Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008438g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 7.7e-73 277.3 170 100.0
CAN.G1741.1 Capsicum annuum HOM05D005201 ORTHO05D006139 3.6e-70 268.5 170 95.9
Nitab4.5_0009069g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 1.4e-69 266.5 170 97.6
Solyc08g005910.3 Solanum lycopersicum HOM05D005201 ORTHO05D006139 8.8e-69 263.8 170 95.9
Sopen08g001880 Solanum pennellii HOM05D005201 ORTHO05D006139 8.8e-69 263.8 170 95.9
PGSC0003DMG400004473 Solanum tuberosum HOM05D005201 ORTHO05D006139 4.4e-68 261.5 170 95.3
Peaxi162Scf00045g01329 Petunia axillaris HOM05D005201 ORTHO05D006139 1.5e-63 246.5 174 89.1
CAN.G947.20 Capsicum annuum HOM05D005201 ORTHO05D006139 6.8e-61 237.7 171 84.8
Nitab4.5_0001327g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 1.2e-57 226.9 170 81.2
CSS0000299 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 6.4e-51 204.5 169 72.2
CSS0007100 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 6.4e-51 204.5 169 73.4
Actinidia25720 Actinidia chinensis HOM05D005201 ORTHO05D006139 1.8e-50 203.0 164 76.2
Sopen12g032120 Solanum pennellii HOM05D005201 ORTHO05D006139 7.0e-50 201.1 166 76.5
Actinidia03317 Actinidia chinensis HOM05D005201 ORTHO05D006139 1.2e-49 200.3 170 74.1
Oeu057144.1 Olea europaea HOM05D005201 ORTHO05D006139 1.6e-49 199.9 165 75.8
MSTRG.25759 Avicennia marina HOM05D005201 ORTHO05D006139 2.0e-49 199.5 163 70.6
Atru.chr6.2111 Acer truncatum HOM05D005201 ORTHO05D006139 5.0e-48 194.9 158 77.8
Aqoxy3G02454 Aquilegia oxysepala HOM05D005201 ORTHO05D006139 2.5e-47 192.6 166 73.5
COL.COLO4_16707 Corchorus olitorius HOM05D005201 ORTHO05D006139 1.2e-46 190.3 165 73.9
SalBow4G2195 Salvia bowleyana HOM05D005201 ORTHO05D006139 2.1e-46 189.5 170 68.2
MD06G1017600 Malus domestica HOM05D005201 ORTHO05D006139 2.8e-46 189.1 168 73.2
Sed0016355 Sechium edule HOM05D005201 ORTHO05D006139 2.8e-46 189.1 159 75.5
TAR375G0792 Trochodendron aralioides HOM05D005201 ORTHO05D006139 3.6e-46 188.7 175 69.1
Oeu002017.1 Olea europaea HOM05D005201 ORTHO05D006139 4.7e-46 188.3 170 72.4
Potri.001G129800 Populus trichocarpa HOM05D005201 ORTHO05D006139 6.2e-46 188.0 164 73.8
MD00G1078600 Malus domestica HOM05D005201 ORTHO05D006139 1.8e-45 186.4 168 70.8
CANSAT21G0726 Cannabis sativa HOM05D005201 ORTHO05D006139 3.1e-45 185.7 172 68.6
MELO3C016255.2 Cucumis melo HOM05D005201 ORTHO05D006139 3.1e-45 185.7 166 56.6
Duzib205G0777 Durio zibethinus HOM05D005201 ORTHO05D006139 1.2e-44 183.7 166 74.1
Cc00_g08490 Coffea canephora HOM05D005201 ORTHO05D006139 1.5e-44 183.3 171 70.8
PGSC0003DMG400029376 Solanum tuberosum HOM05D005201 ORTHO05D006139 2.6e-44 182.6 147 78.9
TWI60G0094 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 1.7e-43 179.9 175 68.6
Glyma.01G150400 Glycine max HOM05D005201 ORTHO05D006139 4.1e-42 175.3 172 69.2
SGA_v2.0_scaffold269G46298 Striga asiatica HOM05D005201 ORTHO05D006139 5.4e-42 174.9 170 57.1
BcaC04g23459 Brassica carinata HOM05D005201 ORTHO05D006139 9.2e-42 174.1 162 70.4
BraA09t36375Z Brassica rapa HOM05D001456 ORTHO05D002799 9.2e-42 174.1 162 70.4
Nitab4.5_0001159g0040 Nicotiana tabacum HOM05D005201 ORTHO05D006139 9.2e-42 174.1 170 72.9
GSVIVG01036941001 Vitis vinifera HOM05D005201 ORTHO05D006139 1.6e-41 173.3 175 71.4
A09p07260 Brassica napus HOM05D005201 ORTHO05D006139 7.8e-41 171.0 154 70.8
C09p08120 Brassica napus HOM05D005201 ORTHO05D006139 7.8e-41 171.0 154 70.8
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 7.8e-41 171.0 154 70.8
Lalb_Chr16g0380611 Lupinus albus HOM05D005201 ORTHO05D006139 7.8e-41 171.0 158 67.1
CDE01G0225 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 6.6e-40 167.9 159 55.3
Lsat_1_v5_gn_6_15560 Lactuca sativa HOM05D005201 ORTHO05D006139 8.6e-40 167.5 159 69.2
AL8G37890 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 1.1e-39 167.2 162 69.1
Carub.0008s2190 Capsella rubella HOM05D005201 ORTHO05D006139 7.3e-39 164.5 148 70.9
Thhalv10005013m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 7.3e-39 164.5 163 68.1
THA.LOC104818333 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 7.3e-39 164.5 165 68.5
FvH4_5g24200 Fragaria vesca HOM05D005201 ORTHO05D006139 1.2e-38 163.7 173 52.0
FAN13G2355 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.2e-38 163.7 173 52.0
FAN18G1178 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.2e-38 163.7 173 52.0
FAN04G1315 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.4e-37 160.2 173 51.4
FAN10G0178 Fragaria x ananassa HOM05D002235 ORTHO05D006139 1.8e-37 159.8 153 54.9
FAN14G2110 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.8e-37 159.8 153 54.9
Sabra01G0100200 Salix brachista HOM05D005201 ORTHO05D006139 1.8e-37 159.8 238 42.4
FvH4_6g43270 Fragaria vesca HOM05D005201 ORTHO05D006139 4.0e-37 158.7 153 54.2
AT5G61230 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 5.2e-37 158.3 148 67.6
Migut.A00504 Erythranthe guttata HOM05D005201 ORTHO05D006139 5.2e-37 158.3 169 60.4
Hma1.2p1_0268F.1_g107720 Hydrangea macrophylla HOM05D005201 ORTHO05D006139 6.8e-37 157.9 170 59.4
RcHm_v2.0_Chr7g0214011 Rosa chinensis HOM05D005201 ORTHO05D006139 6.8e-37 157.9 173 62.4
Ah.12g056090 Amaranthus hybridus HOM05D005201 ORTHO05D006139 8.9e-37 157.5 173 53.2
Prupe.5G018400 Prunus persica HOM05D005201 ORTHO05D006139 8.9e-37 157.5 168 52.4
ATR0829G041 Amborella trichopoda HOM05D005201 ORTHO05D006139 1.2e-36 157.1 149 66.4
MSTRG.11837 Avicennia marina HOM05D005201 ORTHO05D006139 2.0e-36 156.4 170 63.5
FAN05G2652 Fragaria x ananassa HOM05D005201 ORTHO05D006139 2.6e-36 156.0 147 54.4
THA.LOC104801352 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 1.3e-35 153.7 162 64.8
DCAR_030956 Daucus carota HOM05D005201 ORTHO05D006139 1.7e-35 153.3 170 61.8
Eucgr.D02584 Eucalyptus grandis HOM05D005201 ORTHO05D006139 1.7e-35 153.3 175 49.7
RcHm_v2.0_Chr2g0159541 Rosa chinensis HOM05D005201 ORTHO05D006139 1.7e-35 153.3 168 50.0
ClCG07G011320 Citrullus lanatus HOM05D005201 ORTHO05D006139 2.2e-35 152.9 163 65.6
DCAR_000700 Daucus carota HOM05D005201 ORTHO05D006139 2.9e-35 152.5 169 53.3
Hund14321 Selenicereus undatus HOM05D005201 ORTHO05D006139 3.7e-35 152.1 171 60.2
FAN08G2124 Fragaria x ananassa HOM05D005201 ORTHO05D006139 4.9e-35 151.8 173 49.1
arahy.Tifrunner.gnm1.ann1.02E8LK Arachis hypogaea HOM05D005201 ORTHO05D006139 1.1e-34 150.6 158 66.5
arahy.Tifrunner.gnm1.ann1.2T22I7 Arachis hypogaea HOM05D005201 ORTHO05D006139 1.1e-34 150.6 158 66.5
Glyma.09G215400 Glycine max HOM05D005201 ORTHO05D006139 1.1e-34 150.6 172 64.0
AUR62022383 Chenopodium quinoa HOM05D005201 ORTHO05D006139 1.4e-34 150.2 172 60.5
EL10Ac5g11893 Beta vulgaris HOM05D005201 ORTHO05D006139 2.4e-34 149.4 162 63.6
AUR62007435 Chenopodium quinoa HOM05D005201 ORTHO05D006139 2.4e-34 149.4 172 58.7
Gohir.A08G146800 Gossypium hirsutum HOM05D005201 ORTHO05D006139 3.2e-34 149.1 167 64.1
Pp3c6_1190 Physcomitrium patens HOM05D005201 ORTHO05D006139 3.2e-34 149.1 161 60.2
Thecc.03G324300 Theobroma cacao HOM05D005201 ORTHO05D006139 3.2e-34 149.1 159 63.5
AUR62027303 Chenopodium quinoa HOM05D005201 ORTHO05D006139 7.1e-34 147.9 172 58.7
Ca_25081_v3 Cicer arietinum L. HOM05D005201 ORTHO05D006139 7.1e-34 147.9 173 47.4
Gohir.D08G167900 Gossypium hirsutum HOM05D005201 ORTHO05D006139 7.1e-34 147.9 167 64.1
Gorai.004G175100 Gossypium raimondii HOM05D005201 ORTHO05D006139 7.1e-34 147.9 167 64.1
Potri.003G104400 Populus trichocarpa HOM05D005201 ORTHO05D006139 7.1e-34 147.9 168 61.3
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 7.1e-34 147.9 163 58.9
Cpa.g.sc137.21 Carica papaya HOM05D005201 ORTHO05D006139 1.6e-33 146.7 160 65.0
HanXRQChr08g0226681 Helianthus annuus HOM05D005201 ORTHO05D006139 1.6e-33 146.7 163 61.3
CsaV3_4G006880 Cucumis sativus L. HOM05D005201 ORTHO05D006139 2.7e-33 146.0 163 62.6
Sabra03G0071400 Salix brachista HOM05D005201 ORTHO05D006139 2.7e-33 146.0 164 62.8
Ciclev10002646m.g Citrus clementina HOM05D005201 ORTHO05D006139 4.6e-33 145.2 150 68.0
Medtr5g026550 Medicago truncatula HOM05D005201 ORTHO05D006139 4.6e-33 145.2 173 46.8
Psat2g143240 Pisum sativum HOM05D005201 ORTHO05D006139 4.6e-33 145.2 173 58.4
SMO356G0124 Selaginella moellendorffii HOM05D005201 ORTHO05D006139 4.6e-33 145.2 126 73.0
Sc07g0008280 Simmondsia chinensis HOM05D005201 ORTHO05D006139 4.6e-33 145.2 173 61.3
ECA240G4218 Erigeron canadensis HOM05D005201 ORTHO05D006139 6.0e-33 144.8 165 60.6
PGR031G3990 Punica granatum HOM05D005201 ORTHO05D006139 1.0e-32 144.1 175 60.0
PGR067G0002 Punica granatum HOM05D005201 ORTHO05D006139 1.0e-32 144.1 175 60.0
Rhsim01G0132000 Rhododendron simsii HOM05D005201 ORTHO05D006139 1.0e-32 144.1 170 44.1
Ah.02g117370 Amaranthus hybridus HOM05D005201 ORTHO05D006139 1.7e-32 143.3 173 60.7
TPR.G39676 Trifolium pratense HOM05D005201 ORTHO05D006139 1.7e-32 143.3 173 59.5
CiPaw.11G104600 Carya illinoinensis HOM05D005201 ORTHO05D006139 3.0e-32 142.5 173 58.4
Sed0020489 Sechium edule HOM05D005201 ORTHO05D006139 3.0e-32 142.5 164 64.6
HanXRQChr07g0205241 Helianthus annuus HOM05D005201 ORTHO05D006139 6.6e-32 141.4 161 49.7
VMungo1215G2692 Vigna mungo HOM05D005201 ORTHO05D006139 8.6e-32 141.0 159 61.0
TWI32G1103 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 1.1e-31 140.6 175 60.0
unitig_0.g2827 Utricularia gibba HOM05D005201 ORTHO05D006139 1.5e-31 140.2 170 63.5
Lj2g0015792 Lotus japonicus HOM05D005201 ORTHO05D006139 2.5e-31 139.4 173 57.2
Phvul.002G126500 Phaseolus vulgaris HOM05D005201 ORTHO05D006139 3.3e-31 139.0 159 60.4
QL12p002095 Quercus lobata HOM05D005201 ORTHO05D006139 4.3e-31 138.7 165 61.8
Lalb_Chr09g0325181 Lupinus albus HOM05D005201 ORTHO05D006139 7.3e-31 137.9 158 60.8
Dinv09437 Davidia involucrata HOM05D005201 ORTHO05D006139 9.5e-31 137.5 170 59.4
PSO384G4870 Papaver somniferum HOM05D005201 ORTHO05D006139 1.6e-30 136.7 169 56.2
Thhalv10014823m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 2.8e-30 136.0 168 61.9
Eucgr.B00905 Eucalyptus grandis HOM05D005201 ORTHO05D006139 3.6e-30 135.6 81 77.8
PSO339G2945 Papaver somniferum HOM05D005201 ORTHO05D006139 3.6e-30 135.6 173 53.2
Sp2g24460 Schrenkiella parvula HOM05D005201 ORTHO05D006139 8.1e-30 134.4 162 63.0
Aa31LG11G2130 Aethionema arabicum HOM05D005201 ORTHO05D006139 3.1e-29 132.5 167 61.7
Lsat_1_v5_gn_5_60900 Lactuca sativa HOM05D005201 ORTHO05D006139 3.1e-29 132.5 169 52.7
AT5G07840 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 6.8e-29 131.3 159 61.6
BraA03t13806Z Brassica rapa HOM05D005201 ORTHO05D006139 1.2e-28 130.6 164 60.4
CiPaw.12G072500 Carya illinoinensis HOM05D005201 ORTHO05D006139 1.2e-28 130.6 173 43.9
CDE12G0445 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 1.2e-28 130.6 159 45.9
CARHR274980 Cardamine hirsuta HOM05D005201 ORTHO05D006139 1.5e-28 130.2 162 61.1
Solyc12g096260.2 Solanum lycopersicum HOM05D005201 ORTHO05D006139 1.5e-28 130.2 126 73.0
BcaC06g33218 Brassica carinata HOM05D005201 ORTHO05D006139 2.0e-28 129.8 164 60.4
BolC7t45014H Brassica oleracea HOM05D005201 ORTHO05D006139 2.0e-28 129.8 164 60.4
A03p46860 Brassica napus HOM05D005201 ORTHO05D006139 2.6e-28 129.4 164 59.8
Os02g0102600 Oryza sativa ssp. japonica HOM05D005201 ORTHO05D006139 3.4e-28 129.0 157 44.6
Manes.04G035300 Manihot esculenta HOM05D005201 ORTHO05D006139 9.9e-28 127.5 163 58.9
C07p44910 Brassica napus HOM05D005201 ORTHO05D006139 6.4e-27 124.8 165 58.8
AL6G18180 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 2.4e-26 122.9 168 59.5
SEGI_37761 Sequoiadendron giganteum HOM05D005201 ORTHO05D006139 6.0e-25 118.2 171 54.4
FAN02G0543 Fragaria x ananassa HOM05D002235 ORTHO05D006252 7.8e-25 117.9 73 69.9
PSO063G1500 Papaver somniferum HOM05D005201 ORTHO05D006139 2.3e-24 116.3 150 60.7
PSO782G0015 Papaver somniferum HOM05D005201 ORTHO05D006139 2.3e-24 116.3 150 60.7
AagrBONN_evm.TU.Sc2ySwM_344.4086 Anthoceros agrestis HOM05D005201 ORTHO05D006139 6.6e-24 114.8 124 45.2
Lsat_1_v5_gn_8_13820 Lactuca sativa HOM05D005201 ORTHO05D006139 4.7e-22 108.6 66 75.8
Peaxi162Scf00876g00121 Petunia axillaris HOM05D005201 ORTHO05D006139 6.2e-22 108.2 65 78.5
Lj8A408T7 Lonicera japonica HOM05D005201 ORTHO05D006139 4.0e-21 105.5 129 46.5
Mapoly0093s0041 Marchantia polymorpha HOM05D005201 ORTHO05D006139 4.0e-21 105.5 126 60.3
vmacro21163 Vaccinium macrocarpon HOM05D005201 ORTHO05D006139 3.8e-19 99.0 132 43.2
Haze_08003 Corylus avellana HOM05D005201 ORTHO05D006139 6.6e-16 88.2 135 40.0
Dinv37463 Davidia involucrata HOM05D005201 ORTHO05D006139 5.6e-15 85.1 97 71.1
SGA_v2.0_scaffold2264G54095 Striga asiatica HOM05D005201 ORTHO05D006139 8.1e-14 81.3 111 41.4
Zm00001eb229310 Zea mays HOM05D005201 ORTHO05D006139 4.0e-13 79.0 81 50.6
CANSAT11G0816 Cannabis sativa HOM05D005201 ORTHO05D006139 2.2e-11 73.2 152 32.2
Nn3g19216 Nelumbo nucifera HOM05D005201 ORTHO05D006139 2.7e-09 66.2 61 55.7


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