 74.2
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 1.2e-168 597.0 438 71.0
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 1.5e-168 596.7 419 74.5
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 2.0e-168 596.3 428 73.8
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 4.5e-168 595.1 423 74.0
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 7.6e-168 594.3 444 69.8
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 9.9e-168 594.0 463 69.8
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 1.3e-167 593.6 436 72.0
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.3e-167 593.6 433 71.8
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 1.7e-167 593.2 419 74.5
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 4.2e-166 588.6 422 73.2
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 5.5e-166 588.2 429 72.0
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 1.6e-165 586.6 418 73.2
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 1.6e-165 586.6 432 72.5
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 1.6e-165 586.6 419 73.0
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 3.5e-165 585.5 427 72.8
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 3.5e-165 585.5 437 71.4
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.6e-165 585.1 429 72.3
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 6.0e-165 584.7 422 72.7
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 6.0e-165 584.7 433 72.3
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 7.9e-165 584.3 437 70.3
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.0e-164 583.9 425 70.6
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 1.8e-164 583.2 434 70.3
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 2.3e-164 582.8 430 72.6
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 3.9e-164 582.0 420 73.1
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 5.1e-164 581.6 432 72.0
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 6.7e-164 581.3 419 70.9
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 6.7e-164 581.3 433 74.1
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 8.7e-164 580.9 419 72.8
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 1.9e-163 579.7 428 72.7
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 2.5e-163 579.3 420 71.0
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 1.3e-162 577.0 428 70.6
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 2.8e-162 575.9 438 69.2
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 1.1e-161 573.9 429 70.9
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 1.4e-161 573.5 449 70.2
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 1.4e-161 573.5 438 69.4
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 1.4e-161 573.5 427 70.3
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 3.1e-161 572.4 438 68.9
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 5.3e-161 571.6 431 71.5
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 2.6e-160 569.3 430 71.4
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 1.3e-159 567.0 467 66.4
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 3.8e-159 565.5 426 70.0
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 3.8e-159 565.5 435 68.5
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 4.9e-159 565.1 420 70.2
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 1.4e-158 563.5 427 69.1
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 1.9e-158 563.1 434 69.1
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 1.9e-158 563.1 429 68.5
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.5e-158 562.8 449 68.4
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 4.2e-158 562.0 416 71.2
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 2.1e-157 559.7 409 73.3
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 3.5e-157 558.9 416 71.4
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 7.9e-157 557.8 424 68.2
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 3.7e-154 548.9 430 70.0
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 6.3e-154 548.1 429 68.1
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 2.6e-152 542.7 411 70.8
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 2.6e-152 542.7 429 66.0
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 3.4e-152 542.3 388 72.7
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 3.8e-151 538.9 467 65.5
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 1.2e-149 533.9 433 68.1
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.8e-148 530.0 433 68.1
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 3.3e-147 525.8 425 67.3
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 6.3e-146 521.5 522 58.8
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 8.2e-146 521.2 428 66.6
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 9.1e-145 517.7 513 56.9
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 1.1e-142 510.8 430 62.8
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 1.8e-140 503.4 435 64.6
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 3.0e-140 502.7 435 63.0
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 2.8e-138 496.1 434 62.9
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 3.4e-136 489.2 387 69.0
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 7.7e-136 488.0 490 58.6
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 4.7e-133 478.8 388 68.6
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 8.8e-132 474.6 426 62.4
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.6e-131 473.0 378 69.3
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 5.7e-131 471.9 421 59.4
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 1.8e-124 450.3 418 58.1
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 3.7e-122 442.6 419 59.4
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 2.4e-121 439.9 413 57.9
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 5.0e-119 432.2 389 62.2
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 6.5e-119 431.8 433 53.6
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 9.4e-118 427.9 326 70.2
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 1.6e-117 427.2 372 62.1
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 8.3e-114 414.8 419 54.7
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 2.4e-113 413.3 346 64.7
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.1e-113 412.5 399 56.6
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 7.0e-113 411.8 431 53.8
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 3.1e-105 386.3 434 52.3
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.9e-103 379.8 439 50.3
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.6e-96 355.9 355 55.8
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 9.0e-68 261.9 384 40.6
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 1.3e-66 258.1 215 63.7
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 3.6e-61 240.0 428 39.3
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 3.0e-39 167.2 204 55.4
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 5.9e-27 126.3 83 74.7
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 6.1e-16 89.7 53 81.1
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.5e-14 85.1 44 88.6
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.5e-14 85.1 44 88.6
Actinidia13832 Actinidia chinensis HOM05D005555 ORTHO05D006923 2.3e-07 61.2 53 62.3


User provided reference genes

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