Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 1.1e-42 176.8 127 100.0
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 7.9e-30 134.0 128 82.8
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.3e-24 116.7 132 56.8
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 2.9e-24 115.5 132 56.8
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 6.5e-24 114.4 129 60.5
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 3.3e-20 102.1 134 57.5
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.2e-16 89.4 125 50.4
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 8.5e-16 87.4 125 50.4
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 2.5e-15 85.9 124 42.7
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 7.2e-15 84.3 124 49.2
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 6.1e-14 81.3 123 41.5
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.0e-13 80.5 133 39.8
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 2.3e-13 79.3 126 68.3
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.1e-12 77.0 133 40.6
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 1.9e-12 76.3 123 62.6
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 5.7e-12 74.7 128 42.2
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 6.3e-11 71.2 126 39.7
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.1e-10 70.5 120 37.5
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 1.1e-10 70.5 136 39.7
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 1.4e-10 70.1 128 38.3
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.8e-10 69.7 135 37.0
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 2.4e-10 69.3 131 38.9
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 2.4e-10 69.3 131 38.9
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 9.1e-10 67.4 125 37.6
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 5.9e-09 64.7 137 37.2
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 1.0e-08 63.9 138 34.8
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 1.7e-08 63.2 125 56.0
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 2.9e-08 62.4 152 35.5
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 6.5e-08 61.2 123 46.3
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 3.2e-07 58.9 115 40.9
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 9.4e-07 57.4 108 44.4
Thecc.03G229800 Theobroma cacao HOM05D007324 ORTHO05D007884 1.2e-06 57.0 127 51.2
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 1.2e-06 57.0 121 51.2
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 2.1e-06 56.2 126 49.2
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.6e-06 55.5 128 32.0
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 3.6e-06 55.5 62 51.6
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 4.7e-06 55.1 128 32.0
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 4.7e-06 55.1 128 32.0


User provided reference genes

Program Settings